Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 RABGGTB-205ENST00000462042 569 ntTSL 35.54□□□□□ -1.524e-37■■■□□ 18.2
DKC1O60832 RABGGTB-207ENST00000470201 848 ntTSL 34.86□□□□□ -1.634e-37■■■□□ 18.2
DKC1O60832 RABGGTB-213ENST00000496055 3863 ntTSL 24.72□□□□□ -1.654e-37■■■□□ 18.2
DKC1O60832 RABGGTB-210ENST00000485459 788 ntTSL 53.93□□□□□ -1.784e-37■■■□□ 18.2
DKC1O60832 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.45□□□□□ -1.864e-37■■■□□ 18.2
DKC1O60832 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.79■■□□□ 1.885e-8■■■□□ 18.2
DKC1O60832 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.675e-8■■■□□ 18.2
DKC1O60832 DAZAP1-204ENST00000586579 619 ntTSL 325.42■■□□□ 1.665e-8■■■□□ 18.2
DKC1O60832 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.525e-8■■■□□ 18.2
DKC1O60832 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.315e-8■■■□□ 18.2
DKC1O60832 DAZAP1-210ENST00000592453 1021 ntTSL 516.62■□□□□ 0.255e-8■■■□□ 18.2
DKC1O60832 DAZAP1-209ENST00000590419 508 ntTSL 316.27■□□□□ 0.25e-8■■■□□ 18.2
DKC1O60832 IKBKG-203ENST00000440286 960 ntTSL 525.02■■□□□ 1.63e-7■■■□□ 18.1
DKC1O60832 IKBKG-202ENST00000422680 841 ntTSL 214.65□□□□□ -0.063e-7■■■□□ 18.1
DKC1O60832 PUM1-221ENST00000530669 582 ntTSL 311.72□□□□□ -0.533e-23■■■□□ 18.1
DKC1O60832 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC13.86□□□□□ -0.193e-7■■■□□ 18
DKC1O60832 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC9.69□□□□□ -0.863e-7■■■□□ 18
DKC1O60832 ELL-204ENST00000596915 623 ntTSL 317.9■□□□□ 0.469e-17■■■□□ 18
DKC1O60832 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.99■■□□□ 1.112e-10■■■□□ 18
DKC1O60832 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.39■□□□□ 0.532e-10■■■□□ 18
DKC1O60832 NR2F2-AS1-202ENST00000557863 515 ntTSL 317.99■□□□□ 0.475e-8■■■□□ 18
DKC1O60832 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.42e-10■■■□□ 18
DKC1O60832 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.18■□□□□ 0.342e-10■■■□□ 18
DKC1O60832 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.192e-18■■■□□ 18
DKC1O60832 DNM2-218ENST00000591701 863 ntTSL 315.32■□□□□ 0.042e-10■■■□□ 18
DKC1O60832 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.12e-10■■■□□ 18
DKC1O60832 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC13.34□□□□□ -0.275e-8■■■□□ 18
DKC1O60832 DNM2-210ENST00000587830 868 ntTSL 512.57□□□□□ -0.42e-10■■■□□ 18
DKC1O60832 SERPINA3-202ENST00000393080 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.42e-18■■■□□ 18
DKC1O60832 SERPINA3-208ENST00000556968 1289 ntTSL 1 (best)12.42□□□□□ -0.422e-18■■■□□ 18
DKC1O60832 SERPINA3-201ENST00000393078 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.422e-18■■■□□ 18
DKC1O60832 SERPINA3-204ENST00000482740 2420 ntTSL 1 (best) BASIC11.92□□□□□ -0.52e-18■■■□□ 18
DKC1O60832 NR2F2-AS1-201ENST00000502125 1930 ntTSL 2 BASIC11.48□□□□□ -0.575e-8■■■□□ 18
DKC1O60832 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC10.56□□□□□ -0.725e-8■■■□□ 18
DKC1O60832 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.882e-18■■■□□ 18
DKC1O60832 DNM2-209ENST00000587485 530 ntTSL 48.83□□□□□ -12e-10■■■□□ 18
DKC1O60832 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.76□□□□□ -1.175e-8■■■□□ 18
DKC1O60832 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.53□□□□□ -1.845e-8■■■□□ 18
DKC1O60832 CARHSP1-215ENST00000570125 681 ntTSL 431.8■■■□□ 2.684e-7■■■□□ 18
DKC1O60832 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.844e-7■■■□□ 18
DKC1O60832 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.774e-7■■■□□ 18
DKC1O60832 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.642e-6■■■□□ 18
DKC1O60832 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.334e-7■■■□□ 18
DKC1O60832 CARHSP1-212ENST00000568968 461 ntTSL 216.2■□□□□ 0.184e-7■■■□□ 18
DKC1O60832 CARHSP1-211ENST00000568117 521 ntTSL 315.81■□□□□ 0.124e-7■■■□□ 18
DKC1O60832 CARHSP1-210ENST00000567908 565 ntTSL 215.55■□□□□ 0.084e-7■■■□□ 18
DKC1O60832 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 04e-7■■■□□ 18
DKC1O60832 CARHSP1-207ENST00000565287 556 ntTSL 314.99□□□□□ -0.014e-7■■■□□ 18
DKC1O60832 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.014e-7■■■□□ 18
DKC1O60832 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.064e-7■■■□□ 18
DKC1O60832 RAI1-203ENST00000471135 570 ntTSL 314.67□□□□□ -0.062e-6■■■□□ 18
DKC1O60832 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.164e-7■■■□□ 18
DKC1O60832 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.24e-7■■■□□ 18
DKC1O60832 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.234e-7■■■□□ 18
DKC1O60832 ACTB-205ENST00000432588 568 ntTSL 418.18■□□□□ 0.52e-6■■■□□ 17.9
DKC1O60832 ACTB-206ENST00000443528 569 ntTSL 417.62■□□□□ 0.412e-6■■■□□ 17.9
DKC1O60832 ACTB-202ENST00000414620 561 ntTSL 417.4■□□□□ 0.382e-6■■■□□ 17.9
DKC1O60832 SNORA10-201ENST00000384084 133 ntBASIC8.79□□□□□ -11e-323■■■□□ 17.9
DKC1O60832 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.86■□□□□ 0.771e-323■■■□□ 17.9
DKC1O60832 SNORA17B-202ENST00000626886 136 ntBASIC10.91□□□□□ -0.661e-323■■■□□ 17.9
DKC1O60832 LASP1-204ENST00000435347 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.479e-14■■■□□ 17.9
DKC1O60832 LASP1-203ENST00000433206 4023 ntTSL 2 BASIC11.62□□□□□ -0.559e-14■■■□□ 17.9
DKC1O60832 LASP1-201ENST00000318008 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.559e-14■■■□□ 17.9
DKC1O60832 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.12■□□□□ 0.171e-8■■■□□ 17.9
DKC1O60832 RABGGTB-214ENST00000497648 1319 ntTSL 29.43□□□□□ -0.95e-37■■■□□ 17.9
DKC1O60832 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.844e-7■■■□□ 17.9
DKC1O60832 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.654e-7■■■□□ 17.9
DKC1O60832 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.274e-7■■■□□ 17.9
DKC1O60832 HSPA9-210ENST00000508003 582 ntTSL 212.66□□□□□ -0.383e-26■■■□□ 17.8
DKC1O60832 SNORD63-201ENST00000384262 68 ntBASIC0.91□□□□□ -2.263e-26■■■□□ 17.8
DKC1O60832 BCAR1-222ENST00000569340 714 ntTSL 314.91□□□□□ -0.021e-8■■■□□ 17.8
DKC1O60832 SNORA5A-201ENST00000384111 134 ntBASIC4.12□□□□□ -1.751e-323■■■□□ 17.8
DKC1O60832 CSNK2A2-204ENST00000565188 547 ntTSL 223.07■■□□□ 1.283e-11■■■□□ 17.8
DKC1O60832 CSNK2A2-202ENST00000562367 687 ntTSL 34.68□□□□□ -1.663e-11■■■□□ 17.8
DKC1O60832 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.555e-8■■■□□ 17.8
DKC1O60832 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.345e-8■■■□□ 17.8
DKC1O60832 NOP58-207ENST00000478941 508 ntTSL 36.65□□□□□ -1.341e-323■■■□□ 17.8
DKC1O60832 BUB1-201ENST00000302759 3507 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.731e-7■■■□□ 17.7
DKC1O60832 BUB1-212ENST00000535254 3576 ntTSL 2 BASIC9.87□□□□□ -0.831e-7■■■□□ 17.7
DKC1O60832 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.76□□□□□ -1.171e-7■■■□□ 17.7
DKC1O60832 BUB1-207ENST00000466333 2501 ntTSL 1 (best)6.76□□□□□ -1.331e-7■■■□□ 17.7
DKC1O60832 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.75□□□□□ -0.213e-6■■■□□ 17.7
DKC1O60832 MTSS1-205ENST00000518547 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.423e-6■■■□□ 17.7
DKC1O60832 MTSS1-202ENST00000378017 4458 ntTSL 1 (best) BASIC11.25□□□□□ -0.613e-6■■■□□ 17.7
DKC1O60832 RPS2-211ENST00000531065 1548 ntTSL 530.56■■■□□ 2.481e-323■■■□□ 17.7
DKC1O60832 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.91■■■□□ 2.381e-323■■■□□ 17.7
DKC1O60832 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.59■■■□□ 2.171e-323■■■□□ 17.7
DKC1O60832 RPS2-205ENST00000527109 1030 ntTSL 1 (best)28.59■■■□□ 2.171e-323■■■□□ 17.7
DKC1O60832 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.141e-323■■■□□ 17.7
DKC1O60832 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.41■■■□□ 2.141e-323■■■□□ 17.7
DKC1O60832 RPS2-215ENST00000533872 1114 ntTSL 527.56■■■□□ 21e-323■■■□□ 17.7
DKC1O60832 RPS2-208ENST00000527871 1243 ntTSL 1 (best)27.23■■□□□ 1.951e-323■■■□□ 17.7
DKC1O60832 RPS2-213ENST00000533161 1186 ntTSL 1 (best)26.61■■□□□ 1.851e-323■■■□□ 17.7
DKC1O60832 RPS2-203ENST00000526586 878 ntTSL 210.5□□□□□ -0.731e-323■■■□□ 17.7
DKC1O60832 RPS2-212ENST00000532746 931 ntTSL 39.97□□□□□ -0.811e-323■■■□□ 17.7
DKC1O60832 RPS2-214ENST00000533186 625 ntTSL 39.97□□□□□ -0.811e-323■■■□□ 17.7
DKC1O60832 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC8.98□□□□□ -0.973e-6■■■□□ 17.6
DKC1O60832 AC124312.1-202ENST00000557230 669 ntAPPRIS ALT2 TSL 57.98□□□□□ -1.132e-7■■■□□ 17.6
DKC1O60832 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.252e-7■■■□□ 17.6
DKC1O60832 SNHG14-214ENST00000551361 550 ntTSL 34.03□□□□□ -1.762e-7■■■□□ 17.6
Retrieved 100 of 8,567 protein–RNA pairs in 87.5 ms