Protein–RNA interactions for Protein: P22138

RPA135, DNA-directed RNA polymerase I subunit RPA135, yeastyeast

Known RBP Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA135P22138 TMA7YLR262C-A 195 nt2.38□□□□□ -2.03
RPA135P22138 YML007C-AYML007C-A 111 nt2.38□□□□□ -2.03
RPA135P22138 HDA3YPR179C 1968 nt2.38□□□□□ -2.03
RPA135P22138 SEC26YDR238C 2922 nt2.38□□□□□ -2.03
RPA135P22138 RSE1YML049C 4086 nt2.37□□□□□ -2.03
RPA135P22138 YGR250CYGR250C 2346 nt2.37□□□□□ -2.03
RPA135P22138 YNL338WYNL338W 159 nt2.37□□□□□ -2.03
RPA135P22138 BFA1YJR053W 1725 nt2.37□□□□□ -2.03
RPA135P22138 tC(GCA)BtC(GCA)B 72 nt2.36□□□□□ -2.03
RPA135P22138 tC(GCA)GtC(GCA)G 72 nt2.36□□□□□ -2.03
RPA135P22138 tC(GCA)P1tC(GCA)P1 72 nt2.36□□□□□ -2.03
RPA135P22138 tC(GCA)P2tC(GCA)P2 72 nt2.36□□□□□ -2.03
RPA135P22138 YDR426CYDR426C 378 nt2.36□□□□□ -2.03
RPA135P22138 TRX1YLR043C 312 nt2.36□□□□□ -2.03
RPA135P22138 YMR321CYMR321C 318 nt2.36□□□□□ -2.03
RPA135P22138 YOL019W-AYOL019W-A 153 nt2.36□□□□□ -2.03
RPA135P22138 SNC2YOR327C 348 nt2.36□□□□□ -2.03
RPA135P22138 UBP1YDL122W 2430 nt2.36□□□□□ -2.03
RPA135P22138 MGM1YOR211C 2646 nt2.35□□□□□ -2.03
RPA135P22138 RPL37BYDR500C 267 nt2.35□□□□□ -2.03
RPA135P22138 YER088C-AYER088C-A 324 nt2.35□□□□□ -2.03
RPA135P22138 YNL028WYNL028W 318 nt2.35□□□□□ -2.03
RPA135P22138 ALK2YBL009W 2031 nt2.35□□□□□ -2.03
RPA135P22138 TRA1YHR099W 11235 nt2.35□□□□□ -2.03
RPA135P22138 TRS65YGR166W 1683 nt2.34□□□□□ -2.03
RPA135P22138 LCD1YDR499W 2244 nt2.34□□□□□ -2.03
RPA135P22138 YCR087C-AYCR087C-A 462 nt2.34□□□□□ -2.03
RPA135P22138 YCR102W-AYCR102W-A 198 nt2.34□□□□□ -2.03
RPA135P22138 CSE2YNR010W 450 nt2.34□□□□□ -2.03
RPA135P22138 NEW1YPL226W 3591 nt2.34□□□□□ -2.04
RPA135P22138 INA22YIR024C 651 nt2.33□□□□□ -2.04
RPA135P22138 YBR224WYBR224W 516 nt2.33□□□□□ -2.04
RPA135P22138 NOP53YPL146C 1368 nt2.33□□□□□ -2.04
RPA135P22138 AI5_ALPHAQ0070 1893 nt2.33□□□□□ -2.04
RPA135P22138 ARP8YOR141C 2646 nt2.32□□□□□ -2.04
RPA135P22138 YLR342W-AYLR342W-A 174 nt2.32□□□□□ -2.04
RPA135P22138 COX14YML129C 213 nt2.32□□□□□ -2.04
RPA135P22138 YOR170WYOR170W 306 nt2.32□□□□□ -2.04
RPA135P22138 VMA9YCL005W-A 222 nt2.32□□□□□ -2.04
RPA135P22138 NUM1YDR150W 8247 nt2.32□□□□□ -2.04
RPA135P22138 PEX8YGR077C 1770 nt2.31□□□□□ -2.04
RPA135P22138 PDR1YGL013C 3207 nt2.31□□□□□ -2.04
RPA135P22138 CFT2YLR115W 2580 nt2.31□□□□□ -2.04
RPA135P22138 SSS1YDR086C 243 nt2.31□□□□□ -2.04
RPA135P22138 VPS55YJR044C 423 nt2.31□□□□□ -2.04
RPA135P22138 YPR002C-AYPR002C-A 198 nt2.31□□□□□ -2.04
RPA135P22138 CDC27YBL084C 2277 nt2.31□□□□□ -2.04
RPA135P22138 PRP39YML046W 1890 nt2.31□□□□□ -2.04
RPA135P22138 SPO22YIL073C 2928 nt2.3□□□□□ -2.04
RPA135P22138 MSH6YDR097C 3729 nt2.3□□□□□ -2.04
RPA135P22138 VIK1YPL253C 1944 nt2.3□□□□□ -2.04
RPA135P22138 ZRG8YER033C 3231 nt2.3□□□□□ -2.04
RPA135P22138 YLR140WYLR140W 327 nt2.29□□□□□ -2.04
RPA135P22138 COA4YLR218C 453 nt2.29□□□□□ -2.04
RPA135P22138 YOR055WYOR055W 435 nt2.29□□□□□ -2.04
RPA135P22138 SEF1YBL066C 3447 nt2.29□□□□□ -2.04
RPA135P22138 VTC3YPL019C 2508 nt2.29□□□□□ -2.04
RPA135P22138 SPF1YEL031W 3648 nt2.29□□□□□ -2.04
RPA135P22138 YLR149CYLR149C 2193 nt2.29□□□□□ -2.04
RPA135P22138 PLC1YPL268W 2610 nt2.28□□□□□ -2.04
RPA135P22138 Q0143Q0143 153 nt2.28□□□□□ -2.04
RPA135P22138 RRT15YLR162W-A 189 nt2.28□□□□□ -2.04
RPA135P22138 YNL097C-BYNL097C-B 123 nt2.28□□□□□ -2.04
RPA135P22138 PDE2YOR360C 1581 nt2.27□□□□□ -2.05
RPA135P22138 PXA2YKL188C 2562 nt2.27□□□□□ -2.05
RPA135P22138 SEC63YOR254C 1992 nt2.27□□□□□ -2.05
RPA135P22138 SEY1YOR165W 2331 nt2.27□□□□□ -2.05
RPA135P22138 YNL170WYNL170W 396 nt2.27□□□□□ -2.05
RPA135P22138 VPS34YLR240W 2628 nt2.27□□□□□ -2.05
RPA135P22138 EFR3YMR212C 2349 nt2.26□□□□□ -2.05
RPA135P22138 IRR1YIL026C 3453 nt2.26□□□□□ -2.05
RPA135P22138 BNI1YNL271C 5862 nt2.26□□□□□ -2.05
RPA135P22138 MNL2YLR057W 2550 nt2.26□□□□□ -2.05
RPA135P22138 SCH9YHR205W 2475 nt2.26□□□□□ -2.05
RPA135P22138 DNA2YHR164C 4569 nt2.26□□□□□ -2.05
RPA135P22138 STH1YIL126W 4080 nt2.26□□□□□ -2.05
RPA135P22138 PUT3YKL015W 2940 nt2.25□□□□□ -2.05
RPA135P22138 ATG11YPR049C 3537 nt2.25□□□□□ -2.05
RPA135P22138 MPT5YGL178W 2580 nt2.25□□□□□ -2.05
RPA135P22138 OLI1Q0130 231 nt2.25□□□□□ -2.05
RPA135P22138 MBB1YJL199C 327 nt2.25□□□□□ -2.05
RPA135P22138 VPS54YDR027C 2670 nt2.25□□□□□ -2.05
RPA135P22138 YKU70YMR284W 1809 nt2.25□□□□□ -2.05
RPA135P22138 PTP3YER075C 2787 nt2.25□□□□□ -2.05
RPA135P22138 SSQ1YLR369W 1974 nt2.25□□□□□ -2.05
RPA135P22138 SET2YJL168C 2202 nt2.25□□□□□ -2.05
RPA135P22138 PEP3YLR148W 2757 nt2.24□□□□□ -2.05
RPA135P22138 SVL3YPL032C 2478 nt2.24□□□□□ -2.05
RPA135P22138 SMY1YKL079W 1971 nt2.24□□□□□ -2.05
RPA135P22138 YJL135WYJL135W 318 nt2.24□□□□□ -2.05
RPA135P22138 SKP2YNL311C 2292 nt2.24□□□□□ -2.05
RPA135P22138 YBR184WYBR184W 1572 nt2.23□□□□□ -2.05
RPA135P22138 YBL005W-BYBL005W-B 5268 nt2.23□□□□□ -2.05
RPA135P22138 INP2YMR163C 2118 nt2.23□□□□□ -2.05
RPA135P22138 YEL014CYEL014C 306 nt2.23□□□□□ -2.05
RPA135P22138 YLR146W-AYLR146W-A 189 nt2.23□□□□□ -2.05
RPA135P22138 RPS12YOR369C 432 nt2.23□□□□□ -2.05
RPA135P22138 FKS3YMR306W 5358 nt2.23□□□□□ -2.05
RPA135P22138 VPS13YLL040C 9435 nt2.23□□□□□ -2.05
RPA135P22138 STE11YLR362W 2154 nt2.22□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 52.4 ms