RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C DRS1P32892 752 aaKnown RBP4.66□□□□□ -1.66
MSH6YDR097C MON2P48563 1636 aaPredicted RBP4.36□□□□□ -1.71
MSH6YDR097C BFR2Q06631 534 aaKnown RBP4.21□□□□□ -1.74
MSH6YDR097C FAP1P53971 965 aa4.2□□□□□ -1.74
MSH6YDR097C MTC1P47018 478 aaKnown RBP4.19□□□□□ -1.74
MSH6YDR097C TFA1P36100 482 aa3.95□□□□□ -1.78
MSH6YDR097C PRY3P47033 881 aa3.92□□□□□ -1.78
MSH6YDR097C RQC2Q12532 1038 aaKnown RBP3.84□□□□□ -1.79
MSH6YDR097C KOG1P38873 1557 aa3.8□□□□□ -1.8
MSH6YDR097C SPA2P23201 1466 aaKnown RBP3.76□□□□□ -1.81
MSH6YDR097C DIP2Q12220 943 aaPredicted RBP3.75□□□□□ -1.81
MSH6YDR097C DNA2P38859 1522 aa3.71□□□□□ -1.82
MSH6YDR097C INO80P53115 1489 aa3.69□□□□□ -1.82
MSH6YDR097C DMA1P38823 416 aa3.64□□□□□ -1.83
MSH6YDR097C SWR1Q05471 1514 aa3.63□□□□□ -1.83
MSH6YDR097C AVT3P36062 692 aa3.62□□□□□ -1.83
MSH6YDR097C AAD16Q02895 342 aa3.61□□□□□ -1.83
MSH6YDR097C PTP3P40048 928 aa3.59□□□□□ -1.84
MSH6YDR097C TY1B-DR4Q07793 1604 aa3.55□□□□□ -1.84
MSH6YDR097C RPG1P38249 964 aaKnown RBP3.52□□□□□ -1.85
MSH6YDR097C TSR3Q12094 313 aaKnown RBP3.52□□□□□ -1.85
MSH6YDR097C YCK3P39962 524 aa3.52□□□□□ -1.85
MSH6YDR097C PRI1P10363 409 aa3.5□□□□□ -1.85
MSH6YDR097C RSE1Q04693 1361 aaKnown RBP3.5□□□□□ -1.85
MSH6YDR097C TAF7Q05021 590 aa3.5□□□□□ -1.85
MSH6YDR097C ISW2Q08773 1120 aa3.5□□□□□ -1.85
MSH6YDR097C MIF2P35201 549 aa3.49□□□□□ -1.85
MSH6YDR097C HAA1Q12753 694 aaKnown RBP3.44□□□□□ -1.86
MSH6YDR097C IRC20Q06554 1556 aa3.44□□□□□ -1.86
MSH6YDR097C RPL17AP05740 184 aaKnown RBP3.38□□□□□ -1.87
MSH6YDR097C RPL17BP46990 184 aaKnown RBP3.38□□□□□ -1.87
MSH6YDR097C YAH1Q12184 172 aaKnown RBP3.38□□□□□ -1.87
MSH6YDR097C MYO2P19524 1574 aaKnown RBP3.38□□□□□ -1.87
MSH6YDR097C DNF1P32660 1571 aa3.35□□□□□ -1.87
MSH6YDR097C THO2P53552 1597 aaKnown RBP3.35□□□□□ -1.87
MSH6YDR097C PEP1P32319 1579 aa3.34□□□□□ -1.87
MSH6YDR097C MRPL32P25348 183 aa3.34□□□□□ -1.88
MSH6YDR097C REB1P21538 810 aa3.33□□□□□ -1.88
MSH6YDR097C REV3P14284 1504 aa3.33□□□□□ -1.88
MSH6YDR097C SSK2P53599 1579 aa3.29□□□□□ -1.88
MSH6YDR097C MDS3P53094 1487 aa3.29□□□□□ -1.88
MSH6YDR097C BNI1P41832 1953 aa3.29□□□□□ -1.88
MSH6YDR097C TCB3Q03640 1545 aaKnown RBP3.29□□□□□ -1.88
MSH6YDR097C SSP1P38871 571 aa3.22□□□□□ -1.89
MSH6YDR097C DMA2P53924 522 aa3.22□□□□□ -1.89
MSH6YDR097C YIL055CP40523 627 aaKnown RBP3.2□□□□□ -1.9
MSH6YDR097C LEO1P38439 464 aa3.19□□□□□ -1.9
MSH6YDR097C ESC1Q03661 1658 aaKnown RBP3.18□□□□□ -1.9
MSH6YDR097C YOR093CQ12275 1648 aa3.17□□□□□ -1.9
MSH6YDR097C SPT21P35209 758 aa3.17□□□□□ -1.9
MSH6YDR097C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.15□□□□□ -1.9not detected
MSH6YDR097C SPB4P25808 606 aaPredicted RBP3.15□□□□□ -1.91
MSH6YDR097C LTE1P07866 1435 aa3.14□□□□□ -1.91
MSH6YDR097C CDC27P38042 758 aa3.14□□□□□ -1.91
MSH6YDR097C DCD1P06773 312 aa3.14□□□□□ -1.91
MSH6YDR097C YKR023WP36119 530 aaKnown RBP3.13□□□□□ -1.91
MSH6YDR097C YGL015CP33199 130 aa3.13□□□□□ -1.91
MSH6YDR097C RPA190P10964 1664 aaKnown RBP3.13□□□□□ -1.91
MSH6YDR097C RIM101P33400 625 aa3.12□□□□□ -1.91
MSH6YDR097C MET5P47169 1442 aa3.11□□□□□ -1.91
MSH6YDR097C CDC25P04821 1589 aa3.11□□□□□ -1.91
MSH6YDR097C HIR3P47171 1648 aa3.1□□□□□ -1.91
MSH6YDR097C YFR006WP43590 535 aa3.1□□□□□ -1.91
MSH6YDR097C HOP09932 586 aa3.09□□□□□ -1.92
MSH6YDR097C DNF2Q12675 1612 aa3.08□□□□□ -1.92
MSH6YDR097C OXP1P28273 1286 aa3.07□□□□□ -1.92
MSH6YDR097C SAS10Q12136 610 aaPredicted RBP3.07□□□□□ -1.92
MSH6YDR097C YLR271WQ06152 274 aa3.07□□□□□ -1.92
MSH6YDR097C VPS70P47161 811 aa3.06□□□□□ -1.92
MSH6YDR097C CST9Q06032 482 aa3.06□□□□□ -1.92
MSH6YDR097C NTE1Q04958 1679 aa3.04□□□□□ -1.92
MSH6YDR097C PDR15Q04182 1529 aaKnown RBP3.04□□□□□ -1.92
MSH6YDR097C RPO31P04051 1460 aa3.04□□□□□ -1.92
MSH6YDR097C MAP2P38174 421 aaKnown RBP3.03□□□□□ -1.92
MSH6YDR097C BPT1P14772 1559 aa3.03□□□□□ -1.92
MSH6YDR097C YCF1P39109 1515 aaKnown RBP3.03□□□□□ -1.92
MSH6YDR097C TFC8Q12308 588 aa3.02□□□□□ -1.93
MSH6YDR097C LEU3P08638 886 aa3.01□□□□□ -1.93
MSH6YDR097C RSM7P47150 247 aa3.01□□□□□ -1.93
MSH6YDR097C SCY1P53009 804 aa3.01□□□□□ -1.93
MSH6YDR097C RPN1P38764 993 aaKnown RBP3□□□□□ -1.93
MSH6YDR097C MGA2P40578 1113 aa3□□□□□ -1.93
MSH6YDR097C BUD4P47136 1447 aa2.99□□□□□ -1.93
MSH6YDR097C ATG2P53855 1592 aa2.98□□□□□ -1.93
MSH6YDR097C GLC3P32775 704 aa2.96□□□□□ -1.94
MSH6YDR097C BCH2P36122 765 aa2.96□□□□□ -1.94
MSH6YDR097C ABP1P15891 592 aaKnown RBP2.95□□□□□ -1.94
MSH6YDR097C MRM1P25270 412 aa2.95□□□□□ -1.94
MSH6YDR097C SET1P38827 1080 aaKnown RBP2.95□□□□□ -1.94
MSH6YDR097C RKR1Q04781 1562 aa2.95□□□□□ -1.94
MSH6YDR097C HSL1P34244 1518 aa2.95□□□□□ -1.94
MSH6YDR097C RCR1P38212 213 aa2.94□□□□□ -1.94
MSH6YDR097C RLF2Q12495 606 aa2.94□□□□□ -1.94
MSH6YDR097C AI2P03876 854 aa2.94□□□□□ -1.94
MSH6YDR097C SIS1P25294 352 aaKnown RBP2.93□□□□□ -1.94
MSH6YDR097C KIN1P13185 1064 aa2.92□□□□□ -1.94
MSH6YDR097C RAM2P29703 316 aa2.91□□□□□ -1.94
MSH6YDR097C YPR148CQ06523 435 aa2.91□□□□□ -1.94
MSH6YDR097C SLX5P32828 619 aaKnown RBP2.91□□□□□ -1.94
MSH6YDR097C BBC1P47068 1157 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms