RNA–Protein interactions for RNA: YMR284W

YKU70, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeastyeast

Gene YKU70, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKU70YMR284W FAP1P53971 965 aa11.29□□□□□ -0.6
YKU70YMR284W MTC1P47018 478 aaKnown RBP11.16□□□□□ -0.62
YKU70YMR284W PRY3P47033 881 aa10.63□□□□□ -0.71
YKU70YMR284W AAD16Q02895 342 aa10.12□□□□□ -0.79
YKU70YMR284W PRI1P10363 409 aa10□□□□□ -0.81
YKU70YMR284W HAA1Q12753 694 aaKnown RBP9.96□□□□□ -0.81
YKU70YMR284W YCK3P39962 524 aa9.87□□□□□ -0.83
YKU70YMR284W ISW2Q08773 1120 aa9.54□□□□□ -0.88
YKU70YMR284W RPG1P38249 964 aaKnown RBP9.42□□□□□ -0.9
YKU70YMR284W TSR3Q12094 313 aaKnown RBP9.4□□□□□ -0.91
YKU70YMR284W DRS1P32892 752 aaKnown RBP9.38□□□□□ -0.91
YKU70YMR284W MRPL32P25348 183 aa9.1□□□□□ -0.95
YKU70YMR284W YGL015CP33199 130 aa9.03□□□□□ -0.96
YKU70YMR284W BUD31P25337 157 aaPredicted RBP8.7□□□□□ -1.02
YKU70YMR284W RSE1Q04693 1361 aaKnown RBP8.65□□□□□ -1.02
YKU70YMR284W DIP2Q12220 943 aaPredicted RBP8.6□□□□□ -1.03
YKU70YMR284W REB1P21538 810 aa8.52□□□□□ -1.05
YKU70YMR284W RPL17AP05740 184 aaKnown RBP8.43□□□□□ -1.06
YKU70YMR284W RPL17BP46990 184 aaKnown RBP8.43□□□□□ -1.06
YKU70YMR284W CDC27P38042 758 aa8.36□□□□□ -1.07
YKU70YMR284W UBP10P53874 792 aaPredicted RBP8.33□□□□□ -1.08
YKU70YMR284W SIS1P25294 352 aaKnown RBP8.24□□□□□ -1.09
YKU70YMR284W MAP2P38174 421 aaKnown RBP8.24□□□□□ -1.09
YKU70YMR284W UBP9P39967 754 aa8.13□□□□□ -1.11
YKU70YMR284W YKR023WP36119 530 aaKnown RBP8.08□□□□□ -1.12
YKU70YMR284W TIF4632P39936 914 aaKnown RBP8.05□□□□□ -1.12
YKU70YMR284W TGL3P40308 642 aa7.99□□□□□ -1.13
YKU70YMR284W AVT3P36062 692 aa7.95□□□□□ -1.14
YKU70YMR284W TFC8Q12308 588 aa7.94□□□□□ -1.14
YKU70YMR284W HOP09932 586 aa7.93□□□□□ -1.14
YKU70YMR284W SPT21P35209 758 aa7.92□□□□□ -1.14
YKU70YMR284W SCY1P53009 804 aa7.91□□□□□ -1.14
YKU70YMR284W SLX5P32828 619 aaKnown RBP7.9□□□□□ -1.14
YKU70YMR284W DCD1P06773 312 aa7.89□□□□□ -1.15
YKU70YMR284W BCH2P36122 765 aa7.62□□□□□ -1.19
YKU70YMR284W YBL029C-AQ3E756 94 aa7.53□□□□□ -1.2
YKU70YMR284W MST1P07236 462 aa7.49□□□□□ -1.21
YKU70YMR284W YOR238WQ08634 303 aa7.47□□□□□ -1.21
YKU70YMR284W RIM101P33400 625 aa7.43□□□□□ -1.22
YKU70YMR284W VNX1P42839 908 aa7.42□□□□□ -1.22
YKU70YMR284W YJL171CP46992 396 aa7.39□□□□□ -1.23
YKU70YMR284W SPP1Q03012 353 aa7.39□□□□□ -1.23
YKU70YMR284W EPS1P40557 701 aa7.38□□□□□ -1.23
YKU70YMR284W BDF1P35817 686 aa7.36□□□□□ -1.23
YKU70YMR284W NSR1P27476 414 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
YKU70YMR284W BFR2Q06631 534 aaKnown RBP7.31□□□□□ -1.24
YKU70YMR284W AIR2Q12476 344 aaKnown RBP7.31□□□□□ -1.24
YKU70YMR284W WSC3Q12215 556 aa7.29□□□□□ -1.24
YKU70YMR284W FKH1P40466 484 aa7.27□□□□□ -1.25
YKU70YMR284W YAP5P40574 245 aa7.26□□□□□ -1.25
YKU70YMR284W TIF11P38912 153 aaKnown RBP7.24□□□□□ -1.25
YKU70YMR284W GTT3P39996 337 aa7.17□□□□□ -1.26
YKU70YMR284W BMT6Q12291 365 aa7.17□□□□□ -1.26
YKU70YMR284W PTP3P40048 928 aa7.14□□□□□ -1.27
YKU70YMR284W BBC1P47068 1157 aa7.13□□□□□ -1.27
YKU70YMR284W YIL055CP40523 627 aaKnown RBP7.13□□□□□ -1.27
YKU70YMR284W OXP1P28273 1286 aa7.12□□□□□ -1.27
YKU70YMR284W LDB19Q12502 818 aa7.11□□□□□ -1.27
YKU70YMR284W ULI1P43604 169 aa7.08□□□□□ -1.28
YKU70YMR284W IOC2Q12072 812 aa7.03□□□□□ -1.28
YKU70YMR284W AI2P03876 854 aa6.99□□□□□ -1.29
YKU70YMR284W RSM7P47150 247 aa6.99□□□□□ -1.29
YKU70YMR284W EAP1P36041 632 aaKnown RBP6.95□□□□□ -1.3
YKU70YMR284W MSB4Q12317 492 aa6.94□□□□□ -1.3
YKU70YMR284W RTG1P32607 177 aa6.91□□□□□ -1.3
YKU70YMR284W NCR1Q12200 1170 aa6.9□□□□□ -1.31
YKU70YMR284W PIB1Q06651 286 aa6.89□□□□□ -1.31
YKU70YMR284W SEC61P32915 480 aa6.83□□□□□ -1.32
YKU70YMR284W TRP5P00931 707 aaKnown RBP6.82□□□□□ -1.32
YKU70YMR284W YNL035CP53962 389 aaKnown RBP6.82□□□□□ -1.32
YKU70YMR284W YAH1Q12184 172 aaKnown RBP6.81□□□□□ -1.32
YKU70YMR284W TFG1P41895 735 aaPredicted RBP6.8□□□□□ -1.32
YKU70YMR284W SET4P42948 560 aa6.8□□□□□ -1.32
YKU70YMR284W BCK2P33306 851 aa6.79□□□□□ -1.32
YKU70YMR284W YOL036WQ08206 761 aa6.79□□□□□ -1.32
YKU70YMR284W CHL1P22516 861 aaPredicted RBP6.7□□□□□ -1.34
YKU70YMR284W SAP30P38429 201 aa6.69□□□□□ -1.34
YKU70YMR284W MRM1P25270 412 aa6.68□□□□□ -1.34
YKU70YMR284W PSD2P53037 1138 aaKnown RBP6.65□□□□□ -1.34
YKU70YMR284W YDL129WQ07555 291 aa6.64□□□□□ -1.35
YKU70YMR284W PRE3P38624 215 aa6.63□□□□□ -1.35
YKU70YMR284W YMR1P47147 688 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
YKU70YMR284W JIP4Q03361 876 aa6.63□□□□□ -1.35
YKU70YMR284W YLR271WQ06152 274 aa6.62□□□□□ -1.35
YKU70YMR284W DBP1P24784 617 aaKnown RBP6.61□□□□□ -1.35
YKU70YMR284W SAM3Q08986 587 aa6.61□□□□□ -1.35
YKU70YMR284W VMA1P17255 1071 aaKnown RBP6.6□□□□□ -1.35
YKU70YMR284W DAN4P47179 1161 aa6.59□□□□□ -1.35
YKU70YMR284W XDJ1P39102 459 aa6.57□□□□□ -1.36
YKU70YMR284W ABP1P15891 592 aaKnown RBP6.57□□□□□ -1.36
YKU70YMR284W YFR006WP43590 535 aa6.56□□□□□ -1.36
YKU70YMR284W VRP1P37370 817 aa6.53□□□□□ -1.36
YKU70YMR284W VPS29P38759 282 aa6.53□□□□□ -1.36
YKU70YMR284W RGA2Q06407 1009 aa6.53□□□□□ -1.36
YKU70YMR284W HTA1P04911 132 aaKnown RBP6.5□□□□□ -1.37
YKU70YMR284W HTA2P04912 132 aa6.5□□□□□ -1.37
YKU70YMR284W GYP5Q12344 894 aa6.5□□□□□ -1.37
YKU70YMR284W RTG3P38165 486 aa6.49□□□□□ -1.37
YKU70YMR284W DPS1P04802 557 aaKnown RBP6.48□□□□□ -1.37
YKU70YMR284W PTC4P38089 393 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 1006.2 ms