RNA–Protein interactions for RNA: YGR166W

TRS65, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS65, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS65YGR166W FAP1P53971 965 aa11.6□□□□□ -0.55
TRS65YGR166W MTC1P47018 478 aaKnown RBP11.54□□□□□ -0.56
TRS65YGR166W PRY3P47033 881 aa10.92□□□□□ -0.66
TRS65YGR166W AAD16Q02895 342 aa10.38□□□□□ -0.75
TRS65YGR166W PRI1P10363 409 aa10.28□□□□□ -0.76
TRS65YGR166W YCK3P39962 524 aa10.19□□□□□ -0.78
TRS65YGR166W HAA1Q12753 694 aaKnown RBP10.16□□□□□ -0.78
TRS65YGR166W DRS1P32892 752 aaKnown RBP9.82□□□□□ -0.84
TRS65YGR166W ISW2Q08773 1120 aa9.82□□□□□ -0.84
TRS65YGR166W RPG1P38249 964 aaKnown RBP9.74□□□□□ -0.85
TRS65YGR166W TSR3Q12094 313 aaKnown RBP9.71□□□□□ -0.85
TRS65YGR166W MRPL32P25348 183 aa9.34□□□□□ -0.91
TRS65YGR166W YGL015CP33199 130 aa9.22□□□□□ -0.93
TRS65YGR166W DIP2Q12220 943 aaPredicted RBP8.95□□□□□ -0.98
TRS65YGR166W RSE1Q04693 1361 aaKnown RBP8.95□□□□□ -0.98
TRS65YGR166W BUD31P25337 157 aaPredicted RBP8.87□□□□□ -0.99
TRS65YGR166W REB1P21538 810 aa8.81□□□□□ -1
TRS65YGR166W RPL17AP05740 184 aaKnown RBP8.74□□□□□ -1.01
TRS65YGR166W RPL17BP46990 184 aaKnown RBP8.74□□□□□ -1.01
TRS65YGR166W CDC27P38042 758 aa8.65□□□□□ -1.02
TRS65YGR166W UBP10P53874 792 aaPredicted RBP8.53□□□□□ -1.04
TRS65YGR166W MAP2P38174 421 aaKnown RBP8.52□□□□□ -1.05
TRS65YGR166W SIS1P25294 352 aaKnown RBP8.4□□□□□ -1.06
TRS65YGR166W YKR023WP36119 530 aaKnown RBP8.38□□□□□ -1.07
TRS65YGR166W AVT3P36062 692 aa8.31□□□□□ -1.08
TRS65YGR166W UBP9P39967 754 aa8.27□□□□□ -1.09
TRS65YGR166W HOP09932 586 aa8.25□□□□□ -1.09
TRS65YGR166W DCD1P06773 312 aa8.24□□□□□ -1.09
TRS65YGR166W SPT21P35209 758 aa8.22□□□□□ -1.09
TRS65YGR166W TIF4632P39936 914 aaKnown RBP8.22□□□□□ -1.09
TRS65YGR166W TFC8Q12308 588 aa8.21□□□□□ -1.09
TRS65YGR166W SCY1P53009 804 aa8.18□□□□□ -1.1
TRS65YGR166W TGL3P40308 642 aa8.18□□□□□ -1.1
TRS65YGR166W SLX5P32828 619 aaKnown RBP8.14□□□□□ -1.11
TRS65YGR166W BCH2P36122 765 aa7.91□□□□□ -1.14
TRS65YGR166W YBL029C-AQ3E756 94 aa7.77□□□□□ -1.17
TRS65YGR166W RIM101P33400 625 aa7.73□□□□□ -1.17
TRS65YGR166W BFR2Q06631 534 aaKnown RBP7.7□□□□□ -1.18
TRS65YGR166W MST1P07236 462 aa7.68□□□□□ -1.18
TRS65YGR166W YOR238WQ08634 303 aa7.67□□□□□ -1.18
TRS65YGR166W EPS1P40557 701 aa7.65□□□□□ -1.18
TRS65YGR166W BDF1P35817 686 aa7.64□□□□□ -1.19
TRS65YGR166W VNX1P42839 908 aa7.63□□□□□ -1.19
TRS65YGR166W SPP1Q03012 353 aa7.59□□□□□ -1.19
TRS65YGR166W YJL171CP46992 396 aa7.54□□□□□ -1.2
TRS65YGR166W WSC3Q12215 556 aa7.54□□□□□ -1.2
TRS65YGR166W AIR2Q12476 344 aaKnown RBP7.49□□□□□ -1.21
TRS65YGR166W NSR1P27476 414 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
TRS65YGR166W YAP5P40574 245 aa7.46□□□□□ -1.22
TRS65YGR166W OXP1P28273 1286 aa7.44□□□□□ -1.22
TRS65YGR166W FKH1P40466 484 aa7.44□□□□□ -1.22
TRS65YGR166W TIF11P38912 153 aaKnown RBP7.43□□□□□ -1.22
TRS65YGR166W PTP3P40048 928 aa7.43□□□□□ -1.22
TRS65YGR166W YIL055CP40523 627 aaKnown RBP7.39□□□□□ -1.23
TRS65YGR166W GTT3P39996 337 aa7.38□□□□□ -1.23
TRS65YGR166W BBC1P47068 1157 aa7.36□□□□□ -1.23
TRS65YGR166W BMT6Q12291 365 aa7.33□□□□□ -1.24
TRS65YGR166W LDB19Q12502 818 aa7.32□□□□□ -1.24
TRS65YGR166W ULI1P43604 169 aa7.28□□□□□ -1.24
TRS65YGR166W AI2P03876 854 aa7.27□□□□□ -1.25
TRS65YGR166W RSM7P47150 247 aa7.25□□□□□ -1.25
TRS65YGR166W IOC2Q12072 812 aa7.24□□□□□ -1.25
TRS65YGR166W PIB1Q06651 286 aa7.19□□□□□ -1.26
TRS65YGR166W YAH1Q12184 172 aaKnown RBP7.15□□□□□ -1.27
TRS65YGR166W RTG1P32607 177 aa7.11□□□□□ -1.27
TRS65YGR166W EAP1P36041 632 aaKnown RBP7.1□□□□□ -1.27
TRS65YGR166W MSB4Q12317 492 aa7.09□□□□□ -1.27
TRS65YGR166W NCR1Q12200 1170 aa7.08□□□□□ -1.28
TRS65YGR166W SET4P42948 560 aa7.04□□□□□ -1.28
TRS65YGR166W TRP5P00931 707 aaKnown RBP7.03□□□□□ -1.28
TRS65YGR166W YOL036WQ08206 761 aa7.02□□□□□ -1.29
TRS65YGR166W YNL035CP53962 389 aaKnown RBP7□□□□□ -1.29
TRS65YGR166W SEC61P32915 480 aa6.98□□□□□ -1.29
TRS65YGR166W MRM1P25270 412 aa6.96□□□□□ -1.29
TRS65YGR166W TFG1P41895 735 aaPredicted RBP6.95□□□□□ -1.3
TRS65YGR166W BCK2P33306 851 aa6.93□□□□□ -1.3
TRS65YGR166W PSD2P53037 1138 aaKnown RBP6.93□□□□□ -1.3
TRS65YGR166W YLR271WQ06152 274 aa6.93□□□□□ -1.3
TRS65YGR166W SAP30P38429 201 aa6.9□□□□□ -1.3
TRS65YGR166W DBP1P24784 617 aaKnown RBP6.87□□□□□ -1.31
TRS65YGR166W YMR1P47147 688 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
TRS65YGR166W CHL1P22516 861 aaPredicted RBP6.85□□□□□ -1.31
TRS65YGR166W YFR006WP43590 535 aa6.85□□□□□ -1.31
TRS65YGR166W VMA1P17255 1071 aaKnown RBP6.84□□□□□ -1.32
TRS65YGR166W YDL129WQ07555 291 aa6.81□□□□□ -1.32
TRS65YGR166W SAM3Q08986 587 aa6.81□□□□□ -1.32
TRS65YGR166W PRE3P38624 215 aa6.8□□□□□ -1.32
TRS65YGR166W DAN4P47179 1161 aa6.8□□□□□ -1.32
TRS65YGR166W VPS29P38759 282 aa6.79□□□□□ -1.32
TRS65YGR166W JIP4Q03361 876 aa6.79□□□□□ -1.32
TRS65YGR166W STS1P38637 319 aa6.76□□□□□ -1.33
TRS65YGR166W RTG3P38165 486 aa6.74□□□□□ -1.33
TRS65YGR166W ABP1P15891 592 aaKnown RBP6.71□□□□□ -1.34
TRS65YGR166W VRP1P37370 817 aa6.71□□□□□ -1.34
TRS65YGR166W XDJ1P39102 459 aa6.71□□□□□ -1.34
TRS65YGR166W GYP5Q12344 894 aa6.71□□□□□ -1.34
TRS65YGR166W HTA1P04911 132 aaKnown RBP6.7□□□□□ -1.34
TRS65YGR166W HTA2P04912 132 aa6.7□□□□□ -1.34
TRS65YGR166W DCW1P36091 449 aa6.69□□□□□ -1.34
TRS65YGR166W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms