RNA–Protein interactions for RNA: YGR077C

PEX8, Transcript of Intraperoxisomal organizer of the peroxisomal import machinery, yeastyeast

Gene PEX8, Length 1,770 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX8YGR077C FAP1P53971 965 aa9.59□□□□□ -0.87
PEX8YGR077C MTC1P47018 478 aaKnown RBP9.5□□□□□ -0.89
PEX8YGR077C PRY3P47033 881 aa9.04□□□□□ -0.96
PEX8YGR077C AAD16Q02895 342 aa8.59□□□□□ -1.03
PEX8YGR077C PRI1P10363 409 aa8.5□□□□□ -1.05
PEX8YGR077C YCK3P39962 524 aa8.45□□□□□ -1.06
PEX8YGR077C HAA1Q12753 694 aaKnown RBP8.43□□□□□ -1.06
PEX8YGR077C ISW2Q08773 1120 aa8.1□□□□□ -1.11
PEX8YGR077C RPG1P38249 964 aaKnown RBP8.04□□□□□ -1.12
PEX8YGR077C TSR3Q12094 313 aaKnown RBP8.02□□□□□ -1.13
PEX8YGR077C DRS1P32892 752 aaKnown RBP8.02□□□□□ -1.13
PEX8YGR077C MRPL32P25348 183 aa7.72□□□□□ -1.17
PEX8YGR077C YGL015CP33199 130 aa7.64□□□□□ -1.19
PEX8YGR077C RSE1Q04693 1361 aaKnown RBP7.37□□□□□ -1.23
PEX8YGR077C BUD31P25337 157 aaPredicted RBP7.36□□□□□ -1.23
PEX8YGR077C DIP2Q12220 943 aaPredicted RBP7.34□□□□□ -1.23
PEX8YGR077C REB1P21538 810 aa7.24□□□□□ -1.25
PEX8YGR077C RPL17AP05740 184 aaKnown RBP7.19□□□□□ -1.26
PEX8YGR077C RPL17BP46990 184 aaKnown RBP7.19□□□□□ -1.26
PEX8YGR077C CDC27P38042 758 aa7.15□□□□□ -1.27
PEX8YGR077C UBP10P53874 792 aaPredicted RBP7.05□□□□□ -1.28
PEX8YGR077C MAP2P38174 421 aaKnown RBP7.03□□□□□ -1.28
PEX8YGR077C SIS1P25294 352 aaKnown RBP6.98□□□□□ -1.29
PEX8YGR077C YKR023WP36119 530 aaKnown RBP6.9□□□□□ -1.31
PEX8YGR077C UBP9P39967 754 aa6.85□□□□□ -1.31
PEX8YGR077C AVT3P36062 692 aa6.8□□□□□ -1.32
PEX8YGR077C HOP09932 586 aa6.79□□□□□ -1.32
PEX8YGR077C TIF4632P39936 914 aaKnown RBP6.79□□□□□ -1.32
PEX8YGR077C DCD1P06773 312 aa6.77□□□□□ -1.33
PEX8YGR077C TGL3P40308 642 aa6.77□□□□□ -1.33
PEX8YGR077C SPT21P35209 758 aa6.76□□□□□ -1.33
PEX8YGR077C TFC8Q12308 588 aa6.76□□□□□ -1.33
PEX8YGR077C SCY1P53009 804 aa6.74□□□□□ -1.33
PEX8YGR077C SLX5P32828 619 aaKnown RBP6.71□□□□□ -1.34
PEX8YGR077C BCH2P36122 765 aa6.5□□□□□ -1.37
PEX8YGR077C YBL029C-AQ3E756 94 aa6.41□□□□□ -1.38
PEX8YGR077C RIM101P33400 625 aa6.35□□□□□ -1.39
PEX8YGR077C MST1P07236 462 aa6.34□□□□□ -1.39
PEX8YGR077C YOR238WQ08634 303 aa6.33□□□□□ -1.4
PEX8YGR077C VNX1P42839 908 aa6.3□□□□□ -1.4
PEX8YGR077C EPS1P40557 701 aa6.29□□□□□ -1.4
PEX8YGR077C BDF1P35817 686 aa6.28□□□□□ -1.4
PEX8YGR077C SPP1Q03012 353 aa6.26□□□□□ -1.41
PEX8YGR077C BFR2Q06631 534 aaKnown RBP6.26□□□□□ -1.41
PEX8YGR077C YJL171CP46992 396 aa6.23□□□□□ -1.41
PEX8YGR077C WSC3Q12215 556 aa6.22□□□□□ -1.41
PEX8YGR077C AIR2Q12476 344 aaKnown RBP6.21□□□□□ -1.42
PEX8YGR077C NSR1P27476 414 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
PEX8YGR077C FKH1P40466 484 aa6.16□□□□□ -1.42
PEX8YGR077C YAP5P40574 245 aa6.15□□□□□ -1.43
PEX8YGR077C TIF11P38912 153 aaKnown RBP6.13□□□□□ -1.43
PEX8YGR077C OXP1P28273 1286 aa6.11□□□□□ -1.43
PEX8YGR077C PTP3P40048 928 aa6.09□□□□□ -1.43
PEX8YGR077C GTT3P39996 337 aa6.08□□□□□ -1.44
PEX8YGR077C YIL055CP40523 627 aaKnown RBP6.06□□□□□ -1.44
PEX8YGR077C BMT6Q12291 365 aa6.06□□□□□ -1.44
PEX8YGR077C BBC1P47068 1157 aa6.04□□□□□ -1.44
PEX8YGR077C LDB19Q12502 818 aa6.03□□□□□ -1.44
PEX8YGR077C ULI1P43604 169 aa6.02□□□□□ -1.45
PEX8YGR077C IOC2Q12072 812 aa5.98□□□□□ -1.45
PEX8YGR077C AI2P03876 854 aa5.97□□□□□ -1.45
PEX8YGR077C RSM7P47150 247 aa5.96□□□□□ -1.46
PEX8YGR077C PIB1Q06651 286 aa5.9□□□□□ -1.47
PEX8YGR077C RTG1P32607 177 aa5.87□□□□□ -1.47
PEX8YGR077C EAP1P36041 632 aaKnown RBP5.86□□□□□ -1.47
PEX8YGR077C MSB4Q12317 492 aa5.85□□□□□ -1.47
PEX8YGR077C YAH1Q12184 172 aaKnown RBP5.85□□□□□ -1.47
PEX8YGR077C NCR1Q12200 1170 aa5.85□□□□□ -1.47
PEX8YGR077C TRP5P00931 707 aaKnown RBP5.8□□□□□ -1.48
PEX8YGR077C SET4P42948 560 aa5.79□□□□□ -1.48
PEX8YGR077C YOL036WQ08206 761 aa5.78□□□□□ -1.48
PEX8YGR077C YNL035CP53962 389 aaKnown RBP5.78□□□□□ -1.48
PEX8YGR077C SEC61P32915 480 aa5.76□□□□□ -1.49
PEX8YGR077C BCK2P33306 851 aa5.74□□□□□ -1.49
PEX8YGR077C TFG1P41895 735 aaPredicted RBP5.73□□□□□ -1.49
PEX8YGR077C MRM1P25270 412 aa5.71□□□□□ -1.5
PEX8YGR077C SAP30P38429 201 aa5.69□□□□□ -1.5
PEX8YGR077C PSD2P53037 1138 aaKnown RBP5.67□□□□□ -1.5
PEX8YGR077C YLR271WQ06152 274 aa5.67□□□□□ -1.5
PEX8YGR077C CHL1P22516 861 aaPredicted RBP5.66□□□□□ -1.5
PEX8YGR077C DBP1P24784 617 aaKnown RBP5.63□□□□□ -1.51
PEX8YGR077C YMR1P47147 688 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
PEX8YGR077C YFR006WP43590 535 aa5.62□□□□□ -1.51
PEX8YGR077C VMA1P17255 1071 aaKnown RBP5.62□□□□□ -1.51
PEX8YGR077C YDL129WQ07555 291 aa5.62□□□□□ -1.51
PEX8YGR077C PRE3P38624 215 aa5.61□□□□□ -1.51
PEX8YGR077C SAM3Q08986 587 aa5.61□□□□□ -1.51
PEX8YGR077C TFA1P36100 482 aa5.6□□□□□ -1.51
PEX8YGR077C DAN4P47179 1161 aa5.6□□□□□ -1.51
PEX8YGR077C JIP4Q03361 876 aa5.6□□□□□ -1.51
PEX8YGR077C VPS29P38759 282 aa5.58□□□□□ -1.52
PEX8YGR077C STS1P38637 319 aa5.55□□□□□ -1.52
PEX8YGR077C XDJ1P39102 459 aa5.55□□□□□ -1.52
PEX8YGR077C VRP1P37370 817 aa5.53□□□□□ -1.52
PEX8YGR077C RTG3P38165 486 aa5.53□□□□□ -1.52
PEX8YGR077C ABP1P15891 592 aaKnown RBP5.52□□□□□ -1.53
PEX8YGR077C GYP5Q12344 894 aa5.52□□□□□ -1.53
PEX8YGR077C HTA1P04911 132 aaKnown RBP5.51□□□□□ -1.53
PEX8YGR077C HTA2P04912 132 aa5.51□□□□□ -1.53
PEX8YGR077C DCW1P36091 449 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms