RNA–Protein interactions for RNA: ENST00000530669.1

PUM1-221, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-221ENST00000530669 NISCHQ9Y2I1 1504 aa23.82■■□□□ 1.4
PUM1-221ENST00000530669 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
PUM1-221ENST00000530669 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
PUM1-221ENST00000530669 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
PUM1-221ENST00000530669 ZCCHC6Q5VYS8 1495 aaKnown RBP19.99■□□□□ 0.79
PUM1-221ENST00000530669 DCAF1Q9Y4B6 1507 aa19.76■□□□□ 0.75
PUM1-221ENST00000530669 DCAF8L2P0C7V8 631 aa19.58■□□□□ 0.72
PUM1-221ENST00000530669 MYO15BQ96JP2 1530 aa19.54■□□□□ 0.72
PUM1-221ENST00000530669 ABCC9O60706 1549 aa19.51■□□□□ 0.71
PUM1-221ENST00000530669 NACADO15069 1562 aa19.36■□□□□ 0.69
PUM1-221ENST00000530669 SHROOM4Q9ULL8 1493 aa19.31■□□□□ 0.68
PUM1-221ENST00000530669 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
PUM1-221ENST00000530669 SCRIBQ14160 1630 aa18.99■□□□□ 0.63
PUM1-221ENST00000530669 UNC13AQ9UPW8 1703 aa18.74■□□□□ 0.59
PUM1-221ENST00000530669 SUPT5HO00267 1087 aaKnown RBP18.66■□□□□ 0.58
PUM1-221ENST00000530669 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
PUM1-221ENST00000530669 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
PUM1-221ENST00000530669 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.54
PUM1-221ENST00000530669 PABPN1Q86U42 306 aaKnown RBP eCLIP18.41■□□□□ 0.54
PUM1-221ENST00000530669 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
PUM1-221ENST00000530669 MROH2BQ7Z745 1585 aa18.36■□□□□ 0.53
PUM1-221ENST00000530669 SMARCA4P51532 1647 aa18.28■□□□□ 0.52
PUM1-221ENST00000530669 WIZO95785 1651 aa18.2■□□□□ 0.5
PUM1-221ENST00000530669 PEG3Q9GZU2 1588 aa18.11■□□□□ 0.49
PUM1-221ENST00000530669 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
PUM1-221ENST00000530669 TOP2AP11388 1531 aaKnown RBP18.04■□□□□ 0.48
PUM1-221ENST00000530669 SMARCA2P51531 1590 aa18■□□□□ 0.47
PUM1-221ENST00000530669 ATAD2BQ9ULI0 1458 aa17.99■□□□□ 0.47
PUM1-221ENST00000530669 EIF4G1Q04637 1599 aaKnown RBP17.97■□□□□ 0.47
PUM1-221ENST00000530669 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
PUM1-221ENST00000530669 CCDC88BA6NC98 1476 aa17.87■□□□□ 0.45
PUM1-221ENST00000530669 BAZ1BQ9UIG0 1483 aaKnown RBP17.86■□□□□ 0.45
PUM1-221ENST00000530669 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
PUM1-221ENST00000530669 CC2D2AQ9P2K1 1620 aa17.69■□□□□ 0.42
PUM1-221ENST00000530669 TRIM41Q8WV44 630 aa17.61■□□□□ 0.41
PUM1-221ENST00000530669 CFTRP13569 1480 aa17.45■□□□□ 0.38
PUM1-221ENST00000530669 ABCC8Q09428 1581 aa17.42■□□□□ 0.38
PUM1-221ENST00000530669 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
PUM1-221ENST00000530669 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
PUM1-221ENST00000530669 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
PUM1-221ENST00000530669 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
PUM1-221ENST00000530669 SYNJ1O43426 1573 aa17.27■□□□□ 0.35
PUM1-221ENST00000530669 TOP2BQ02880 1626 aa17.25■□□□□ 0.35
PUM1-221ENST00000530669 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
PUM1-221ENST00000530669 EEA1Q15075 1411 aa17.23■□□□□ 0.35
PUM1-221ENST00000530669 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
PUM1-221ENST00000530669 LOC105371045A0A1W2PR82 267 aa17.22■□□□□ 0.35
PUM1-221ENST00000530669 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
PUM1-221ENST00000530669 FAM9AQ8IZU1 332 aaPredicted RBP17.19■□□□□ 0.34
PUM1-221ENST00000530669 CUX1P39880 1505 aa17.16■□□□□ 0.34
PUM1-221ENST00000530669 FANCD2Q9BXW9 1451 aa17.16■□□□□ 0.34
PUM1-221ENST00000530669 SOGA1O94964 1423 aa17.14■□□□□ 0.33
PUM1-221ENST00000530669 NESP48681 1621 aa17.14■□□□□ 0.33
PUM1-221ENST00000530669 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
PUM1-221ENST00000530669 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
PUM1-221ENST00000530669 RUSC2Q8N2Y8 1516 aa17.07■□□□□ 0.32
PUM1-221ENST00000530669 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
PUM1-221ENST00000530669 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
PUM1-221ENST00000530669 TOPBP1Q92547 1522 aa16.99■□□□□ 0.31
PUM1-221ENST00000530669 FGD5Q6ZNL6 1462 aa16.97■□□□□ 0.31
PUM1-221ENST00000530669 KIF27Q86VH2 1401 aa16.96■□□□□ 0.31
PUM1-221ENST00000530669 KIF21AQ7Z4S6 1674 aa16.95■□□□□ 0.3
PUM1-221ENST00000530669 KIF21BO75037 1637 aa16.95■□□□□ 0.3
PUM1-221ENST00000530669 TNIKQ9UKE5 1360 aa16.93■□□□□ 0.3
PUM1-221ENST00000530669 GOLGA3Q08378 1498 aa16.93■□□□□ 0.3
PUM1-221ENST00000530669 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
PUM1-221ENST00000530669 POLA1P09884 1462 aaPredicted RBP16.89■□□□□ 0.29
PUM1-221ENST00000530669 CUX2O14529 1486 aa16.87■□□□□ 0.29
PUM1-221ENST00000530669 ABCA10Q8WWZ4 1543 aa16.87■□□□□ 0.29
PUM1-221ENST00000530669 PRXQ9BXM0 1461 aa16.86■□□□□ 0.29
PUM1-221ENST00000530669 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
PUM1-221ENST00000530669 MRC2Q9UBG0 1479 aa16.85■□□□□ 0.29
PUM1-221ENST00000530669 UBTFP17480 764 aaKnown RBP16.84■□□□□ 0.29
PUM1-221ENST00000530669 ERICH3Q5RHP9 1530 aa16.84■□□□□ 0.29
PUM1-221ENST00000530669 IGF1RP08069 1367 aa16.83■□□□□ 0.28
PUM1-221ENST00000530669 RAD54L2Q9Y4B4 1467 aa16.81■□□□□ 0.28
PUM1-221ENST00000530669 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
PUM1-221ENST00000530669 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
PUM1-221ENST00000530669 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
PUM1-221ENST00000530669 CEP162Q5TB80 1403 aa16.76■□□□□ 0.27
PUM1-221ENST00000530669 WDR62O43379 1518 aa16.75■□□□□ 0.27
PUM1-221ENST00000530669 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
PUM1-221ENST00000530669 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
PUM1-221ENST00000530669 CARMIL1Q5VZK9 1371 aa16.73■□□□□ 0.27
PUM1-221ENST00000530669 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
PUM1-221ENST00000530669 CUL7Q14999 1698 aa16.68■□□□□ 0.26
PUM1-221ENST00000530669 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
PUM1-221ENST00000530669 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
PUM1-221ENST00000530669 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
PUM1-221ENST00000530669 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
PUM1-221ENST00000530669 CLIP1P30622 1438 aa16.64■□□□□ 0.25
PUM1-221ENST00000530669 GRIN2BQ13224 1484 aa16.55■□□□□ 0.24
PUM1-221ENST00000530669 PBRM1Q86U86 1689 aa16.55■□□□□ 0.24
PUM1-221ENST00000530669 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.249e-7■■■■■ 36
PUM1-221ENST00000530669 TRIM26Q12899 539 aaPredicted RBP16.54■□□□□ 0.24
PUM1-221ENST00000530669 FHAD1B1AJZ9 1412 aa16.52■□□□□ 0.23
PUM1-221ENST00000530669 VPS8Q8N3P4 1428 aa16.52■□□□□ 0.23
PUM1-221ENST00000530669 ZNF608Q9ULD9 1512 aaPredicted RBP16.51■□□□□ 0.23
PUM1-221ENST00000530669 CTTNBP2Q8WZ74 1663 aa16.48■□□□□ 0.23
PUM1-221ENST00000530669 PCGF6Q9BYE7 350 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms