RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W MTC1P47018 478 aaKnown RBP6.23□□□□□ -1.41
RRP6YOR001W DRS1P32892 752 aaKnown RBP5.93□□□□□ -1.46
RRP6YOR001W FAP1P53971 965 aa5.7□□□□□ -1.5
RRP6YOR001W PRY3P47033 881 aa5.37□□□□□ -1.55
RRP6YOR001W ISW2Q08773 1120 aa5.21□□□□□ -1.58
RRP6YOR001W PRI1P10363 409 aa5.19□□□□□ -1.58
RRP6YOR001W AAD16Q02895 342 aa5.19□□□□□ -1.58
RRP6YOR001W DIP2Q12220 943 aaPredicted RBP5.16□□□□□ -1.58
RRP6YOR001W BFR2Q06631 534 aaKnown RBP5.13□□□□□ -1.59
RRP6YOR001W TFA1P36100 482 aa5.12□□□□□ -1.59
RRP6YOR001W RPG1P38249 964 aaKnown RBP5.11□□□□□ -1.59
RRP6YOR001W HAA1Q12753 694 aaKnown RBP5.05□□□□□ -1.6
RRP6YOR001W RSE1Q04693 1361 aaKnown RBP4.99□□□□□ -1.61
RRP6YOR001W AVT3P36062 692 aa4.94□□□□□ -1.62
RRP6YOR001W TSR3Q12094 313 aaKnown RBP4.93□□□□□ -1.62
RRP6YOR001W REB1P21538 810 aa4.83□□□□□ -1.64
RRP6YOR001W RPL17AP05740 184 aaKnown RBP4.82□□□□□ -1.64
RRP6YOR001W RPL17BP46990 184 aaKnown RBP4.82□□□□□ -1.64
RRP6YOR001W YCK3P39962 524 aa4.8□□□□□ -1.64
RRP6YOR001W MRPL32P25348 183 aa4.8□□□□□ -1.64
RRP6YOR001W BUD31P25337 157 aaPredicted RBP4.61□□□□□ -1.67
RRP6YOR001W YGL015CP33199 130 aa4.57□□□□□ -1.68
RRP6YOR001W SPT21P35209 758 aa4.53□□□□□ -1.68
RRP6YOR001W RQC2Q12532 1038 aaKnown RBP4.53□□□□□ -1.68
RRP6YOR001W YKR023WP36119 530 aaKnown RBP4.48□□□□□ -1.69
RRP6YOR001W CDC27P38042 758 aa4.48□□□□□ -1.69
RRP6YOR001W HOP09932 586 aa4.42□□□□□ -1.7
RRP6YOR001W RIM101P33400 625 aa4.42□□□□□ -1.7
RRP6YOR001W TFC8Q12308 588 aa4.41□□□□□ -1.7
RRP6YOR001W UBP10P53874 792 aaPredicted RBP4.4□□□□□ -1.71
RRP6YOR001W DCD1P06773 312 aa4.38□□□□□ -1.71
RRP6YOR001W MAP2P38174 421 aaKnown RBP4.36□□□□□ -1.71
RRP6YOR001W SIS1P25294 352 aaKnown RBP4.34□□□□□ -1.72
RRP6YOR001W DMA1P38823 416 aa4.33□□□□□ -1.72
RRP6YOR001W YIL055CP40523 627 aaKnown RBP4.31□□□□□ -1.72
RRP6YOR001W SCY1P53009 804 aa4.3□□□□□ -1.72
RRP6YOR001W PTP3P40048 928 aa4.29□□□□□ -1.72
RRP6YOR001W SLX5P32828 619 aaKnown RBP4.27□□□□□ -1.73
RRP6YOR001W TIF4632P39936 914 aaKnown RBP4.27□□□□□ -1.73
RRP6YOR001W BCH2P36122 765 aa4.26□□□□□ -1.73
RRP6YOR001W OXP1P28273 1286 aa4.25□□□□□ -1.73
RRP6YOR001W TAF7Q05021 590 aa4.25□□□□□ -1.73
RRP6YOR001W YAH1Q12184 172 aaKnown RBP4.22□□□□□ -1.73
RRP6YOR001W TGL3P40308 642 aa4.19□□□□□ -1.74
RRP6YOR001W BBC1P47068 1157 aa4.19□□□□□ -1.74
RRP6YOR001W RSM7P47150 247 aa4.19□□□□□ -1.74
RRP6YOR001W EPS1P40557 701 aa4.18□□□□□ -1.74
RRP6YOR001W BDF1P35817 686 aa4.15□□□□□ -1.74
RRP6YOR001W AI2P03876 854 aa4.14□□□□□ -1.75
RRP6YOR001W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.13□□□□□ -1.75not detected
RRP6YOR001W SSP1P38871 571 aa4.11□□□□□ -1.75
RRP6YOR001W UBP9P39967 754 aa4.11□□□□□ -1.75
RRP6YOR001W LEO1P38439 464 aa4.1□□□□□ -1.75
RRP6YOR001W YLR271WQ06152 274 aa4.09□□□□□ -1.76
RRP6YOR001W YOR238WQ08634 303 aa4.05□□□□□ -1.76
RRP6YOR001W SAS10Q12136 610 aaPredicted RBP4.05□□□□□ -1.76
RRP6YOR001W YAP5P40574 245 aa4.02□□□□□ -1.77
RRP6YOR001W PSD2P53037 1138 aaKnown RBP4.01□□□□□ -1.77
RRP6YOR001W LEU3P08638 886 aa4.01□□□□□ -1.77
RRP6YOR001W NSR1P27476 414 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
RRP6YOR001W MRM1P25270 412 aa4□□□□□ -1.77
RRP6YOR001W MGA2P40578 1113 aa3.99□□□□□ -1.77
RRP6YOR001W GTT3P39996 337 aa3.99□□□□□ -1.77
RRP6YOR001W MST1P07236 462 aa3.98□□□□□ -1.77
RRP6YOR001W CST9Q06032 482 aa3.94□□□□□ -1.78
RRP6YOR001W RTG3P38165 486 aa3.94□□□□□ -1.78
RRP6YOR001W WSC3Q12215 556 aa3.94□□□□□ -1.78
RRP6YOR001W YBL029C-AQ3E756 94 aa3.94□□□□□ -1.78
RRP6YOR001W PIB1Q06651 286 aa3.92□□□□□ -1.78
RRP6YOR001W SPP1Q03012 353 aa3.91□□□□□ -1.78
RRP6YOR001W YMR1P47147 688 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
RRP6YOR001W VNX1P42839 908 aa3.9□□□□□ -1.79
RRP6YOR001W ABP1P15891 592 aaKnown RBP3.87□□□□□ -1.79
RRP6YOR001W DBP1P24784 617 aaKnown RBP3.87□□□□□ -1.79
RRP6YOR001W TIF11P38912 153 aaKnown RBP3.86□□□□□ -1.79
RRP6YOR001W YFR006WP43590 535 aa3.86□□□□□ -1.79
RRP6YOR001W VPS29P38759 282 aa3.86□□□□□ -1.79
RRP6YOR001W EAP1P36041 632 aaKnown RBP3.84□□□□□ -1.79
RRP6YOR001W MSB4Q12317 492 aa3.84□□□□□ -1.79
RRP6YOR001W RAM2P29703 316 aa3.83□□□□□ -1.8
RRP6YOR001W ULI1P43604 169 aa3.83□□□□□ -1.8
RRP6YOR001W RCR1P38212 213 aa3.83□□□□□ -1.8
RRP6YOR001W DMA2P53924 522 aa3.83□□□□□ -1.8
RRP6YOR001W VMA1P17255 1071 aaKnown RBP3.82□□□□□ -1.8
RRP6YOR001W STS1P38637 319 aa3.82□□□□□ -1.8
RRP6YOR001W RPN1P38764 993 aaKnown RBP3.82□□□□□ -1.8
RRP6YOR001W SET4P42948 560 aa3.82□□□□□ -1.8
RRP6YOR001W YPR148CQ06523 435 aa3.82□□□□□ -1.8
RRP6YOR001W YJL171CP46992 396 aa3.81□□□□□ -1.8
RRP6YOR001W YOL036WQ08206 761 aa3.81□□□□□ -1.8
RRP6YOR001W LDB19Q12502 818 aa3.8□□□□□ -1.8
RRP6YOR001W SET1P38827 1080 aaKnown RBP3.78□□□□□ -1.8
RRP6YOR001W SAM3Q08986 587 aa3.78□□□□□ -1.8
RRP6YOR001W GYP5Q12344 894 aa3.78□□□□□ -1.8
RRP6YOR001W MIF2P35201 549 aa3.77□□□□□ -1.81
RRP6YOR001W TRP5P00931 707 aaKnown RBP3.76□□□□□ -1.81
RRP6YOR001W MAK11P20484 414 aaKnown RBP3.76□□□□□ -1.81
RRP6YOR001W TFG1P41895 735 aaPredicted RBP3.76□□□□□ -1.81
RRP6YOR001W FKH1P40466 484 aa3.76□□□□□ -1.81
RRP6YOR001W IOC2Q12072 812 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms