Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 LRCH4-210ENST00000498539 819 ntTSL 317.37■□□□□ 0.374e-9■□□□□ 8.5
XRCC6P12956 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.27■□□□□ 0.841e-10■□□□□ 8.5
XRCC6P12956 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC25.49■■□□□ 1.679e-7■□□□□ 8.5
XRCC6P12956 MATR3-221ENST00000513121 573 ntTSL 221.28■■□□□ 19e-7■□□□□ 8.5
XRCC6P12956 MATR3-208ENST00000504045 1530 ntTSL 518.8■□□□□ 0.69e-7■□□□□ 8.5
XRCC6P12956 MATR3-222ENST00000513678 444 ntTSL 218.74■□□□□ 0.599e-7■□□□□ 8.5
XRCC6P12956 MATR3-220ENST00000512876 575 ntTSL 318.68■□□□□ 0.589e-7■□□□□ 8.5
XRCC6P12956 MATR3-235ENST00000506147 580 ntTSL 417.77■□□□□ 0.449e-7■□□□□ 8.5
XRCC6P12956 MATR3-239ENST00000514694 587 ntTSL 417.19■□□□□ 0.349e-7■□□□□ 8.5
XRCC6P12956 MATR3-238ENST00000512107 579 ntTSL 416.22■□□□□ 0.199e-7■□□□□ 8.5
XRCC6P12956 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC15.89■□□□□ 0.139e-7■□□□□ 8.5
XRCC6P12956 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.139e-7■□□□□ 8.5
XRCC6P12956 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.029e-7■□□□□ 8.5
XRCC6P12956 MATR3-236ENST00000509644 750 ntTSL 314.32□□□□□ -0.129e-7■□□□□ 8.5
XRCC6P12956 MATR3-231ENST00000502394 589 ntTSL 413.56□□□□□ -0.249e-7■□□□□ 8.5
XRCC6P12956 MATR3-234ENST00000505016 664 ntTSL 213.54□□□□□ -0.249e-7■□□□□ 8.5
XRCC6P12956 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.649e-7■□□□□ 8.5
XRCC6P12956 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.869e-7■□□□□ 8.5
XRCC6P12956 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC9.61□□□□□ -0.879e-7■□□□□ 8.5
XRCC6P12956 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.38□□□□□ -1.239e-7■□□□□ 8.5
XRCC6P12956 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.15□□□□□ -1.269e-7■□□□□ 8.5
XRCC6P12956 MATR3-212ENST00000507860 571 ntTSL 47.02□□□□□ -1.299e-7■□□□□ 8.5
XRCC6P12956 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.67□□□□□ -1.349e-7■□□□□ 8.5
XRCC6P12956 MATR3-218ENST00000511978 573 ntTSL 36.25□□□□□ -1.419e-7■□□□□ 8.5
XRCC6P12956 MATR3-214ENST00000509918 377 ntTSL 46.21□□□□□ -1.429e-7■□□□□ 8.5
XRCC6P12956 MATR3-209ENST00000504311 423 ntTSL 35.42□□□□□ -1.549e-7■□□□□ 8.5
XRCC6P12956 MATR3-216ENST00000511249 447 ntTSL 45.38□□□□□ -1.559e-7■□□□□ 8.5
XRCC6P12956 PGGHG-207ENST00000482937 734 ntTSL 518.7■□□□□ 0.583e-10■□□□□ 8.5
XRCC6P12956 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.54■■□□□ 1.042e-8■□□□□ 8.5
XRCC6P12956 MLLT6-209ENST00000620482 1556 ntTSL 1 (best)20.09■□□□□ 0.812e-8■□□□□ 8.5
XRCC6P12956 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.782e-8■□□□□ 8.5
XRCC6P12956 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.89■□□□□ 0.772e-8■□□□□ 8.5
XRCC6P12956 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.452e-8■□□□□ 8.5
XRCC6P12956 BAGE2-201ENST00000470054 1891 ntTSL 1 (best)17.41■□□□□ 0.382e-8■□□□□ 8.5
XRCC6P12956 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.382e-8■□□□□ 8.5
XRCC6P12956 MLLT6-201ENST00000611305 483 ntTSL 216.94■□□□□ 0.32e-8■□□□□ 8.5
XRCC6P12956 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC16.92■□□□□ 0.32e-8■□□□□ 8.5
XRCC6P12956 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.232e-8■□□□□ 8.5
XRCC6P12956 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC16.15■□□□□ 0.182e-8■□□□□ 8.5
XRCC6P12956 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC15.65■□□□□ 0.12e-8■□□□□ 8.5
XRCC6P12956 MYH10-202ENST00000360416 7762 ntTSL 1 (best) BASIC12.84□□□□□ -0.352e-8■□□□□ 8.5
XRCC6P12956 MYH10-201ENST00000269243 7662 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.512e-8■□□□□ 8.5
XRCC6P12956 MYH10-203ENST00000379980 7694 ntTSL 1 (best) BASIC11.85□□□□□ -0.512e-8■□□□□ 8.5
XRCC6P12956 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.512e-8■□□□□ 8.5
XRCC6P12956 MLLT6-203ENST00000614769 657 ntTSL 211.34□□□□□ -0.592e-8■□□□□ 8.5
XRCC6P12956 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.672e-8■□□□□ 8.5
XRCC6P12956 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.72e-8■□□□□ 8.5
XRCC6P12956 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC10.45□□□□□ -0.742e-8■□□□□ 8.5
XRCC6P12956 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC10.35□□□□□ -0.752e-8■□□□□ 8.5
XRCC6P12956 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.752e-8■□□□□ 8.5
XRCC6P12956 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC10.18□□□□□ -0.782e-8■□□□□ 8.5
XRCC6P12956 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC10.01□□□□□ -0.812e-8■□□□□ 8.5
XRCC6P12956 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.812e-8■□□□□ 8.5
XRCC6P12956 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.822e-8■□□□□ 8.5
XRCC6P12956 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC9.71□□□□□ -0.862e-8■□□□□ 8.5
XRCC6P12956 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC9.54□□□□□ -0.882e-8■□□□□ 8.5
XRCC6P12956 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC9.52□□□□□ -0.892e-8■□□□□ 8.5
XRCC6P12956 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC9.51□□□□□ -0.892e-8■□□□□ 8.5
XRCC6P12956 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC9.51□□□□□ -0.892e-8■□□□□ 8.5
XRCC6P12956 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC9.27□□□□□ -0.932e-8■□□□□ 8.5
XRCC6P12956 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC9.27□□□□□ -0.932e-8■□□□□ 8.5
XRCC6P12956 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC9.27□□□□□ -0.932e-8■□□□□ 8.5
XRCC6P12956 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC9.26□□□□□ -0.932e-8■□□□□ 8.5
XRCC6P12956 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC9.21□□□□□ -0.932e-8■□□□□ 8.5
XRCC6P12956 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC9.18□□□□□ -0.942e-8■□□□□ 8.5
XRCC6P12956 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC9.18□□□□□ -0.942e-8■□□□□ 8.5
XRCC6P12956 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC9.03□□□□□ -0.962e-8■□□□□ 8.5
XRCC6P12956 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.95□□□□□ -0.982e-8■□□□□ 8.5
XRCC6P12956 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.92□□□□□ -0.982e-8■□□□□ 8.5
XRCC6P12956 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.66□□□□□ -1.022e-8■□□□□ 8.5
XRCC6P12956 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.61□□□□□ -1.032e-8■□□□□ 8.5
XRCC6P12956 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.24□□□□□ -1.092e-8■□□□□ 8.5
XRCC6P12956 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.02□□□□□ -1.132e-8■□□□□ 8.5
XRCC6P12956 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.02□□□□□ -1.132e-8■□□□□ 8.5
XRCC6P12956 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8□□□□□ -1.132e-8■□□□□ 8.5
XRCC6P12956 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.73□□□□□ -1.172e-8■□□□□ 8.5
XRCC6P12956 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.73□□□□□ -1.172e-8■□□□□ 8.5
XRCC6P12956 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC7.3□□□□□ -1.242e-8■□□□□ 8.5
XRCC6P12956 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.482e-8■□□□□ 8.5
XRCC6P12956 ANO9-206ENST00000528927 2639 ntTSL 1 (best)21.35■■□□□ 1.011e-7■□□□□ 8.5
XRCC6P12956 ANO9-207ENST00000532094 5487 ntTSL 219.32■□□□□ 0.681e-7■□□□□ 8.5
XRCC6P12956 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.51e-7■□□□□ 8.5
XRCC6P12956 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.311e-6■□□□□ 8.5
XRCC6P12956 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC15.54■□□□□ 0.081e-6■□□□□ 8.5
XRCC6P12956 ZNF692-217ENST00000495731 461 ntTSL 330.69■■■□□ 2.55e-19■□□□□ 8.5
XRCC6P12956 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.315e-19■□□□□ 8.5
XRCC6P12956 ZNF692-203ENST00000412341 1916 ntTSL 526.94■■□□□ 1.95e-19■□□□□ 8.5
XRCC6P12956 ZNF692-225ENST00000533614 553 ntTSL 425.85■■□□□ 1.735e-19■□□□□ 8.5
XRCC6P12956 ZNF692-208ENST00000470787 1544 ntTSL 225.09■■□□□ 1.615e-19■□□□□ 8.5
XRCC6P12956 ZNF692-226ENST00000533647 548 ntTSL 324.81■■□□□ 1.565e-19■□□□□ 8.5
XRCC6P12956 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.435e-19■□□□□ 8.5
XRCC6P12956 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.45e-19■□□□□ 8.5
XRCC6P12956 ZNF692-220ENST00000496411 1064 ntTSL 323.48■■□□□ 1.355e-19■□□□□ 8.5
XRCC6P12956 ZNF692-212ENST00000478107 1051 ntTSL 522.9■■□□□ 1.265e-19■□□□□ 8.5
XRCC6P12956 ZNF692-219ENST00000496231 656 ntTSL 322.78■■□□□ 1.245e-19■□□□□ 8.5
XRCC6P12956 ZNF692-224ENST00000530986 595 ntTSL 422.49■■□□□ 1.195e-19■□□□□ 8.5
XRCC6P12956 ZNF692-227ENST00000533927 2026 ntTSL 1 (best)21.33■■□□□ 15e-19■□□□□ 8.5
XRCC6P12956 ZNF692-218ENST00000496053 694 ntTSL 320.72■□□□□ 0.915e-19■□□□□ 8.5
XRCC6P12956 ZNF692-215ENST00000483791 681 ntTSL 320.45■□□□□ 0.865e-19■□□□□ 8.5
XRCC6P12956 ZNF692-221ENST00000497847 1031 ntTSL 220.45■□□□□ 0.865e-19■□□□□ 8.5
Retrieved 100 of 6,788 protein–RNA pairs in 123.5 ms