RNA–Protein interactions for RNA: ENST00000509644.5

MATR3-236, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-236ENST00000509644 NISCHQ9Y2I1 1504 aa33.01■■■□□ 2.87
MATR3-236ENST00000509644 ABCC9O60706 1549 aa29.81■■■□□ 2.36
MATR3-236ENST00000509644 CCDC180Q9P1Z9 1646 aa29.63■■■□□ 2.33
MATR3-236ENST00000509644 RB1CC1Q8TDY2 1594 aa28.27■■■□□ 2.12
MATR3-236ENST00000509644 DNAJC5BQ9UF47 199 aa28.25■■■□□ 2.11
MATR3-236ENST00000509644 NACADO15069 1562 aa28.07■■■□□ 2.08
MATR3-236ENST00000509644 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
MATR3-236ENST00000509644 PABPN1Q86U42 306 aaKnown RBP eCLIP27.73■■■□□ 2.03
MATR3-236ENST00000509644 MYO15BQ96JP2 1530 aa27.71■■■□□ 2.03
MATR3-236ENST00000509644 UNC13AQ9UPW8 1703 aa27.67■■■□□ 2.02
MATR3-236ENST00000509644 BICRAQ9NZM4 1560 aa27.59■■■□□ 2.01
MATR3-236ENST00000509644 ZCCHC6Q5VYS8 1495 aaKnown RBP27.34■■□□□ 1.97
MATR3-236ENST00000509644 DCAF1Q9Y4B6 1507 aa27.28■■□□□ 1.96
MATR3-236ENST00000509644 SHROOM4Q9ULL8 1493 aa27.13■■□□□ 1.93
MATR3-236ENST00000509644 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
MATR3-236ENST00000509644 CC2D2AQ9P2K1 1620 aa26.93■■□□□ 1.9
MATR3-236ENST00000509644 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
MATR3-236ENST00000509644 EIF4G1Q04637 1599 aaKnown RBP26.85■■□□□ 1.89
MATR3-236ENST00000509644 DNAJC5Q9H3Z4 198 aa25.98■■□□□ 1.75
MATR3-236ENST00000509644 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
MATR3-236ENST00000509644 ATAD2BQ9ULI0 1458 aa25.86■■□□□ 1.73
MATR3-236ENST00000509644 CUX2O14529 1486 aa25.76■■□□□ 1.71
MATR3-236ENST00000509644 SMARCA4P51532 1647 aa25.76■■□□□ 1.71
MATR3-236ENST00000509644 HMGXB3Q12766 1538 aa25.73■■□□□ 1.71
MATR3-236ENST00000509644 SMARCA2P51531 1590 aa25.71■■□□□ 1.71
MATR3-236ENST00000509644 ERCC6Q03468 1493 aa25.66■■□□□ 1.7
MATR3-236ENST00000509644 NESP48681 1621 aa25.61■■□□□ 1.69
MATR3-236ENST00000509644 PEG3Q9GZU2 1588 aa25.57■■□□□ 1.68
MATR3-236ENST00000509644 BAZ1AQ9NRL2 1556 aaPredicted RBP25.57■■□□□ 1.68
MATR3-236ENST00000509644 BAZ1BQ9UIG0 1483 aaKnown RBP25.53■■□□□ 1.68
MATR3-236ENST00000509644 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
MATR3-236ENST00000509644 THOC2Q8NI27 1593 aaKnown RBP25.38■■□□□ 1.65
MATR3-236ENST00000509644 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
MATR3-236ENST00000509644 KIF21AQ7Z4S6 1674 aa25.21■■□□□ 1.63
MATR3-236ENST00000509644 PDS5BQ9NTI5 1447 aa25.19■■□□□ 1.62
MATR3-236ENST00000509644 CADPSQ9ULU8 1353 aa25.15■■□□□ 1.62
MATR3-236ENST00000509644 WIZO95785 1651 aa25.08■■□□□ 1.61
MATR3-236ENST00000509644 MRC2Q9UBG0 1479 aa25.01■■□□□ 1.59
MATR3-236ENST00000509644 WDR62O43379 1518 aa24.99■■□□□ 1.59
MATR3-236ENST00000509644 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
MATR3-236ENST00000509644 CFTRP13569 1480 aa24.85■■□□□ 1.57
MATR3-236ENST00000509644 CEP164Q9UPV0 1460 aa24.84■■□□□ 1.57
MATR3-236ENST00000509644 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.57
MATR3-236ENST00000509644 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
MATR3-236ENST00000509644 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
MATR3-236ENST00000509644 TRIM41Q8WV44 630 aa24.64■■□□□ 1.54
MATR3-236ENST00000509644 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
MATR3-236ENST00000509644 OSCARQ8IYS5 282 aa24.51■■□□□ 1.51
MATR3-236ENST00000509644 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
MATR3-236ENST00000509644 ZNF608Q9ULD9 1512 aaPredicted RBP24.41■■□□□ 1.5
MATR3-236ENST00000509644 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
MATR3-236ENST00000509644 TOPBP1Q92547 1522 aa24.36■■□□□ 1.49
MATR3-236ENST00000509644 RIMBP3CA6NJZ7 1639 aa24.26■■□□□ 1.47
MATR3-236ENST00000509644 RIMBP3BA6NNM3 1639 aa24.26■■□□□ 1.47
MATR3-236ENST00000509644 RIMBP3Q9UFD9 1639 aa24.26■■□□□ 1.47
MATR3-236ENST00000509644 ABCC8Q09428 1581 aa24.24■■□□□ 1.47
MATR3-236ENST00000509644 DNMBPQ6XZF7 1577 aa24.24■■□□□ 1.47
MATR3-236ENST00000509644 EIF4G3O43432 1585 aaKnown RBP24.21■■□□□ 1.47
MATR3-236ENST00000509644 TARBP1Q13395 1621 aaKnown RBP24.19■■□□□ 1.46
MATR3-236ENST00000509644 ARHGEF11O15085 1522 aa24.18■■□□□ 1.46
MATR3-236ENST00000509644 AQRO60306 1485 aaKnown RBP eCLIP24.14■■□□□ 1.463e-7■■■■□ 23.6
MATR3-236ENST00000509644 POLA1P09884 1462 aaPredicted RBP24.12■■□□□ 1.45
MATR3-236ENST00000509644 CHD1O14646 1710 aa24.04■■□□□ 1.44
MATR3-236ENST00000509644 RAD54L2Q9Y4B4 1467 aa24.03■■□□□ 1.44
MATR3-236ENST00000509644 ARAP1Q96P48 1450 aa23.96■■□□□ 1.43
MATR3-236ENST00000509644 SOGA1O94964 1423 aa23.96■■□□□ 1.43
MATR3-236ENST00000509644 TDRD9Q8NDG6 1382 aaKnown RBP23.95■■□□□ 1.42
MATR3-236ENST00000509644 CYB5RLQ6IPT4 315 aa23.95■■□□□ 1.42
MATR3-236ENST00000509644 FGD5Q6ZNL6 1462 aa23.92■■□□□ 1.42
MATR3-236ENST00000509644 CUX1P39880 1505 aa23.91■■□□□ 1.42
MATR3-236ENST00000509644 FBLN2P98095 1184 aa23.88■■□□□ 1.41
MATR3-236ENST00000509644 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
MATR3-236ENST00000509644 SNAPC4Q5SXM2 1469 aa23.87■■□□□ 1.41
MATR3-236ENST00000509644 CLASP1Q7Z460 1538 aa23.85■■□□□ 1.41
MATR3-236ENST00000509644 MAGI1Q96QZ7 1491 aaPredicted RBP23.8■■□□□ 1.4
MATR3-236ENST00000509644 GRIN2BQ13224 1484 aa23.77■■□□□ 1.4
MATR3-236ENST00000509644 SYNJ2O15056 1496 aa23.73■■□□□ 1.39
MATR3-236ENST00000509644 CHMP7Q8WUX9 453 aaPredicted RBP23.72■■□□□ 1.39
MATR3-236ENST00000509644 SYNJ1O43426 1573 aa23.71■■□□□ 1.39
MATR3-236ENST00000509644 GAPVD1Q14C86 1478 aa23.67■■□□□ 1.38
MATR3-236ENST00000509644 ABCA10Q8WWZ4 1543 aa23.66■■□□□ 1.38
MATR3-236ENST00000509644 TRHP20396 242 aaPredicted RBP23.65■■□□□ 1.38
MATR3-236ENST00000509644 ABCA5Q8WWZ7 1642 aa23.64■■□□□ 1.38
MATR3-236ENST00000509644 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
MATR3-236ENST00000509644 SUPT5HO00267 1087 aaKnown RBP23.49■■□□□ 1.35
MATR3-236ENST00000509644 GRIN2AQ12879 1464 aa23.49■■□□□ 1.35
MATR3-236ENST00000509644 WRNQ14191 1432 aaPredicted RBP eCLIP23.48■■□□□ 1.356e-9■■■■■ 30.6
MATR3-236ENST00000509644 ERCC6L2Q5T890 1561 aa23.48■■□□□ 1.35
MATR3-236ENST00000509644 NUP160Q12769 1436 aa23.46■■□□□ 1.35
MATR3-236ENST00000509644 ADAMTS12P58397 1594 aa23.45■■□□□ 1.34
MATR3-236ENST00000509644 TOP2BQ02880 1626 aa23.44■■□□□ 1.34
MATR3-236ENST00000509644 BIVM-ERCC5R4GMW8 1640 aa23.44■■□□□ 1.34
MATR3-236ENST00000509644 CEP170Q5SW79 1584 aa23.44■■□□□ 1.34
MATR3-236ENST00000509644 FHAD1B1AJZ9 1412 aa23.37■■□□□ 1.33
MATR3-236ENST00000509644 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
MATR3-236ENST00000509644 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.33
MATR3-236ENST00000509644 PRG4Q92954 1404 aaPredicted RBP23.18■■□□□ 1.3
MATR3-236ENST00000509644 JPH4Q96JJ6 628 aa23.15■■□□□ 1.3
MATR3-236ENST00000509644 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
MATR3-236ENST00000509644 KIF13AQ9H1H9 1805 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms