RNA–Protein interactions for RNA: ENST00000505016.2

MATR3-234, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-234ENST00000505016 AEBP2Q6ZN18 517 aaPredicted RBP32.4■■■□□ 2.78
MATR3-234ENST00000505016 CHIC1Q5VXU3 224 aa31.18■■■□□ 2.58
MATR3-234ENST00000505016 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
MATR3-234ENST00000505016 PHF23Q9BUL5 403 aaPredicted RBP27.48■■□□□ 1.99
MATR3-234ENST00000505016 CCDC180Q9P1Z9 1646 aa27.44■■□□□ 1.98
MATR3-234ENST00000505016 ABCC9O60706 1549 aa27.42■■□□□ 1.98
MATR3-234ENST00000505016 SENP3Q9H4L4 574 aaPredicted RBP27.41■■□□□ 1.98
MATR3-234ENST00000505016 RB1CC1Q8TDY2 1594 aa26.1■■□□□ 1.77
MATR3-234ENST00000505016 NACADO15069 1562 aa25.93■■□□□ 1.74
MATR3-234ENST00000505016 DCAF8L2P0C7V8 631 aa25.82■■□□□ 1.72
MATR3-234ENST00000505016 DNAJC5BQ9UF47 199 aa25.71■■□□□ 1.71
MATR3-234ENST00000505016 FOXD1Q16676 465 aa25.59■■□□□ 1.69
MATR3-234ENST00000505016 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.68
MATR3-234ENST00000505016 PABPN1Q86U42 306 aaKnown RBP eCLIP25.54■■□□□ 1.68
MATR3-234ENST00000505016 UNC13AQ9UPW8 1703 aa25.53■■□□□ 1.68
MATR3-234ENST00000505016 ZCCHC6Q5VYS8 1495 aaKnown RBP25.39■■□□□ 1.65
MATR3-234ENST00000505016 BICRAQ9NZM4 1560 aa25.37■■□□□ 1.65
MATR3-234ENST00000505016 DCAF1Q9Y4B6 1507 aa25.27■■□□□ 1.64
MATR3-234ENST00000505016 PLPPR3Q6T4P5 718 aa25.1■■□□□ 1.61
MATR3-234ENST00000505016 SCRIBQ14160 1630 aa25.03■■□□□ 1.6
MATR3-234ENST00000505016 SHROOM4Q9ULL8 1493 aa24.97■■□□□ 1.59
MATR3-234ENST00000505016 CC2D2AQ9P2K1 1620 aa24.77■■□□□ 1.56
MATR3-234ENST00000505016 EIF4G1Q04637 1599 aaKnown RBP24.72■■□□□ 1.55
MATR3-234ENST00000505016 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
MATR3-234ENST00000505016 PPP6R1Q9UPN7 881 aa24.4■■□□□ 1.5
MATR3-234ENST00000505016 ADRA2BP18089 450 aa24.3■■□□□ 1.48
MATR3-234ENST00000505016 PIAS4Q8N2W9 510 aaPredicted RBP23.96■■□□□ 1.43
MATR3-234ENST00000505016 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
MATR3-234ENST00000505016 ATAD2BQ9ULI0 1458 aa23.89■■□□□ 1.42
MATR3-234ENST00000505016 SMARCA4P51532 1647 aa23.88■■□□□ 1.41
MATR3-234ENST00000505016 SMARCA2P51531 1590 aa23.8■■□□□ 1.4
MATR3-234ENST00000505016 HMGXB3Q12766 1538 aa23.77■■□□□ 1.4
MATR3-234ENST00000505016 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
MATR3-234ENST00000505016 BAZ1BQ9UIG0 1483 aaKnown RBP23.65■■□□□ 1.38
MATR3-234ENST00000505016 ERCC6Q03468 1493 aa23.64■■□□□ 1.38
MATR3-234ENST00000505016 PEG3Q9GZU2 1588 aa23.64■■□□□ 1.37
MATR3-234ENST00000505016 MSH5O43196 834 aa23.63■■□□□ 1.37
MATR3-234ENST00000505016 MROH2BQ7Z745 1585 aa23.61■■□□□ 1.37
MATR3-234ENST00000505016 CUX2O14529 1486 aa23.58■■□□□ 1.37
MATR3-234ENST00000505016 NESP48681 1621 aa23.58■■□□□ 1.36
MATR3-234ENST00000505016 DNAJC5Q9H3Z4 198 aa23.52■■□□□ 1.36
MATR3-234ENST00000505016 LAMC3Q9Y6N6 1575 aa23.39■■□□□ 1.33
MATR3-234ENST00000505016 WIZO95785 1651 aa23.33■■□□□ 1.33
MATR3-234ENST00000505016 THOC2Q8NI27 1593 aaKnown RBP23.32■■□□□ 1.32
MATR3-234ENST00000505016 KIF21AQ7Z4S6 1674 aa23.27■■□□□ 1.32
MATR3-234ENST00000505016 PDS5BQ9NTI5 1447 aa23.25■■□□□ 1.31
MATR3-234ENST00000505016 CADPSQ9ULU8 1353 aa23.22■■□□□ 1.31
MATR3-234ENST00000505016 RSF1Q96T23 1441 aaPredicted RBP23.13■■□□□ 1.29
MATR3-234ENST00000505016 MRC2Q9UBG0 1479 aa23.06■■□□□ 1.28
MATR3-234ENST00000505016 TOP2AP11388 1531 aaKnown RBP23.02■■□□□ 1.28
MATR3-234ENST00000505016 WDR62O43379 1518 aa23.01■■□□□ 1.27
MATR3-234ENST00000505016 CFTRP13569 1480 aa22.98■■□□□ 1.27
MATR3-234ENST00000505016 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
MATR3-234ENST00000505016 FANCD2Q9BXW9 1451 aa22.96■■□□□ 1.27
MATR3-234ENST00000505016 URB2Q14146 1524 aaKnown RBP22.78■■□□□ 1.24
MATR3-234ENST00000505016 CCDC88BA6NC98 1476 aa22.78■■□□□ 1.24
MATR3-234ENST00000505016 PRDM2Q13029 1718 aa22.74■■□□□ 1.23
MATR3-234ENST00000505016 TOPBP1Q92547 1522 aa22.53■■□□□ 1.2
MATR3-234ENST00000505016 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
MATR3-234ENST00000505016 OSCARQ8IYS5 282 aa22.52■■□□□ 1.2
MATR3-234ENST00000505016 IFT140Q96RY7 1462 aa22.5■■□□□ 1.19
MATR3-234ENST00000505016 ZNF608Q9ULD9 1512 aaPredicted RBP22.5■■□□□ 1.19
MATR3-234ENST00000505016 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
MATR3-234ENST00000505016 DNMBPQ6XZF7 1577 aa22.45■■□□□ 1.18
MATR3-234ENST00000505016 EIF4G3O43432 1585 aaKnown RBP22.37■■□□□ 1.17
MATR3-234ENST00000505016 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
MATR3-234ENST00000505016 POLA1P09884 1462 aaPredicted RBP22.31■■□□□ 1.16
MATR3-234ENST00000505016 AQRO60306 1485 aaKnown RBP eCLIP22.3■■□□□ 1.164e-10■■■■■ 32.5
MATR3-234ENST00000505016 POTEDQ86YR6 584 aa22.29■■□□□ 1.16
MATR3-234ENST00000505016 RIMBP3CA6NJZ7 1639 aa22.24■■□□□ 1.15
MATR3-234ENST00000505016 RIMBP3BA6NNM3 1639 aa22.24■■□□□ 1.15
MATR3-234ENST00000505016 RIMBP3Q9UFD9 1639 aa22.24■■□□□ 1.15
MATR3-234ENST00000505016 RAD54L2Q9Y4B4 1467 aa22.24■■□□□ 1.15
MATR3-234ENST00000505016 SOGA1O94964 1423 aa22.21■■□□□ 1.15
MATR3-234ENST00000505016 MAPK8IP2Q13387 824 aaPredicted RBP22.2■■□□□ 1.14
MATR3-234ENST00000505016 CHD1O14646 1710 aa22.19■■□□□ 1.14
MATR3-234ENST00000505016 CUX1P39880 1505 aa22.18■■□□□ 1.14
MATR3-234ENST00000505016 FGD5Q6ZNL6 1462 aa22.18■■□□□ 1.14
MATR3-234ENST00000505016 ARHGEF11O15085 1522 aa22.17■■□□□ 1.14
MATR3-234ENST00000505016 TDRD9Q8NDG6 1382 aaKnown RBP22.16■■□□□ 1.14
MATR3-234ENST00000505016 SUPT5HO00267 1087 aaKnown RBP22.14■■□□□ 1.13
MATR3-234ENST00000505016 FBLN2P98095 1184 aa22.13■■□□□ 1.13
MATR3-234ENST00000505016 PPP4R3CPQ6ZMV5 832 aa22.12■■□□□ 1.13
MATR3-234ENST00000505016 SCAF1Q9H7N4 1312 aaKnown RBP22.08■■□□□ 1.13
MATR3-234ENST00000505016 WDR97A6NE52 1622 aa22.08■■□□□ 1.13
MATR3-234ENST00000505016 SNAPC4Q5SXM2 1469 aa22.07■■□□□ 1.12
MATR3-234ENST00000505016 CYB5RLQ6IPT4 315 aa22■■□□□ 1.11
MATR3-234ENST00000505016 GRIN2BQ13224 1484 aa22■■□□□ 1.11
MATR3-234ENST00000505016 MAGI1Q96QZ7 1491 aaPredicted RBP21.99■■□□□ 1.11
MATR3-234ENST00000505016 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
MATR3-234ENST00000505016 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
MATR3-234ENST00000505016 GAPVD1Q14C86 1478 aa21.94■■□□□ 1.1
MATR3-234ENST00000505016 CLASP1Q7Z460 1538 aa21.94■■□□□ 1.1
MATR3-234ENST00000505016 PBRM1Q86U86 1689 aa21.93■■□□□ 1.1
MATR3-234ENST00000505016 ABCA10Q8WWZ4 1543 aa21.92■■□□□ 1.1
MATR3-234ENST00000505016 SYNJ2O15056 1496 aa21.92■■□□□ 1.1
MATR3-234ENST00000505016 SYNJ1O43426 1573 aa21.91■■□□□ 1.1
MATR3-234ENST00000505016 ABCA5Q8WWZ7 1642 aa21.9■■□□□ 1.1
MATR3-234ENST00000505016 DMRT2Q9Y5R5 561 aa21.86■■□□□ 1.09
MATR3-234ENST00000505016 WRNQ14191 1432 aaPredicted RBP eCLIP21.83■■□□□ 1.096e-9■■■■■ 30.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms