Protein–RNA interactions for Protein: P39967

UBP9, Ubiquitin carboxyl-terminal hydrolase 9, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP9P39967 YLR159C-AYLR159C-A 132 nt4.19□□□□□ -1.74
UBP9P39967 YOL019W-AYOL019W-A 153 nt4.19□□□□□ -1.74
UBP9P39967 JEN1YKL217W 1851 nt4.19□□□□□ -1.74
UBP9P39967 RPH1YER169W 2391 nt4.19□□□□□ -1.74
UBP9P39967 SKP2YNL311C 2292 nt4.18□□□□□ -1.74
UBP9P39967 YDR354C-AYDR354C-A 144 nt4.18□□□□□ -1.74
UBP9P39967 SBE22YHR103W 2559 nt4.18□□□□□ -1.74
UBP9P39967 MPH1YIR002C 2982 nt4.18□□□□□ -1.74
UBP9P39967 MCM7YBR202W 2538 nt4.18□□□□□ -1.74
UBP9P39967 RPN2YIL075C 2838 nt4.17□□□□□ -1.74
UBP9P39967 ACB1YGR037C 264 nt4.17□□□□□ -1.74
UBP9P39967 YBR196C-AYBR196C-A 150 nt4.17□□□□□ -1.74
UBP9P39967 SKI7YOR076C 2244 nt4.17□□□□□ -1.74
UBP9P39967 RSF2YJR127C 4143 nt4.16□□□□□ -1.74
UBP9P39967 RRN6YBL014C 2685 nt4.16□□□□□ -1.74
UBP9P39967 GRR1YJR090C 3456 nt4.16□□□□□ -1.74
UBP9P39967 YLR146W-AYLR146W-A 189 nt4.16□□□□□ -1.74
UBP9P39967 HOS3YPL116W 2094 nt4.16□□□□□ -1.74
UBP9P39967 MTC4YBR255W 2085 nt4.16□□□□□ -1.74
UBP9P39967 GLC3YEL011W 2115 nt4.15□□□□□ -1.74
UBP9P39967 RPL23BYER117W 414 nt4.15□□□□□ -1.75
UBP9P39967 tM(CAU)Q2tM(CAU)Q2 78 nt4.15□□□□□ -1.75
UBP9P39967 SIP1YDR422C 2448 nt4.15□□□□□ -1.75
UBP9P39967 PET111YMR257C 2403 nt4.15□□□□□ -1.75
UBP9P39967 DUF1YOL087C 3351 nt4.15□□□□□ -1.75
UBP9P39967 SIZ1YDR409W 2715 nt4.14□□□□□ -1.75
UBP9P39967 SPC110YDR356W 2835 nt4.14□□□□□ -1.75
UBP9P39967 YPK9YOR291W 4419 nt4.13□□□□□ -1.75
UBP9P39967 YIL156W-BYIL156W-B 222 nt4.13□□□□□ -1.75
UBP9P39967 YJL026C-AYJL026C-A 222 nt4.13□□□□□ -1.75
UBP9P39967 YKL156C-AYKL156C-A 117 nt4.13□□□□□ -1.75
UBP9P39967 TTI1YKL033W 3117 nt4.13□□□□□ -1.75
UBP9P39967 GAL11YOL051W 3246 nt4.13□□□□□ -1.75
UBP9P39967 RPB2YOR151C 3675 nt4.13□□□□□ -1.75
UBP9P39967 RDH54YBR073W 2877 nt4.12□□□□□ -1.75
UBP9P39967 PUT3YKL015W 2940 nt4.12□□□□□ -1.75
UBP9P39967 MIS1YBR084W 2928 nt4.12□□□□□ -1.75
UBP9P39967 RDS1YCR106W 2499 nt4.12□□□□□ -1.75
UBP9P39967 RAD4YER162C 2265 nt4.12□□□□□ -1.75
UBP9P39967 ALK1YGL021W 2283 nt4.12□□□□□ -1.75
UBP9P39967 VTC3YPL019C 2508 nt4.12□□□□□ -1.75
UBP9P39967 GPI13YLL031C 3054 nt4.11□□□□□ -1.75
UBP9P39967 RRP6YOR001W 2202 nt4.11□□□□□ -1.75
UBP9P39967 TOP1YOL006C 2310 nt4.11□□□□□ -1.75
UBP9P39967 PDR5YOR153W 4536 nt4.11□□□□□ -1.75
UBP9P39967 SEN1YLR430W 6696 nt4.1□□□□□ -1.75
UBP9P39967 IOC2YLR095C 2439 nt4.09□□□□□ -1.75
UBP9P39967 YJL127W-AYJL127W-A 117 nt4.09□□□□□ -1.75
UBP9P39967 MBB1YJL199C 327 nt4.09□□□□□ -1.75
UBP9P39967 YPL150WYPL150W 2706 nt4.09□□□□□ -1.75
UBP9P39967 ATG2YNL242W 4779 nt4.09□□□□□ -1.76
UBP9P39967 ECM16YMR128W 3804 nt4.09□□□□□ -1.76
UBP9P39967 MSD1YPL104W 1977 nt4.09□□□□□ -1.76
UBP9P39967 AI1Q0050 2505 nt4.08□□□□□ -1.76
UBP9P39967 UBP3YER151C 2739 nt4.08□□□□□ -1.76
UBP9P39967 YGR051CYGR051C 324 nt4.08□□□□□ -1.76
UBP9P39967 IFH1YLR223C 3258 nt4.08□□□□□ -1.76
UBP9P39967 ATG11YPR049C 3537 nt4.07□□□□□ -1.76
UBP9P39967 VMA1YDL185W 3216 nt4.07□□□□□ -1.76
UBP9P39967 RSC3YDR303C 2658 nt4.07□□□□□ -1.76
UBP9P39967 MLH1YMR167W 2310 nt4.07□□□□□ -1.76
UBP9P39967 MPS1YDL028C 2295 nt4.07□□□□□ -1.76
UBP9P39967 EST1YLR233C 2100 nt4.07□□□□□ -1.76
UBP9P39967 RPO21YDL140C 5202 nt4.07□□□□□ -1.76
UBP9P39967 NAM2YLR382C 2685 nt4.06□□□□□ -1.76
UBP9P39967 NPR1YNL183C 2373 nt4.06□□□□□ -1.76
UBP9P39967 SLA1YBL007C 3735 nt4.06□□□□□ -1.76
UBP9P39967 FRK1YPL141C 2598 nt4.06□□□□□ -1.76
UBP9P39967 SNF2YOR290C 5112 nt4.06□□□□□ -1.76
UBP9P39967 YPP1YGR198W 2454 nt4.05□□□□□ -1.76
UBP9P39967 DNL4YOR005C 2835 nt4.05□□□□□ -1.76
UBP9P39967 HMG1YML075C 3165 nt4.04□□□□□ -1.76
UBP9P39967 PIM1YBL022C 3402 nt4.04□□□□□ -1.76
UBP9P39967 EAF1YDR359C 2949 nt4.04□□□□□ -1.76
UBP9P39967 MAK21YDR060W 3078 nt4.04□□□□□ -1.76
UBP9P39967 OSH2YDL019C 3852 nt4.04□□□□□ -1.76
UBP9P39967 NMA111YNL123W 2994 nt4.03□□□□□ -1.76
UBP9P39967 SIP3YNL257C 3690 nt4.03□□□□□ -1.76
UBP9P39967 RAD54YGL163C 2697 nt4.03□□□□□ -1.76
UBP9P39967 DIP2YLR129W 2832 nt4.03□□□□□ -1.76
UBP9P39967 CHD1YER164W 4407 nt4.02□□□□□ -1.77
UBP9P39967 URB2YJR041C 3525 nt4.01□□□□□ -1.77
UBP9P39967 RAD1YPL022W 3303 nt4.01□□□□□ -1.77
UBP9P39967 TCO89YPL180W 2400 nt4.01□□□□□ -1.77
UBP9P39967 YOR376W-AYOR376W-A 156 nt4.01□□□□□ -1.77
UBP9P39967 KAP95YLR347C 2586 nt4.01□□□□□ -1.77
UBP9P39967 IMH1YLR309C 2736 nt4.01□□□□□ -1.77
UBP9P39967 TMA108YIL137C 2841 nt4□□□□□ -1.77
UBP9P39967 SEF1YBL066C 3447 nt4□□□□□ -1.77
UBP9P39967 SUL1YBR294W 2580 nt4□□□□□ -1.77
UBP9P39967 MGA2YIR033W 3342 nt4□□□□□ -1.77
UBP9P39967 SWH1YAR042W 3567 nt3.99□□□□□ -1.77
UBP9P39967 PAU11YGL261C 363 nt3.99□□□□□ -1.77
UBP9P39967 snR38snR38 95 nt3.99□□□□□ -1.77
UBP9P39967 RSM19YNR037C 276 nt3.98□□□□□ -1.77
UBP9P39967 VPS35YJL154C 2835 nt3.98□□□□□ -1.77
UBP9P39967 SAK1YER129W 3429 nt3.98□□□□□ -1.77
UBP9P39967 TAH1YCR060W 336 nt3.97□□□□□ -1.77
UBP9P39967 COA6YMR244C-A 315 nt3.97□□□□□ -1.77
UBP9P39967 INP53YOR109W 3324 nt3.96□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 31 ms