RNA–Protein interactions for RNA: ENST00000509990.5

MATR3-237, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MATR3, Length 3,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-237ENST00000509990 NISCHQ9Y2I1 1504 aa25.37■■□□□ 1.65
MATR3-237ENST00000509990 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
MATR3-237ENST00000509990 DCAF8L2P0C7V8 631 aa22.26■■□□□ 1.15
MATR3-237ENST00000509990 SUPT5HO00267 1087 aaKnown RBP22.02■■□□□ 1.12
MATR3-237ENST00000509990 ZCCHC6Q5VYS8 1495 aaKnown RBP21.34■■□□□ 1.01
MATR3-237ENST00000509990 CCDC180Q9P1Z9 1646 aa21.14■□□□□ 0.97
MATR3-237ENST00000509990 CHIC1Q5VXU3 224 aa20.91■□□□□ 0.94
MATR3-237ENST00000509990 MYO15BQ96JP2 1530 aa20.8■□□□□ 0.92
MATR3-237ENST00000509990 EHMT2Q96KQ7 1210 aa20.75■□□□□ 0.91
MATR3-237ENST00000509990 ABCC9O60706 1549 aa20.72■□□□□ 0.91
MATR3-237ENST00000509990 LOC105371045A0A1W2PR82 267 aa20.71■□□□□ 0.91
MATR3-237ENST00000509990 SCRIBQ14160 1630 aa20.55■□□□□ 0.88
MATR3-237ENST00000509990 FAM9AQ8IZU1 332 aaPredicted RBP20.52■□□□□ 0.88
MATR3-237ENST00000509990 PCGF6Q9BYE7 350 aa20.47■□□□□ 0.87
MATR3-237ENST00000509990 DCAF1Q9Y4B6 1507 aa20.33■□□□□ 0.85
MATR3-237ENST00000509990 RSF1Q96T23 1441 aaPredicted RBP20.23■□□□□ 0.83
MATR3-237ENST00000509990 TRIM41Q8WV44 630 aa20.2■□□□□ 0.82
MATR3-237ENST00000509990 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
MATR3-237ENST00000509990 PPARGC1BQ86YN6 1023 aaKnown RBP20.15■□□□□ 0.82
MATR3-237ENST00000509990 PABPN1Q86U42 306 aaKnown RBP eCLIP20.12■□□□□ 0.81
MATR3-237ENST00000509990 RB1CC1Q8TDY2 1594 aa20.02■□□□□ 0.8
MATR3-237ENST00000509990 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
MATR3-237ENST00000509990 HRCP23327 699 aa19.94■□□□□ 0.78
MATR3-237ENST00000509990 TTBK1Q5TCY1 1321 aaPredicted RBP19.93■□□□□ 0.78
MATR3-237ENST00000509990 WIZO95785 1651 aa19.81■□□□□ 0.76
MATR3-237ENST00000509990 NACADO15069 1562 aa19.79■□□□□ 0.76
MATR3-237ENST00000509990 TRIM26Q12899 539 aaPredicted RBP19.64■□□□□ 0.74
MATR3-237ENST00000509990 RANGAP1P46060 587 aaPredicted RBP19.59■□□□□ 0.73
MATR3-237ENST00000509990 ABCC8Q09428 1581 aa19.52■□□□□ 0.72
MATR3-237ENST00000509990 CCDC88BA6NC98 1476 aa19.42■□□□□ 0.7
MATR3-237ENST00000509990 UBTFP17480 764 aaKnown RBP19.4■□□□□ 0.7
MATR3-237ENST00000509990 BAZ1AQ9NRL2 1556 aaPredicted RBP19.39■□□□□ 0.7
MATR3-237ENST00000509990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.37■□□□□ 0.69
MATR3-237ENST00000509990 SOGA1O94964 1423 aa19.36■□□□□ 0.69
MATR3-237ENST00000509990 RUSC2Q8N2Y8 1516 aa19.33■□□□□ 0.69
MATR3-237ENST00000509990 UNC13AQ9UPW8 1703 aa19.33■□□□□ 0.68
MATR3-237ENST00000509990 SMARCA4P51532 1647 aa19.3■□□□□ 0.68
MATR3-237ENST00000509990 BICRAQ9NZM4 1560 aa19.21■□□□□ 0.67
MATR3-237ENST00000509990 SMARCA2P51531 1590 aa19.21■□□□□ 0.67
MATR3-237ENST00000509990 TOP2AP11388 1531 aaKnown RBP19.2■□□□□ 0.66
MATR3-237ENST00000509990 CSRNP3Q8WYN3 585 aa19.17■□□□□ 0.66
MATR3-237ENST00000509990 CCER1Q8TC90 406 aaPredicted RBP19.13■□□□□ 0.65
MATR3-237ENST00000509990 EIF4G1Q04637 1599 aaKnown RBP19.07■□□□□ 0.64
MATR3-237ENST00000509990 HNRNPUL2Q1KMD3 747 aaKnown RBP19.03■□□□□ 0.64
MATR3-237ENST00000509990 CEP162Q5TB80 1403 aa19.03■□□□□ 0.64
MATR3-237ENST00000509990 WRNQ14191 1432 aaPredicted RBP eCLIP19.01■□□□□ 0.636e-9■■■■■ 30.6
MATR3-237ENST00000509990 ATAD2BQ9ULI0 1458 aa18.99■□□□□ 0.63
MATR3-237ENST00000509990 BAZ1BQ9UIG0 1483 aaKnown RBP18.98■□□□□ 0.63
MATR3-237ENST00000509990 SYNJ1O43426 1573 aa18.88■□□□□ 0.61
MATR3-237ENST00000509990 ZEB1P37275 1124 aaPredicted RBP18.86■□□□□ 0.61
MATR3-237ENST00000509990 TNIKQ9UKE5 1360 aa18.83■□□□□ 0.6
MATR3-237ENST00000509990 RAPGEF2Q9Y4G8 1499 aa18.78■□□□□ 0.6
MATR3-237ENST00000509990 APLP2Q06481 763 aa18.76■□□□□ 0.59
MATR3-237ENST00000509990 ITGAEP38570 1179 aa18.75■□□□□ 0.59
MATR3-237ENST00000509990 GOLGA3Q08378 1498 aa18.73■□□□□ 0.59
MATR3-237ENST00000509990 CLIP1P30622 1438 aa18.72■□□□□ 0.59
MATR3-237ENST00000509990 P3H3Q8IVL6 736 aa18.7■□□□□ 0.58
MATR3-237ENST00000509990 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
MATR3-237ENST00000509990 ATP1B4Q9UN42 357 aaPredicted RBP18.69■□□□□ 0.58
MATR3-237ENST00000509990 KANK4Q5T7N3 995 aaPredicted RBP18.65■□□□□ 0.58
MATR3-237ENST00000509990 PEG3Q9GZU2 1588 aa18.63■□□□□ 0.57
MATR3-237ENST00000509990 CEP164Q9UPV0 1460 aa18.6■□□□□ 0.57
MATR3-237ENST00000509990 EEA1Q15075 1411 aa18.6■□□□□ 0.57
MATR3-237ENST00000509990 PELP1Q8IZL8 1130 aaKnown RBP18.59■□□□□ 0.57
MATR3-237ENST00000509990 YTHDC1Q96MU7 727 aaKnown RBP18.57■□□□□ 0.56
MATR3-237ENST00000509990 DIEXFQ68CQ4 756 aaKnown RBP18.57■□□□□ 0.56
MATR3-237ENST00000509990 CUX1P39880 1505 aa18.51■□□□□ 0.55
MATR3-237ENST00000509990 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
MATR3-237ENST00000509990 NCAPD3P42695 1498 aa18.48■□□□□ 0.55
MATR3-237ENST00000509990 VPS8Q8N3P4 1428 aa18.46■□□□□ 0.55
MATR3-237ENST00000509990 KIF21BO75037 1637 aa18.43■□□□□ 0.54
MATR3-237ENST00000509990 NEUROD1Q13562 356 aa18.42■□□□□ 0.54
MATR3-237ENST00000509990 TOP2BQ02880 1626 aa18.41■□□□□ 0.54
MATR3-237ENST00000509990 CUX2O14529 1486 aa18.41■□□□□ 0.54
MATR3-237ENST00000509990 NESP48681 1621 aa18.4■□□□□ 0.54
MATR3-237ENST00000509990 KIF27Q86VH2 1401 aa18.38■□□□□ 0.53
MATR3-237ENST00000509990 ARAP1Q96P48 1450 aa18.38■□□□□ 0.53
MATR3-237ENST00000509990 ARID3CA6NKF2 412 aa18.37■□□□□ 0.53
MATR3-237ENST00000509990 CFTRP13569 1480 aa18.36■□□□□ 0.53
MATR3-237ENST00000509990 CADPSQ9ULU8 1353 aa18.34■□□□□ 0.53
MATR3-237ENST00000509990 ZNF316A6NFI3 1004 aaPredicted RBP18.33■□□□□ 0.52
MATR3-237ENST00000509990 RAD54L2Q9Y4B4 1467 aa18.32■□□□□ 0.52
MATR3-237ENST00000509990 PRXQ9BXM0 1461 aa18.32■□□□□ 0.52
MATR3-237ENST00000509990 IGF1RP08069 1367 aa18.32■□□□□ 0.52
MATR3-237ENST00000509990 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
MATR3-237ENST00000509990 MIER1Q8N108 512 aa18.31■□□□□ 0.52
MATR3-237ENST00000509990 CC2D2AQ9P2K1 1620 aa18.28■□□□□ 0.52
MATR3-237ENST00000509990 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
MATR3-237ENST00000509990 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
MATR3-237ENST00000509990 CARMIL1Q5VZK9 1371 aa18.27■□□□□ 0.51
MATR3-237ENST00000509990 FGD5Q6ZNL6 1462 aa18.26■□□□□ 0.51
MATR3-237ENST00000509990 TDRD9Q8NDG6 1382 aaKnown RBP18.23■□□□□ 0.51
MATR3-237ENST00000509990 ARHGAP35Q9NRY4 1499 aa18.22■□□□□ 0.51
MATR3-237ENST00000509990 GTF3C3Q9Y5Q9 886 aa18.21■□□□□ 0.51
MATR3-237ENST00000509990 BIVM-ERCC5R4GMW8 1640 aa18.21■□□□□ 0.51
MATR3-237ENST00000509990 HIRIP3Q9BW71 556 aaPredicted RBP18.2■□□□□ 0.5
MATR3-237ENST00000509990 FANCD2Q9BXW9 1451 aa18.19■□□□□ 0.5
MATR3-237ENST00000509990 ACIN1Q9UKV3 1341 aaKnown RBP18.19■□□□□ 0.5
MATR3-237ENST00000509990 SIN3AQ96ST3 1273 aa18.15■□□□□ 0.5
MATR3-237ENST00000509990 FHOD3Q2V2M9 1422 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms