RNA–Protein interactions for RNA: ENST00000567554.5

CARHSP1-208, Transcript of calcium regulated heat stable protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CARHSP1, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-208ENST00000567554 NISCHQ9Y2I1 1504 aa31.88■■■□□ 2.69
CARHSP1-208ENST00000567554 CCDC180Q9P1Z9 1646 aa28.3■■■□□ 2.12
CARHSP1-208ENST00000567554 ABCC9O60706 1549 aa28.25■■■□□ 2.11
CARHSP1-208ENST00000567554 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
CARHSP1-208ENST00000567554 RB1CC1Q8TDY2 1594 aa26.86■■□□□ 1.89
CARHSP1-208ENST00000567554 NACADO15069 1562 aa26.72■■□□□ 1.87
CARHSP1-208ENST00000567554 ZCCHC6Q5VYS8 1495 aaKnown RBP26.62■■□□□ 1.85
CARHSP1-208ENST00000567554 DNAJC5BQ9UF47 199 aa26.52■■□□□ 1.84
CARHSP1-208ENST00000567554 MYO15BQ96JP2 1530 aa26.49■■□□□ 1.83
CARHSP1-208ENST00000567554 DCAF1Q9Y4B6 1507 aa26.48■■□□□ 1.83
CARHSP1-208ENST00000567554 PABPN1Q86U42 306 aaKnown RBP eCLIP26.43■■□□□ 1.82
CARHSP1-208ENST00000567554 UNC13AQ9UPW8 1703 aa26.31■■□□□ 1.8
CARHSP1-208ENST00000567554 BICRAQ9NZM4 1560 aa26.14■■□□□ 1.78
CARHSP1-208ENST00000567554 SCRIBQ14160 1630 aa25.87■■□□□ 1.73
CARHSP1-208ENST00000567554 SHROOM4Q9ULL8 1493 aa25.63■■□□□ 1.69
CARHSP1-208ENST00000567554 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
CARHSP1-208ENST00000567554 EIF4G1Q04637 1599 aaKnown RBP25.44■■□□□ 1.66
CARHSP1-208ENST00000567554 CECR2Q9BXF3 1484 aa25.39■■□□□ 1.65
CARHSP1-208ENST00000567554 BAZ1AQ9NRL2 1556 aaPredicted RBP24.73■■□□□ 1.55
CARHSP1-208ENST00000567554 NCAPD3P42695 1498 aa24.73■■□□□ 1.55
CARHSP1-208ENST00000567554 ATAD2BQ9ULI0 1458 aa24.7■■□□□ 1.54
CARHSP1-208ENST00000567554 SMARCA4P51532 1647 aa24.68■■□□□ 1.54
CARHSP1-208ENST00000567554 DNAJC5Q9H3Z4 198 aa24.62■■□□□ 1.53
CARHSP1-208ENST00000567554 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
CARHSP1-208ENST00000567554 MROH2BQ7Z745 1585 aa24.53■■□□□ 1.52
CARHSP1-208ENST00000567554 PEG3Q9GZU2 1588 aa24.47■■□□□ 1.51
CARHSP1-208ENST00000567554 HMGXB3Q12766 1538 aa24.47■■□□□ 1.51
CARHSP1-208ENST00000567554 BAZ1BQ9UIG0 1483 aaKnown RBP24.43■■□□□ 1.5
CARHSP1-208ENST00000567554 CUX2O14529 1486 aa24.39■■□□□ 1.5
CARHSP1-208ENST00000567554 RSF1Q96T23 1441 aaPredicted RBP24.37■■□□□ 1.49
CARHSP1-208ENST00000567554 NESP48681 1621 aa24.35■■□□□ 1.49
CARHSP1-208ENST00000567554 ERCC6Q03468 1493 aa24.34■■□□□ 1.49
CARHSP1-208ENST00000567554 WIZO95785 1651 aa24.3■■□□□ 1.48
CARHSP1-208ENST00000567554 TOP2AP11388 1531 aaKnown RBP24.1■■□□□ 1.45
CARHSP1-208ENST00000567554 LAMC3Q9Y6N6 1575 aa24.08■■□□□ 1.44
CARHSP1-208ENST00000567554 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
CARHSP1-208ENST00000567554 PDS5BQ9NTI5 1447 aa23.98■■□□□ 1.43
CARHSP1-208ENST00000567554 KIF21AQ7Z4S6 1674 aa23.95■■□□□ 1.43
CARHSP1-208ENST00000567554 SUPT5HO00267 1087 aaKnown RBP23.93■■□□□ 1.42
CARHSP1-208ENST00000567554 THOC2Q8NI27 1593 aaKnown RBP23.93■■□□□ 1.42
CARHSP1-208ENST00000567554 CCDC88BA6NC98 1476 aa23.77■■□□□ 1.4
CARHSP1-208ENST00000567554 CFTRP13569 1480 aa23.75■■□□□ 1.39
CARHSP1-208ENST00000567554 MRC2Q9UBG0 1479 aa23.74■■□□□ 1.39
CARHSP1-208ENST00000567554 FANCD2Q9BXW9 1451 aa23.71■■□□□ 1.39
CARHSP1-208ENST00000567554 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
CARHSP1-208ENST00000567554 WDR62O43379 1518 aa23.64■■□□□ 1.38
CARHSP1-208ENST00000567554 PRDM2Q13029 1718 aa23.59■■□□□ 1.37
CARHSP1-208ENST00000567554 URB2Q14146 1524 aaKnown RBP23.53■■□□□ 1.36
CARHSP1-208ENST00000567554 TRIM41Q8WV44 630 aa23.45■■□□□ 1.34
CARHSP1-208ENST00000567554 TOPBP1Q92547 1522 aa23.28■■□□□ 1.32
CARHSP1-208ENST00000567554 OSCARQ8IYS5 282 aa23.24■■□□□ 1.31
CARHSP1-208ENST00000567554 ZNF608Q9ULD9 1512 aaPredicted RBP23.23■■□□□ 1.31
CARHSP1-208ENST00000567554 IFT140Q96RY7 1462 aa23.21■■□□□ 1.31
CARHSP1-208ENST00000567554 ABCC8Q09428 1581 aa23.2■■□□□ 1.3
CARHSP1-208ENST00000567554 DNMBPQ6XZF7 1577 aa23.17■■□□□ 1.3
CARHSP1-208ENST00000567554 AQRO60306 1485 aaKnown RBP eCLIP23.07■■□□□ 1.287e-8■■■■■ 41.3
CARHSP1-208ENST00000567554 POLA1P09884 1462 aaPredicted RBP23.06■■□□□ 1.28
CARHSP1-208ENST00000567554 TARBP1Q13395 1621 aaKnown RBP23.05■■□□□ 1.28
CARHSP1-208ENST00000567554 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
CARHSP1-208ENST00000567554 SOGA1O94964 1423 aa23.01■■□□□ 1.27
CARHSP1-208ENST00000567554 EIF4G3O43432 1585 aaKnown RBP23.01■■□□□ 1.27
CARHSP1-208ENST00000567554 WRNQ14191 1432 aaPredicted RBP eCLIP23■■□□□ 1.27
CARHSP1-208ENST00000567554 CUX1P39880 1505 aa23■■□□□ 1.27
CARHSP1-208ENST00000567554 TDRD9Q8NDG6 1382 aaKnown RBP22.98■■□□□ 1.27
CARHSP1-208ENST00000567554 BIVM-ERCC5R4GMW8 1640 aa22.97■■□□□ 1.27
CARHSP1-208ENST00000567554 TOP2BQ02880 1626 aa22.95■■□□□ 1.26
CARHSP1-208ENST00000567554 FGD5Q6ZNL6 1462 aa22.95■■□□□ 1.26
CARHSP1-208ENST00000567554 FBLN2P98095 1184 aa22.93■■□□□ 1.26
CARHSP1-208ENST00000567554 SYNJ1O43426 1573 aa22.9■■□□□ 1.26
CARHSP1-208ENST00000567554 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
CARHSP1-208ENST00000567554 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
CARHSP1-208ENST00000567554 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
CARHSP1-208ENST00000567554 CHD1O14646 1710 aa22.84■■□□□ 1.25
CARHSP1-208ENST00000567554 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
CARHSP1-208ENST00000567554 WDR97A6NE52 1622 aa22.77■■□□□ 1.24
CARHSP1-208ENST00000567554 SNAPC4Q5SXM2 1469 aa22.77■■□□□ 1.24
CARHSP1-208ENST00000567554 CHMP7Q8WUX9 453 aaPredicted RBP22.76■■□□□ 1.23
CARHSP1-208ENST00000567554 CYB5RLQ6IPT4 315 aa22.73■■□□□ 1.23
CARHSP1-208ENST00000567554 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
CARHSP1-208ENST00000567554 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
CARHSP1-208ENST00000567554 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
CARHSP1-208ENST00000567554 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
CARHSP1-208ENST00000567554 SYNJ2O15056 1496 aa22.61■■□□□ 1.21
CARHSP1-208ENST00000567554 PBRM1Q86U86 1689 aa22.61■■□□□ 1.21
CARHSP1-208ENST00000567554 ABCA5Q8WWZ7 1642 aa22.6■■□□□ 1.21
CARHSP1-208ENST00000567554 ARAP1Q96P48 1450 aa22.57■■□□□ 1.2
CARHSP1-208ENST00000567554 CLASP1Q7Z460 1538 aa22.56■■□□□ 1.2
CARHSP1-208ENST00000567554 CHIC1Q5VXU3 224 aa22.55■■□□□ 1.2
CARHSP1-208ENST00000567554 TRHP20396 242 aaPredicted RBP22.53■■□□□ 1.2
CARHSP1-208ENST00000567554 KIF27Q86VH2 1401 aa22.52■■□□□ 1.2
CARHSP1-208ENST00000567554 ERICH3Q5RHP9 1530 aa22.48■■□□□ 1.19
CARHSP1-208ENST00000567554 GRIN2AQ12879 1464 aa22.42■■□□□ 1.18
CARHSP1-208ENST00000567554 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
CARHSP1-208ENST00000567554 ADAMTS12P58397 1594 aa22.39■■□□□ 1.18
CARHSP1-208ENST00000567554 CUL7Q14999 1698 aa22.37■■□□□ 1.17
CARHSP1-208ENST00000567554 EEA1Q15075 1411 aa22.37■■□□□ 1.17
CARHSP1-208ENST00000567554 CEP170Q5SW79 1584 aa22.35■■□□□ 1.17
CARHSP1-208ENST00000567554 NUP160Q12769 1436 aa22.35■■□□□ 1.17
CARHSP1-208ENST00000567554 IGF1RP08069 1367 aa22.34■■□□□ 1.17
CARHSP1-208ENST00000567554 ERCC6L2Q5T890 1561 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms