RNA–Protein interactions for RNA: ENST00000502499.5

MATR3-203, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-203ENST00000502499 NISCHQ9Y2I1 1504 aa18.17■□□□□ 0.5
MATR3-203ENST00000502499 ABCC9O60706 1549 aa17.08■□□□□ 0.32
MATR3-203ENST00000502499 CCDC180Q9P1Z9 1646 aa16.75■□□□□ 0.27
MATR3-203ENST00000502499 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
MATR3-203ENST00000502499 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
MATR3-203ENST00000502499 NACADO15069 1562 aa15.97■□□□□ 0.15
MATR3-203ENST00000502499 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.15
MATR3-203ENST00000502499 UNC13AQ9UPW8 1703 aa15.75■□□□□ 0.11
MATR3-203ENST00000502499 BICRAQ9NZM4 1560 aa15.72■□□□□ 0.11
MATR3-203ENST00000502499 SHROOM4Q9ULL8 1493 aa15.7■□□□□ 0.1
MATR3-203ENST00000502499 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.12e-7■■□□□ 12.6
MATR3-203ENST00000502499 MYO15BQ96JP2 1530 aa15.68■□□□□ 0.1
MATR3-203ENST00000502499 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
MATR3-203ENST00000502499 CC2D2AQ9P2K1 1620 aa15.52■□□□□ 0.08
MATR3-203ENST00000502499 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
MATR3-203ENST00000502499 CUX2O14529 1486 aa15.28■□□□□ 0.04
MATR3-203ENST00000502499 DCAF8L2P0C7V8 631 aa15.17■□□□□ 0.02
MATR3-203ENST00000502499 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
MATR3-203ENST00000502499 ZCCHC6Q5VYS8 1495 aaKnown RBP14.93□□□□□ -0.02
MATR3-203ENST00000502499 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
MATR3-203ENST00000502499 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
MATR3-203ENST00000502499 NCAPD3P42695 1498 aa14.74□□□□□ -0.05
MATR3-203ENST00000502499 THOC2Q8NI27 1593 aaKnown RBP14.66□□□□□ -0.06
MATR3-203ENST00000502499 TRIM41Q8WV44 630 aa14.65□□□□□ -0.06
MATR3-203ENST00000502499 HMGXB3Q12766 1538 aa14.58□□□□□ -0.08
MATR3-203ENST00000502499 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
MATR3-203ENST00000502499 LAMC3Q9Y6N6 1575 aa14.5□□□□□ -0.09
MATR3-203ENST00000502499 SMARCA2P51531 1590 aa14.48□□□□□ -0.09
MATR3-203ENST00000502499 NESP48681 1621 aa14.48□□□□□ -0.09
MATR3-203ENST00000502499 PDS5BQ9NTI5 1447 aa14.38□□□□□ -0.11
MATR3-203ENST00000502499 BAZ1AQ9NRL2 1556 aaPredicted RBP14.36□□□□□ -0.11
MATR3-203ENST00000502499 KIF21AQ7Z4S6 1674 aa14.35□□□□□ -0.11
MATR3-203ENST00000502499 WDR62O43379 1518 aa14.33□□□□□ -0.11
MATR3-203ENST00000502499 PEG3Q9GZU2 1588 aa14.33□□□□□ -0.12
MATR3-203ENST00000502499 SMARCA4P51532 1647 aa14.3□□□□□ -0.12
MATR3-203ENST00000502499 OSCARQ8IYS5 282 aa14.29□□□□□ -0.12
MATR3-203ENST00000502499 MRC2Q9UBG0 1479 aa14.29□□□□□ -0.12
MATR3-203ENST00000502499 BAZ1BQ9UIG0 1483 aaKnown RBP14.26□□□□□ -0.13
MATR3-203ENST00000502499 RIMBP3CA6NJZ7 1639 aa14.21□□□□□ -0.13
MATR3-203ENST00000502499 RIMBP3BA6NNM3 1639 aa14.21□□□□□ -0.13
MATR3-203ENST00000502499 RIMBP3Q9UFD9 1639 aa14.21□□□□□ -0.13
MATR3-203ENST00000502499 CADPSQ9ULU8 1353 aa14.17□□□□□ -0.14
MATR3-203ENST00000502499 ARHGEF11O15085 1522 aa14.09□□□□□ -0.15
MATR3-203ENST00000502499 CEP164Q9UPV0 1460 aa14.05□□□□□ -0.16
MATR3-203ENST00000502499 AEBP2Q6ZN18 517 aaPredicted RBP14.03□□□□□ -0.16
MATR3-203ENST00000502499 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
MATR3-203ENST00000502499 RSF1Q96T23 1441 aaPredicted RBP13.92□□□□□ -0.18
MATR3-203ENST00000502499 ARAP1Q96P48 1450 aa13.91□□□□□ -0.18
MATR3-203ENST00000502499 CFTRP13569 1480 aa13.9□□□□□ -0.18
MATR3-203ENST00000502499 MROH2BQ7Z745 1585 aa13.89□□□□□ -0.19
MATR3-203ENST00000502499 URB2Q14146 1524 aaKnown RBP13.89□□□□□ -0.19
MATR3-203ENST00000502499 IFT140Q96RY7 1462 aa13.86□□□□□ -0.19
MATR3-203ENST00000502499 TRHP20396 242 aaPredicted RBP13.86□□□□□ -0.19
MATR3-203ENST00000502499 CYB5RLQ6IPT4 315 aa13.85□□□□□ -0.19
MATR3-203ENST00000502499 ZNF608Q9ULD9 1512 aaPredicted RBP13.76□□□□□ -0.21
MATR3-203ENST00000502499 PRDM2Q13029 1718 aa13.74□□□□□ -0.21
MATR3-203ENST00000502499 CHD1O14646 1710 aa13.72□□□□□ -0.21
MATR3-203ENST00000502499 EIF4G3O43432 1585 aaKnown RBP13.72□□□□□ -0.21
MATR3-203ENST00000502499 ABCC8Q09428 1581 aa13.7□□□□□ -0.22
MATR3-203ENST00000502499 CLASP1Q7Z460 1538 aa13.68□□□□□ -0.22
MATR3-203ENST00000502499 WIZO95785 1651 aa13.65□□□□□ -0.22
MATR3-203ENST00000502499 TOPBP1Q92547 1522 aa13.63□□□□□ -0.23
MATR3-203ENST00000502499 WDR97A6NE52 1622 aa13.62□□□□□ -0.23
MATR3-203ENST00000502499 TARBP1Q13395 1621 aaKnown RBP13.62□□□□□ -0.23
MATR3-203ENST00000502499 ILDR1Q86SU0 546 aaPredicted RBP13.58□□□□□ -0.23
MATR3-203ENST00000502499 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
MATR3-203ENST00000502499 TOP2AP11388 1531 aaKnown RBP13.56□□□□□ -0.24
MATR3-203ENST00000502499 SYNJ1O43426 1573 aa13.55□□□□□ -0.24
MATR3-203ENST00000502499 AQRO60306 1485 aaKnown RBP eCLIP13.52□□□□□ -0.254e-7■■■■□ 22.7
MATR3-203ENST00000502499 MAGI1Q96QZ7 1491 aaPredicted RBP13.49□□□□□ -0.25
MATR3-203ENST00000502499 GAPVD1Q14C86 1478 aa13.48□□□□□ -0.25
MATR3-203ENST00000502499 POLA1P09884 1462 aaPredicted RBP13.43□□□□□ -0.26
MATR3-203ENST00000502499 SYNJ2O15056 1496 aa13.41□□□□□ -0.26
MATR3-203ENST00000502499 SNAPC4Q5SXM2 1469 aa13.41□□□□□ -0.26
MATR3-203ENST00000502499 KIF13AQ9H1H9 1805 aa13.4□□□□□ -0.26
MATR3-203ENST00000502499 FBLN2P98095 1184 aa13.39□□□□□ -0.27
MATR3-203ENST00000502499 GRIN2BQ13224 1484 aa13.36□□□□□ -0.27
MATR3-203ENST00000502499 KDM4FA0A1W2PPD8 638 aa13.34□□□□□ -0.27
MATR3-203ENST00000502499 CCDC88BA6NC98 1476 aa13.34□□□□□ -0.27
MATR3-203ENST00000502499 CHMP7Q8WUX9 453 aaPredicted RBP13.34□□□□□ -0.27
MATR3-203ENST00000502499 SOGA1O94964 1423 aa13.33□□□□□ -0.28
MATR3-203ENST00000502499 ERCC6L2Q5T890 1561 aa13.32□□□□□ -0.28
MATR3-203ENST00000502499 TDRD9Q8NDG6 1382 aaKnown RBP13.29□□□□□ -0.28
MATR3-203ENST00000502499 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
MATR3-203ENST00000502499 SHROOM2Q13796 1616 aa13.28□□□□□ -0.28
MATR3-203ENST00000502499 ABCC10Q5T3U5 1492 aa13.27□□□□□ -0.29
MATR3-203ENST00000502499 MAPKBP1O60336 1514 aa13.25□□□□□ -0.29
MATR3-203ENST00000502499 CEP170Q5SW79 1584 aa13.23□□□□□ -0.29
MATR3-203ENST00000502499 PBRM1Q86U86 1689 aa13.23□□□□□ -0.29
MATR3-203ENST00000502499 NUP160Q12769 1436 aa13.23□□□□□ -0.29
MATR3-203ENST00000502499 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.29
MATR3-203ENST00000502499 KDM6BO15054 1643 aa13.21□□□□□ -0.3
MATR3-203ENST00000502499 DIP2BQ9P265 1576 aa13.19□□□□□ -0.3
MATR3-203ENST00000502499 ABCA5Q8WWZ7 1642 aa13.18□□□□□ -0.3
MATR3-203ENST00000502499 GRIN2AQ12879 1464 aa13.17□□□□□ -0.3
MATR3-203ENST00000502499 FBXO41Q8TF61 875 aa13.16□□□□□ -0.3
MATR3-203ENST00000502499 HECW2Q9P2P5 1572 aa13.14□□□□□ -0.31
MATR3-203ENST00000502499 ABCA10Q8WWZ4 1543 aa13.14□□□□□ -0.31
MATR3-203ENST00000502499 CUX1P39880 1505 aa13.11□□□□□ -0.31
MATR3-203ENST00000502499 FAM69CQ0P6D2 419 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms