RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	RQC2	Q12532	1038 aa	Known RBP	6.97	□□□□□ -1.29
HOS3	YPL116W	BFR2	Q06631	534 aa	Known RBP	6.67	□□□□□ -1.34
HOS3	YPL116W	TAF7	Q05021	590 aa		6.4	□□□□□ -1.38
HOS3	YPL116W	URN1	Q06525	465 aa	Known RBP	6.21	□□□□□ -1.41
HOS3	YPL116W	TFA1	P36100	482 aa		6.05	□□□□□ -1.44
HOS3	YPL116W	DRS1	P32892	752 aa	Known RBP	5.95	□□□□□ -1.46
HOS3	YPL116W	SIS2	P36024	562 aa		5.9	□□□□□ -1.46
HOS3	YPL116W	EBP2	P36049	427 aa	Known RBP	5.87	□□□□□ -1.47
HOS3	YPL116W	FAP1	P53971	965 aa		5.86	□□□□□ -1.47
HOS3	YPL116W	CAB3	P36076	571 aa		5.82	□□□□□ -1.48
HOS3	YPL116W	YFR016C	P43597	1233 aa	Known RBP	5.76	□□□□□ -1.49
HOS3	YPL116W	NOP2	P40991	618 aa	Known RBP	5.73	□□□□□ -1.49
HOS3	YPL116W	YRB30	P53107	440 aa	Predicted RBP	5.68	□□□□□ -1.5
HOS3	YPL116W	AVT3	P36062	692 aa		5.68	□□□□□ -1.5
HOS3	YPL116W	NAP1	P25293	417 aa	Known RBP	5.65	□□□□□ -1.51
HOS3	YPL116W	RPS0B	P46654	252 aa	Known RBP	5.63	□□□□□ -1.51
HOS3	YPL116W	IOC4	Q04213	475 aa		5.63	□□□□□ -1.51
HOS3	YPL116W	DIP2	Q12220	943 aa	Predicted RBP	5.62	□□□□□ -1.51
HOS3	YPL116W	KRI1	P42846	591 aa	Known RBP	5.6	□□□□□ -1.51
HOS3	YPL116W	PRY3	P47033	881 aa		5.54	□□□□□ -1.52
HOS3	YPL116W	LEO1	P38439	464 aa		5.52	□□□□□ -1.53
HOS3	YPL116W	AIM44	Q99299	758 aa		5.47	□□□□□ -1.53
HOS3	YPL116W	CWC22	P53333	577 aa	Known RBP	5.46	□□□□□ -1.54
HOS3	YPL116W	MNN4	P36044	1178 aa		5.44	□□□□□ -1.54
HOS3	YPL116W	YPR148C	Q06523	435 aa		5.44	□□□□□ -1.54
HOS3	YPL116W	DMA1	P38823	416 aa		5.43	□□□□□ -1.54
HOS3	YPL116W	SNU71	P53207	620 aa	Known RBP	5.39	□□□□□ -1.55
HOS3	YPL116W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.36	□□□□□ -1.55	not detected
HOS3	YPL116W	DEF1	P35732	738 aa	Known RBP	5.36	□□□□□ -1.55
HOS3	YPL116W	IFH1	P39520	1085 aa		5.36	□□□□□ -1.55
HOS3	YPL116W	TOP1	P04786	769 aa		5.35	□□□□□ -1.55
HOS3	YPL116W	PSH1	Q12161	406 aa		5.32	□□□□□ -1.56
HOS3	YPL116W	MON2	P48563	1636 aa	Predicted RBP	5.31	□□□□□ -1.56
HOS3	YPL116W	ENV11	P53246	860 aa		5.31	□□□□□ -1.56
HOS3	YPL116W	MDG1	P53885	366 aa		5.3	□□□□□ -1.56
HOS3	YPL116W	ORC1	P54784	914 aa	Predicted RBP	5.3	□□□□□ -1.56
HOS3	YPL116W	RLP24	Q07915	199 aa	Known RBP	5.28	□□□□□ -1.56
HOS3	YPL116W	NUG1	P40010	520 aa	Known RBP	5.26	□□□□□ -1.57
HOS3	YPL116W	RSE1	Q04693	1361 aa	Known RBP	5.26	□□□□□ -1.57
HOS3	YPL116W	TCB2	P48231	1178 aa		5.24	□□□□□ -1.57
HOS3	YPL116W	INO80	P53115	1489 aa		5.23	□□□□□ -1.57
HOS3	YPL116W	NOP53	Q12080	455 aa	Known RBP	5.23	□□□□□ -1.57
HOS3	YPL116W	RLF2	Q12495	606 aa		5.2	□□□□□ -1.58
HOS3	YPL116W	SPT7	P35177	1332 aa		5.2	□□□□□ -1.58
HOS3	YPL116W	SPT2	P06843	333 aa	Predicted RBP	5.2	□□□□□ -1.58
HOS3	YPL116W	PLP2	Q12017	286 aa		5.19	□□□□□ -1.58
HOS3	YPL116W	HIF1	Q12373	385 aa		5.19	□□□□□ -1.58
HOS3	YPL116W	HSP82	P02829	709 aa	Known RBP	5.18	□□□□□ -1.58
HOS3	YPL116W	GIN4	Q12263	1142 aa		5.18	□□□□□ -1.58
HOS3	YPL116W	HAA1	Q12753	694 aa	Known RBP	5.17	□□□□□ -1.58
HOS3	YPL116W	TIF4632	P39936	914 aa	Known RBP	5.16	□□□□□ -1.58
HOS3	YPL116W	TOA1	P32773	286 aa		5.16	□□□□□ -1.58
HOS3	YPL116W	RPN1	P38764	993 aa	Known RBP	5.16	□□□□□ -1.58
HOS3	YPL116W	SWE1	P32944	819 aa		5.15	□□□□□ -1.59
HOS3	YPL116W	FPR3	P38911	411 aa	Known RBP	5.15	□□□□□ -1.59
HOS3	YPL116W	ENP1	P38333	483 aa	Known RBP	5.14	□□□□□ -1.59
HOS3	YPL116W	RPS0A	P32905	252 aa	Known RBP	5.14	□□□□□ -1.59
HOS3	YPL116W	BRL1	P38770	471 aa		5.13	□□□□□ -1.59
HOS3	YPL116W	NHA1	Q99271	985 aa		5.12	□□□□□ -1.59
HOS3	YPL116W	YGR130C	P53278	816 aa		5.11	□□□□□ -1.59
HOS3	YPL116W	SUB1	P54000	292 aa	Known RBP	5.11	□□□□□ -1.59
HOS3	YPL116W	TLG1	Q03322	224 aa		5.11	□□□□□ -1.59
HOS3	YPL116W	QCR6	P00127	147 aa		5.1	□□□□□ -1.59
HOS3	YPL116W	SSA1	P10591	642 aa	Known RBP	5.1	□□□□□ -1.59
HOS3	YPL116W	SSA2	P10592	639 aa	Known RBP	5.1	□□□□□ -1.59
HOS3	YPL116W	FPR4	Q06205	392 aa	Predicted RBP	5.1	□□□□□ -1.59
HOS3	YPL116W	SPT21	P35209	758 aa		5.09	□□□□□ -1.59
HOS3	YPL116W	SPT16	P32558	1035 aa	Known RBP	5.09	□□□□□ -1.59
HOS3	YPL116W	ABP1	P15891	592 aa	Known RBP	5.08	□□□□□ -1.6
HOS3	YPL116W	FUN12	P39730	1002 aa	Known RBP	5.08	□□□□□ -1.6
HOS3	YPL116W	GRX3	Q03835	250 aa		5.08	□□□□□ -1.6
HOS3	YPL116W	RNA1	P11745	407 aa	Known RBP	5.07	□□□□□ -1.6
HOS3	YPL116W	RIX1	P38883	763 aa	Predicted RBP	5.07	□□□□□ -1.6
HOS3	YPL116W	YNL011C	P53980	444 aa		5.07	□□□□□ -1.6
HOS3	YPL116W	VPS72	Q03388	795 aa		5.07	□□□□□ -1.6
HOS3	YPL116W	SAS10	Q12136	610 aa	Predicted RBP	5.06	□□□□□ -1.6
HOS3	YPL116W	YTA7	P40340	1379 aa		5.06	□□□□□ -1.6
HOS3	YPL116W	PIL1	P53252	339 aa	Known RBP	5.06	□□□□□ -1.6
HOS3	YPL116W	DMA2	P53924	522 aa		5.06	□□□□□ -1.6
HOS3	YPL116W	MPP10	P47083	593 aa	Known RBP	5.05	□□□□□ -1.6
HOS3	YPL116W	SPC110	P32380	944 aa		5.04	□□□□□ -1.6
HOS3	YPL116W	BRN1	P38170	754 aa		5.04	□□□□□ -1.6
HOS3	YPL116W	ATG36	P46983	293 aa		5.04	□□□□□ -1.6
HOS3	YPL116W	MTC1	P47018	478 aa	Known RBP	5.04	□□□□□ -1.6
HOS3	YPL116W	TPO2	P53283	614 aa		5.04	□□□□□ -1.6
HOS3	YPL116W	VPS4	P52917	437 aa		5.03	□□□□□ -1.6
HOS3	YPL116W	NMD2	P38798	1089 aa	Known RBP	5.03	□□□□□ -1.6
HOS3	YPL116W	ASF1	P32447	279 aa		5.01	□□□□□ -1.61
HOS3	YPL116W	ISW1	P38144	1129 aa		5.01	□□□□□ -1.61
HOS3	YPL116W	LEU3	P08638	886 aa		5.01	□□□□□ -1.61
HOS3	YPL116W	SEC3	P33332	1336 aa	Known RBP	5	□□□□□ -1.61
HOS3	YPL116W	DNA2	P38859	1522 aa		5	□□□□□ -1.61
HOS3	YPL116W	YSH1	Q06224	779 aa	Predicted RBP	5	□□□□□ -1.61
HOS3	YPL116W	ETT1	Q08421	412 aa	Known RBP	4.99	□□□□□ -1.61
HOS3	YPL116W	LAM6	Q08001	693 aa		4.98	□□□□□ -1.61
HOS3	YPL116W	YMR196W	Q04336	1088 aa		4.97	□□□□□ -1.61
HOS3	YPL116W	DAL5	P15365	543 aa		4.96	□□□□□ -1.61
HOS3	YPL116W	YCK3	P39962	524 aa		4.96	□□□□□ -1.61
HOS3	YPL116W	PEA2	P40091	420 aa		4.96	□□□□□ -1.61
HOS3	YPL116W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.61	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms