RNA–Protein interactions for RNA: YLR148W

PEP3, Transcript of Component of CORVET membrane tethering complex, yeastyeast

Gene PEP3, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP3YLR148W MTC1P47018 478 aaKnown RBP7.2□□□□□ -1.26
PEP3YLR148W FAP1P53971 965 aa6.84□□□□□ -1.31
PEP3YLR148W DRS1P32892 752 aaKnown RBP6.56□□□□□ -1.36
PEP3YLR148W PRY3P47033 881 aa6.39□□□□□ -1.39
PEP3YLR148W AAD16Q02895 342 aa6.22□□□□□ -1.41
PEP3YLR148W PRI1P10363 409 aa6.17□□□□□ -1.42
PEP3YLR148W ISW2Q08773 1120 aa6.11□□□□□ -1.43
PEP3YLR148W HAA1Q12753 694 aaKnown RBP6□□□□□ -1.45
PEP3YLR148W RPG1P38249 964 aaKnown RBP5.98□□□□□ -1.45
PEP3YLR148W TSR3Q12094 313 aaKnown RBP5.85□□□□□ -1.47
PEP3YLR148W DIP2Q12220 943 aaPredicted RBP5.81□□□□□ -1.48
PEP3YLR148W YCK3P39962 524 aa5.79□□□□□ -1.48
PEP3YLR148W RSE1Q04693 1361 aaKnown RBP5.71□□□□□ -1.49
PEP3YLR148W MRPL32P25348 183 aa5.7□□□□□ -1.5
PEP3YLR148W BFR2Q06631 534 aaKnown RBP5.59□□□□□ -1.51
PEP3YLR148W REB1P21538 810 aa5.59□□□□□ -1.52
PEP3YLR148W RPL17AP05740 184 aaKnown RBP5.53□□□□□ -1.52
PEP3YLR148W RPL17BP46990 184 aaKnown RBP5.53□□□□□ -1.52
PEP3YLR148W YGL015CP33199 130 aa5.51□□□□□ -1.53
PEP3YLR148W AVT3P36062 692 aa5.46□□□□□ -1.54
PEP3YLR148W TFA1P36100 482 aa5.32□□□□□ -1.56
PEP3YLR148W CDC27P38042 758 aa5.24□□□□□ -1.57
PEP3YLR148W UBP10P53874 792 aaPredicted RBP5.21□□□□□ -1.58
PEP3YLR148W YKR023WP36119 530 aaKnown RBP5.16□□□□□ -1.58
PEP3YLR148W SPT21P35209 758 aa5.16□□□□□ -1.58
PEP3YLR148W MAP2P38174 421 aaKnown RBP5.14□□□□□ -1.59
PEP3YLR148W HOP09932 586 aa5.11□□□□□ -1.59
PEP3YLR148W TFC8Q12308 588 aa5.1□□□□□ -1.59
PEP3YLR148W BUD31P25337 157 aaPredicted RBP5.08□□□□□ -1.6
PEP3YLR148W TIF4632P39936 914 aaKnown RBP5.07□□□□□ -1.6
PEP3YLR148W DCD1P06773 312 aa5.06□□□□□ -1.6
PEP3YLR148W SCY1P53009 804 aa5.04□□□□□ -1.6
PEP3YLR148W SLX5P32828 619 aaKnown RBP5.02□□□□□ -1.61
PEP3YLR148W UBP9P39967 754 aa4.99□□□□□ -1.61
PEP3YLR148W RIM101P33400 625 aa4.97□□□□□ -1.61
PEP3YLR148W TGL3P40308 642 aa4.97□□□□□ -1.61
PEP3YLR148W SIS1P25294 352 aaKnown RBP4.92□□□□□ -1.62
PEP3YLR148W BCH2P36122 765 aa4.91□□□□□ -1.62
PEP3YLR148W YIL055CP40523 627 aaKnown RBP4.87□□□□□ -1.63
PEP3YLR148W PTP3P40048 928 aa4.85□□□□□ -1.63
PEP3YLR148W EPS1P40557 701 aa4.8□□□□□ -1.64
PEP3YLR148W BBC1P47068 1157 aa4.78□□□□□ -1.64
PEP3YLR148W BDF1P35817 686 aa4.77□□□□□ -1.65
PEP3YLR148W OXP1P28273 1286 aa4.76□□□□□ -1.65
PEP3YLR148W YOR238WQ08634 303 aa4.76□□□□□ -1.65
PEP3YLR148W RSM7P47150 247 aa4.72□□□□□ -1.65
PEP3YLR148W YAH1Q12184 172 aaKnown RBP4.71□□□□□ -1.65
PEP3YLR148W YAP5P40574 245 aa4.68□□□□□ -1.66
PEP3YLR148W AI2P03876 854 aa4.68□□□□□ -1.66
PEP3YLR148W YBL029C-AQ3E756 94 aa4.68□□□□□ -1.66
PEP3YLR148W MST1P07236 462 aa4.67□□□□□ -1.66
PEP3YLR148W GTT3P39996 337 aa4.66□□□□□ -1.66
PEP3YLR148W NSR1P27476 414 aaKnown RBP RIP-Chip data4.65□□□□□ -1.66not detected
PEP3YLR148W SPP1Q03012 353 aa4.64□□□□□ -1.67
PEP3YLR148W WSC3Q12215 556 aa4.63□□□□□ -1.67
PEP3YLR148W VNX1P42839 908 aa4.61□□□□□ -1.67
PEP3YLR148W YJL171CP46992 396 aa4.6□□□□□ -1.67
PEP3YLR148W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.58□□□□□ -1.68not detected
PEP3YLR148W TIF11P38912 153 aaKnown RBP4.56□□□□□ -1.68
PEP3YLR148W YLR271WQ06152 274 aa4.53□□□□□ -1.68
PEP3YLR148W RQC2Q12532 1038 aaKnown RBP4.53□□□□□ -1.68
PEP3YLR148W SSP1P38871 571 aa4.53□□□□□ -1.68
PEP3YLR148W MRM1P25270 412 aa4.51□□□□□ -1.69
PEP3YLR148W ULI1P43604 169 aa4.5□□□□□ -1.69
PEP3YLR148W PIB1Q06651 286 aa4.5□□□□□ -1.69
PEP3YLR148W EAP1P36041 632 aaKnown RBP4.48□□□□□ -1.69
PEP3YLR148W PSD2P53037 1138 aaKnown RBP4.48□□□□□ -1.69
PEP3YLR148W LDB19Q12502 818 aa4.48□□□□□ -1.69
PEP3YLR148W FKH1P40466 484 aa4.47□□□□□ -1.69
PEP3YLR148W MSB4Q12317 492 aa4.47□□□□□ -1.69
PEP3YLR148W AIR2Q12476 344 aaKnown RBP4.47□□□□□ -1.69
PEP3YLR148W BMT6Q12291 365 aa4.46□□□□□ -1.7
PEP3YLR148W YMR1P47147 688 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
PEP3YLR148W TFG1P41895 735 aaPredicted RBP4.42□□□□□ -1.7
PEP3YLR148W RTG3P38165 486 aa4.42□□□□□ -1.7
PEP3YLR148W SET4P42948 560 aa4.42□□□□□ -1.7
PEP3YLR148W MGA2P40578 1113 aa4.41□□□□□ -1.7
PEP3YLR148W IOC2Q12072 812 aa4.41□□□□□ -1.7
PEP3YLR148W DBP1P24784 617 aaKnown RBP4.4□□□□□ -1.7
PEP3YLR148W DMA1P38823 416 aa4.4□□□□□ -1.7
PEP3YLR148W YOL036WQ08206 761 aa4.4□□□□□ -1.71
PEP3YLR148W RTG1P32607 177 aa4.39□□□□□ -1.71
PEP3YLR148W NCR1Q12200 1170 aa4.39□□□□□ -1.71
PEP3YLR148W YFR006WP43590 535 aa4.38□□□□□ -1.71
PEP3YLR148W TRP5P00931 707 aaKnown RBP4.37□□□□□ -1.71
PEP3YLR148W YNL035CP53962 389 aaKnown RBP4.37□□□□□ -1.71
PEP3YLR148W VMA1P17255 1071 aaKnown RBP4.35□□□□□ -1.71
PEP3YLR148W SEC61P32915 480 aa4.35□□□□□ -1.71
PEP3YLR148W CST9Q06032 482 aa4.35□□□□□ -1.71
PEP3YLR148W VPS29P38759 282 aa4.35□□□□□ -1.71
PEP3YLR148W ABP1P15891 592 aaKnown RBP4.34□□□□□ -1.71
PEP3YLR148W SAM3Q08986 587 aa4.32□□□□□ -1.72
PEP3YLR148W GYP5Q12344 894 aa4.32□□□□□ -1.72
PEP3YLR148W JIP4Q03361 876 aa4.31□□□□□ -1.72
PEP3YLR148W STS1P38637 319 aa4.31□□□□□ -1.72
PEP3YLR148W HTA1P04911 132 aaKnown RBP4.3□□□□□ -1.72
PEP3YLR148W HTA2P04912 132 aa4.3□□□□□ -1.72
PEP3YLR148W SAP30P38429 201 aa4.28□□□□□ -1.72
PEP3YLR148W DCW1P36091 449 aa4.28□□□□□ -1.72
PEP3YLR148W YDL129WQ07555 291 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms