RNA–Protein interactions for RNA: YBR073W

RDH54, Transcript of DNA-dependent ATPase, yeastyeast

Gene RDH54, Length 2,877 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDH54YBR073W DRS1P32892 752 aaKnown RBP8.37□□□□□ -1.07
RDH54YBR073W MTC1P47018 478 aaKnown RBP7.81□□□□□ -1.16
RDH54YBR073W TFA1P36100 482 aa7.6□□□□□ -1.19
RDH54YBR073W RQC2Q12532 1038 aaKnown RBP7.5□□□□□ -1.21
RDH54YBR073W BFR2Q06631 534 aaKnown RBP7.47□□□□□ -1.21
RDH54YBR073W AVT3P36062 692 aa7.16□□□□□ -1.26
RDH54YBR073W TAF7Q05021 590 aa7.11□□□□□ -1.27
RDH54YBR073W DIP2Q12220 943 aaPredicted RBP6.95□□□□□ -1.3
RDH54YBR073W DMA1P38823 416 aa6.43□□□□□ -1.38
RDH54YBR073W LEO1P38439 464 aa6.41□□□□□ -1.38
RDH54YBR073W RSE1Q04693 1361 aaKnown RBP6.33□□□□□ -1.4
RDH54YBR073W URN1Q06525 465 aaKnown RBP6.23□□□□□ -1.41
RDH54YBR073W IOC4Q04213 475 aa6.18□□□□□ -1.42
RDH54YBR073W IFH1P39520 1085 aa6.17□□□□□ -1.42
RDH54YBR073W NAP1P25293 417 aaKnown RBP6.15□□□□□ -1.43
RDH54YBR073W ABP1P15891 592 aaKnown RBP6.14□□□□□ -1.43
RDH54YBR073W PTP3P40048 928 aa6.11□□□□□ -1.43
RDH54YBR073W ORC1P54784 914 aaPredicted RBP6.11□□□□□ -1.43
RDH54YBR073W RIM101P33400 625 aa6.09□□□□□ -1.43
RDH54YBR073W SPT21P35209 758 aa6.09□□□□□ -1.43
RDH54YBR073W ISW2Q08773 1120 aa6.08□□□□□ -1.44
RDH54YBR073W RPL17AP05740 184 aaKnown RBP6.06□□□□□ -1.44
RDH54YBR073W RPL17BP46990 184 aaKnown RBP6.06□□□□□ -1.44
RDH54YBR073W RPG1P38249 964 aaKnown RBP6.05□□□□□ -1.44
RDH54YBR073W SAS10Q12136 610 aaPredicted RBP6.04□□□□□ -1.44
RDH54YBR073W LEU3P08638 886 aa6□□□□□ -1.45
RDH54YBR073W SSP1P38871 571 aa6□□□□□ -1.45
RDH54YBR073W PRI1P10363 409 aa5.96□□□□□ -1.46
RDH54YBR073W OXP1P28273 1286 aa5.94□□□□□ -1.46
RDH54YBR073W DMA2P53924 522 aa5.87□□□□□ -1.47
RDH54YBR073W YLR271WQ06152 274 aa5.86□□□□□ -1.47
RDH54YBR073W REB1P21538 810 aa5.85□□□□□ -1.47
RDH54YBR073W YRB30P53107 440 aaPredicted RBP5.77□□□□□ -1.49
RDH54YBR073W AIM44Q99299 758 aa5.77□□□□□ -1.49
RDH54YBR073W YFR016CP43597 1233 aaKnown RBP5.75□□□□□ -1.49
RDH54YBR073W YAH1Q12184 172 aaKnown RBP5.74□□□□□ -1.49
RDH54YBR073W RLF2Q12495 606 aa5.74□□□□□ -1.49
RDH54YBR073W TOP1P04786 769 aa5.73□□□□□ -1.49
RDH54YBR073W YKR023WP36119 530 aaKnown RBP5.73□□□□□ -1.49
RDH54YBR073W MGA2P40578 1113 aa5.73□□□□□ -1.49
RDH54YBR073W SNU71P53207 620 aaKnown RBP5.73□□□□□ -1.49
RDH54YBR073W ATG36P46983 293 aa5.72□□□□□ -1.49
RDH54YBR073W CST9Q06032 482 aa5.72□□□□□ -1.49
RDH54YBR073W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49 RIP-Chip
RDH54YBR073W KRI1P42846 591 aaKnown RBP5.71□□□□□ -1.5
RDH54YBR073W NOP8Q08287 484 aaPredicted RBP5.71□□□□□ -1.5
RDH54YBR073W RPN1P38764 993 aaKnown RBP5.69□□□□□ -1.5
RDH54YBR073W PSD2P53037 1138 aaKnown RBP5.67□□□□□ -1.5
RDH54YBR073W AAD16Q02895 342 aa5.66□□□□□ -1.5
RDH54YBR073W SWE1P32944 819 aa5.65□□□□□ -1.5
RDH54YBR073W SIS2P36024 562 aa5.65□□□□□ -1.51
RDH54YBR073W RSM7P47150 247 aa5.63□□□□□ -1.51
RDH54YBR073W YPR148CQ06523 435 aa5.63□□□□□ -1.51
RDH54YBR073W TSR3Q12094 313 aaKnown RBP5.61□□□□□ -1.51
RDH54YBR073W YIL055CP40523 627 aaKnown RBP5.61□□□□□ -1.51
RDH54YBR073W RAM2P29703 316 aa5.6□□□□□ -1.51
RDH54YBR073W CWC22P53333 577 aaKnown RBP5.59□□□□□ -1.51
RDH54YBR073W YML020WQ03722 664 aa5.59□□□□□ -1.51
RDH54YBR073W CKB1P43639 278 aa5.59□□□□□ -1.51
RDH54YBR073W LAM6Q08001 693 aa5.57□□□□□ -1.52
RDH54YBR073W TFC8Q12308 588 aa5.57□□□□□ -1.52
RDH54YBR073W TPO2P53283 614 aa5.55□□□□□ -1.52
RDH54YBR073W MDG1P53885 366 aa5.54□□□□□ -1.52
RDH54YBR073W SET1P38827 1080 aaKnown RBP5.53□□□□□ -1.52
RDH54YBR073W DSF2P38213 736 aa5.52□□□□□ -1.53
RDH54YBR073W AI2P03876 854 aa5.51□□□□□ -1.53
RDH54YBR073W RLP24Q07915 199 aaKnown RBP5.51□□□□□ -1.53
RDH54YBR073W HOP09932 586 aa5.51□□□□□ -1.53
RDH54YBR073W RCR1P38212 213 aa5.5□□□□□ -1.53
RDH54YBR073W FAR11P53917 953 aa5.5□□□□□ -1.53
RDH54YBR073W FAP1P53971 965 aa5.5□□□□□ -1.53
RDH54YBR073W RPS0BP46654 252 aaKnown RBP5.49□□□□□ -1.53
RDH54YBR073W DCD1P06773 312 aa5.49□□□□□ -1.53
RDH54YBR073W GIN4Q12263 1142 aa5.49□□□□□ -1.53
RDH54YBR073W NUG1P40010 520 aaKnown RBP5.47□□□□□ -1.53
RDH54YBR073W MRX12P47084 519 aa5.47□□□□□ -1.53
RDH54YBR073W VPS70P47161 811 aa5.47□□□□□ -1.53
RDH54YBR073W EBP2P36049 427 aaKnown RBP5.47□□□□□ -1.53
RDH54YBR073W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.46□□□□□ -1.53not detected
RDH54YBR073W PAM1P37304 830 aaKnown RBP5.46□□□□□ -1.54
RDH54YBR073W DOS2P54858 310 aa5.45□□□□□ -1.54
RDH54YBR073W SPB4P25808 606 aaPredicted RBP5.45□□□□□ -1.54
RDH54YBR073W BRL1P38770 471 aa5.45□□□□□ -1.54
RDH54YBR073W SPC42P36094 363 aa5.44□□□□□ -1.54
RDH54YBR073W BCH2P36122 765 aa5.43□□□□□ -1.54
RDH54YBR073W CDC27P38042 758 aa5.43□□□□□ -1.54
RDH54YBR073W KIN1P13185 1064 aa5.43□□□□□ -1.54
RDH54YBR073W MAM3Q12296 706 aa5.43□□□□□ -1.54
RDH54YBR073W YNR021WP53723 404 aaKnown RBP5.42□□□□□ -1.54
RDH54YBR073W ISW1P38144 1129 aa5.42□□□□□ -1.54
RDH54YBR073W PSH1Q12161 406 aa5.41□□□□□ -1.54
RDH54YBR073W MON2P48563 1636 aaPredicted RBP5.41□□□□□ -1.54
RDH54YBR073W SLX8P40072 274 aa5.41□□□□□ -1.54
RDH54YBR073W NUP42P49686 430 aaKnown RBP5.4□□□□□ -1.54
RDH54YBR073W PBS2P08018 668 aa5.4□□□□□ -1.55
RDH54YBR073W MAK11P20484 414 aaKnown RBP5.4□□□□□ -1.55
RDH54YBR073W SUB1P54000 292 aaKnown RBP5.4□□□□□ -1.55
RDH54YBR073W AIM7Q12156 149 aa5.4□□□□□ -1.55
RDH54YBR073W OCA5P38738 679 aa5.39□□□□□ -1.55
RDH54YBR073W SSF1P38789 453 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms