RNA–Protein interactions for RNA: ENST00000506147.5

MATR3-235, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-235ENST00000506147 NISCHQ9Y2I1 1504 aa37.16■■■■□ 3.54
MATR3-235ENST00000506147 CCDC180Q9P1Z9 1646 aa32.72■■■□□ 2.83
MATR3-235ENST00000506147 ABCC9O60706 1549 aa32.21■■■□□ 2.75
MATR3-235ENST00000506147 DNAJC5BQ9UF47 199 aa31.23■■■□□ 2.59
MATR3-235ENST00000506147 ZCCHC6Q5VYS8 1495 aaKnown RBP31.11■■■□□ 2.57
MATR3-235ENST00000506147 DCAF1Q9Y4B6 1507 aa30.86■■■□□ 2.53
MATR3-235ENST00000506147 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
MATR3-235ENST00000506147 DCAF8L2P0C7V8 631 aa30.68■■■□□ 2.5
MATR3-235ENST00000506147 NACADO15069 1562 aa30.64■■■□□ 2.5
MATR3-235ENST00000506147 RB1CC1Q8TDY2 1594 aa30.47■■■□□ 2.47
MATR3-235ENST00000506147 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
MATR3-235ENST00000506147 PABPN1Q86U42 306 aaKnown RBP eCLIP29.8■■■□□ 2.36
MATR3-235ENST00000506147 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
MATR3-235ENST00000506147 SHROOM4Q9ULL8 1493 aa29.65■■■□□ 2.34
MATR3-235ENST00000506147 BICRAQ9NZM4 1560 aa29.47■■■□□ 2.31
MATR3-235ENST00000506147 DNAJC5Q9H3Z4 198 aa29.47■■■□□ 2.31
MATR3-235ENST00000506147 CECR2Q9BXF3 1484 aa29.14■■■□□ 2.26
MATR3-235ENST00000506147 CC2D2AQ9P2K1 1620 aa29.07■■■□□ 2.24
MATR3-235ENST00000506147 BAZ1AQ9NRL2 1556 aaPredicted RBP28.77■■■□□ 2.2
MATR3-235ENST00000506147 EIF4G1Q04637 1599 aaKnown RBP28.74■■■□□ 2.19
MATR3-235ENST00000506147 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
MATR3-235ENST00000506147 MROH2BQ7Z745 1585 aa28.6■■■□□ 2.17
MATR3-235ENST00000506147 RSF1Q96T23 1441 aaPredicted RBP28.58■■■□□ 2.17
MATR3-235ENST00000506147 PEG3Q9GZU2 1588 aa28.43■■■□□ 2.14
MATR3-235ENST00000506147 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
MATR3-235ENST00000506147 ATAD2BQ9ULI0 1458 aa28.35■■■□□ 2.13
MATR3-235ENST00000506147 SUPT5HO00267 1087 aaKnown RBP28.3■■■□□ 2.12
MATR3-235ENST00000506147 WIZO95785 1651 aa28.29■■■□□ 2.12
MATR3-235ENST00000506147 NCAPD3P42695 1498 aa28.28■■■□□ 2.12
MATR3-235ENST00000506147 CUX2O14529 1486 aa28.22■■■□□ 2.11
MATR3-235ENST00000506147 HMGXB3Q12766 1538 aa28.18■■■□□ 2.1
MATR3-235ENST00000506147 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
MATR3-235ENST00000506147 TOP2AP11388 1531 aaKnown RBP28.11■■■□□ 2.09
MATR3-235ENST00000506147 ERCC6Q03468 1493 aa27.87■■■□□ 2.05
MATR3-235ENST00000506147 CCDC88BA6NC98 1476 aa27.76■■■□□ 2.04
MATR3-235ENST00000506147 TRIM41Q8WV44 630 aa27.68■■■□□ 2.02
MATR3-235ENST00000506147 CADPSQ9ULU8 1353 aa27.48■■□□□ 1.99
MATR3-235ENST00000506147 CFTRP13569 1480 aa27.46■■□□□ 1.99
MATR3-235ENST00000506147 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.97
MATR3-235ENST00000506147 NESP48681 1621 aa27.38■■□□□ 1.97
MATR3-235ENST00000506147 THOC2Q8NI27 1593 aaKnown RBP27.34■■□□□ 1.97
MATR3-235ENST00000506147 PRDM2Q13029 1718 aa27.21■■□□□ 1.95
MATR3-235ENST00000506147 PDS5BQ9NTI5 1447 aa27.21■■□□□ 1.95
MATR3-235ENST00000506147 FANCD2Q9BXW9 1451 aa27.12■■□□□ 1.93
MATR3-235ENST00000506147 CEP164Q9UPV0 1460 aa27.02■■□□□ 1.92
MATR3-235ENST00000506147 KIF21AQ7Z4S6 1674 aa27.01■■□□□ 1.92
MATR3-235ENST00000506147 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.96e-9■■■■■ 30.6
MATR3-235ENST00000506147 ABCC8Q09428 1581 aa26.89■■□□□ 1.9
MATR3-235ENST00000506147 CHIC1Q5VXU3 224 aa26.89■■□□□ 1.9
MATR3-235ENST00000506147 MRC2Q9UBG0 1479 aa26.85■■□□□ 1.89
MATR3-235ENST00000506147 CUX1P39880 1505 aa26.8■■□□□ 1.88
MATR3-235ENST00000506147 DNMBPQ6XZF7 1577 aa26.8■■□□□ 1.88
MATR3-235ENST00000506147 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
MATR3-235ENST00000506147 TOP2BQ02880 1626 aa26.78■■□□□ 1.88
MATR3-235ENST00000506147 TOPBP1Q92547 1522 aa26.76■■□□□ 1.87
MATR3-235ENST00000506147 BIVM-ERCC5R4GMW8 1640 aa26.76■■□□□ 1.87
MATR3-235ENST00000506147 SYNJ1O43426 1573 aa26.75■■□□□ 1.87
MATR3-235ENST00000506147 OSCARQ8IYS5 282 aa26.73■■□□□ 1.87
MATR3-235ENST00000506147 WDR62O43379 1518 aa26.73■■□□□ 1.87
MATR3-235ENST00000506147 FGD5Q6ZNL6 1462 aa26.6■■□□□ 1.85
MATR3-235ENST00000506147 POLA1P09884 1462 aaPredicted RBP26.58■■□□□ 1.85
MATR3-235ENST00000506147 RIMBP3CA6NJZ7 1639 aa26.55■■□□□ 1.84
MATR3-235ENST00000506147 RIMBP3BA6NNM3 1639 aa26.55■■□□□ 1.84
MATR3-235ENST00000506147 RIMBP3Q9UFD9 1639 aa26.55■■□□□ 1.84
MATR3-235ENST00000506147 SOGA1O94964 1423 aa26.5■■□□□ 1.83
MATR3-235ENST00000506147 IFT140Q96RY7 1462 aa26.46■■□□□ 1.83
MATR3-235ENST00000506147 ABCA10Q8WWZ4 1543 aa26.43■■□□□ 1.82
MATR3-235ENST00000506147 RAD54L2Q9Y4B4 1467 aa26.42■■□□□ 1.82
MATR3-235ENST00000506147 TARBP1Q13395 1621 aaKnown RBP26.39■■□□□ 1.82
MATR3-235ENST00000506147 EEA1Q15075 1411 aa26.35■■□□□ 1.81
MATR3-235ENST00000506147 ARHGEF11O15085 1522 aa26.34■■□□□ 1.81
MATR3-235ENST00000506147 KIF27Q86VH2 1401 aa26.33■■□□□ 1.81
MATR3-235ENST00000506147 WDR97A6NE52 1622 aa26.32■■□□□ 1.8
MATR3-235ENST00000506147 AEBP2Q6ZN18 517 aaPredicted RBP26.26■■□□□ 1.79
MATR3-235ENST00000506147 TDRD9Q8NDG6 1382 aaKnown RBP26.23■■□□□ 1.79
MATR3-235ENST00000506147 TRHP20396 242 aaPredicted RBP26.22■■□□□ 1.79
MATR3-235ENST00000506147 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
MATR3-235ENST00000506147 RUSC2Q8N2Y8 1516 aa26.2■■□□□ 1.79
MATR3-235ENST00000506147 GAPVD1Q14C86 1478 aa26.2■■□□□ 1.78
MATR3-235ENST00000506147 ZNF608Q9ULD9 1512 aaPredicted RBP26.19■■□□□ 1.78
MATR3-235ENST00000506147 CYB5RLQ6IPT4 315 aa26.18■■□□□ 1.78
MATR3-235ENST00000506147 CSRNP3Q8WYN3 585 aa26.16■■□□□ 1.78
MATR3-235ENST00000506147 AQRO60306 1485 aaKnown RBP eCLIP26.16■■□□□ 1.783e-7■■■■□ 24.7
MATR3-235ENST00000506147 ERICH3Q5RHP9 1530 aa26.14■■□□□ 1.77
MATR3-235ENST00000506147 IGF1RP08069 1367 aa26.13■■□□□ 1.77
MATR3-235ENST00000506147 EIF4G3O43432 1585 aaKnown RBP26.12■■□□□ 1.77
MATR3-235ENST00000506147 GRIN2BQ13224 1484 aa26.12■■□□□ 1.77
MATR3-235ENST00000506147 FAM9AQ8IZU1 332 aaPredicted RBP26.1■■□□□ 1.77
MATR3-235ENST00000506147 PBRM1Q86U86 1689 aa26.03■■□□□ 1.76
MATR3-235ENST00000506147 ARAP1Q96P48 1450 aa26.01■■□□□ 1.75
MATR3-235ENST00000506147 PRXQ9BXM0 1461 aa26■■□□□ 1.75
MATR3-235ENST00000506147 CUL7Q14999 1698 aa25.99■■□□□ 1.75
MATR3-235ENST00000506147 MAGI1Q96QZ7 1491 aaPredicted RBP25.99■■□□□ 1.75
MATR3-235ENST00000506147 CARMIL1Q5VZK9 1371 aa25.99■■□□□ 1.75
MATR3-235ENST00000506147 FHAD1B1AJZ9 1412 aa25.96■■□□□ 1.75
MATR3-235ENST00000506147 KIF21BO75037 1637 aa25.94■■□□□ 1.74
MATR3-235ENST00000506147 SNAPC4Q5SXM2 1469 aa25.93■■□□□ 1.74
MATR3-235ENST00000506147 RAPGEF2Q9Y4G8 1499 aa25.91■■□□□ 1.74
MATR3-235ENST00000506147 ADAMTS12P58397 1594 aa25.9■■□□□ 1.74
MATR3-235ENST00000506147 SYNJ2O15056 1496 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms