RNA–Protein interactions for RNA: ENST00000508003.1

HSPA9-210, Transcript of heat shock protein family A (Hsp70) member 9, humanhuman

TSL 2

Gene HSPA9, Length 582 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA9-210ENST00000508003 AEBP2Q6ZN18 517 aaPredicted RBP31.64■■■□□ 2.66
HSPA9-210ENST00000508003 CHIC1Q5VXU3 224 aa29.96■■■□□ 2.39
HSPA9-210ENST00000508003 NISCHQ9Y2I1 1504 aa27.38■■□□□ 1.97
HSPA9-210ENST00000508003 SENP3Q9H4L4 574 aaPredicted RBP26.81■■□□□ 1.88
HSPA9-210ENST00000508003 PHF23Q9BUL5 403 aaPredicted RBP26.55■■□□□ 1.84
HSPA9-210ENST00000508003 FOXD1Q16676 465 aa25.1■■□□□ 1.61
HSPA9-210ENST00000508003 CCDC180Q9P1Z9 1646 aa24.46■■□□□ 1.51
HSPA9-210ENST00000508003 ABCC9O60706 1549 aa24.08■■□□□ 1.45
HSPA9-210ENST00000508003 PLPPR3Q6T4P5 718 aa23.88■■□□□ 1.41
HSPA9-210ENST00000508003 PPP6R1Q9UPN7 881 aa23.56■■□□□ 1.36
HSPA9-210ENST00000508003 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
HSPA9-210ENST00000508003 ADRA2BP18089 450 aa23.45■■□□□ 1.34
HSPA9-210ENST00000508003 PIAS4Q8N2W9 510 aaPredicted RBP23.4■■□□□ 1.34
HSPA9-210ENST00000508003 MSH5O43196 834 aa23.34■■□□□ 1.33
HSPA9-210ENST00000508003 RB1CC1Q8TDY2 1594 aa23.13■■□□□ 1.29
HSPA9-210ENST00000508003 DCAF8L2P0C7V8 631 aa23.05■■□□□ 1.28
HSPA9-210ENST00000508003 NACADO15069 1562 aa23.04■■□□□ 1.28
HSPA9-210ENST00000508003 POTEDQ86YR6 584 aa22.87■■□□□ 1.25
HSPA9-210ENST00000508003 MYO15BQ96JP2 1530 aa22.82■■□□□ 1.24
HSPA9-210ENST00000508003 ZCCHC6Q5VYS8 1495 aaKnown RBP22.75■■□□□ 1.23
HSPA9-210ENST00000508003 DCAF1Q9Y4B6 1507 aa22.65■■□□□ 1.22
HSPA9-210ENST00000508003 UNC13AQ9UPW8 1703 aa22.53■■□□□ 1.2
HSPA9-210ENST00000508003 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
HSPA9-210ENST00000508003 BICRAQ9NZM4 1560 aa22.33■■□□□ 1.16
HSPA9-210ENST00000508003 SCRIBQ14160 1630 aa22.29■■□□□ 1.16
HSPA9-210ENST00000508003 DNAJC5Q9H3Z4 198 aa22.19■■□□□ 1.14
HSPA9-210ENST00000508003 SHROOM4Q9ULL8 1493 aa22.17■■□□□ 1.14
HSPA9-210ENST00000508003 EIF4G1Q04637 1599 aaKnown RBP21.8■■□□□ 1.08
HSPA9-210ENST00000508003 CC2D2AQ9P2K1 1620 aa21.77■■□□□ 1.07
HSPA9-210ENST00000508003 CECR2Q9BXF3 1484 aa21.75■■□□□ 1.07
HSPA9-210ENST00000508003 MAPK8IP2Q13387 824 aaPredicted RBP21.57■■□□□ 1.04
HSPA9-210ENST00000508003 DMRT2Q9Y5R5 561 aa21.32■■□□□ 1
HSPA9-210ENST00000508003 SMARCA4P51532 1647 aa21.29■■□□□ 1
HSPA9-210ENST00000508003 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■■□□□ 1
HSPA9-210ENST00000508003 SCAF1Q9H7N4 1312 aaKnown RBP21.25■□□□□ 0.99
HSPA9-210ENST00000508003 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
HSPA9-210ENST00000508003 NCAPD3P42695 1498 aa21.23■□□□□ 0.99
HSPA9-210ENST00000508003 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
HSPA9-210ENST00000508003 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
HSPA9-210ENST00000508003 CUX2O14529 1486 aa21.07■□□□□ 0.96
HSPA9-210ENST00000508003 BAZ1BQ9UIG0 1483 aaKnown RBP21.07■□□□□ 0.96
HSPA9-210ENST00000508003 MROH2BQ7Z745 1585 aa21.07■□□□□ 0.96
HSPA9-210ENST00000508003 PEG3Q9GZU2 1588 aa21.06■□□□□ 0.96
HSPA9-210ENST00000508003 PPP4R3CPQ6ZMV5 832 aa21■□□□□ 0.95
HSPA9-210ENST00000508003 WIZO95785 1651 aa20.86■□□□□ 0.93
HSPA9-210ENST00000508003 ERCC6Q03468 1493 aa20.84■□□□□ 0.93
HSPA9-210ENST00000508003 TRIM41Q8WV44 630 aa20.83■□□□□ 0.93
HSPA9-210ENST00000508003 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
HSPA9-210ENST00000508003 NESP48681 1621 aa20.75■□□□□ 0.91
HSPA9-210ENST00000508003 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
HSPA9-210ENST00000508003 TOP2AP11388 1531 aaKnown RBP20.64■□□□□ 0.9
HSPA9-210ENST00000508003 PDS5BQ9NTI5 1447 aa20.62■□□□□ 0.89
HSPA9-210ENST00000508003 CADPSQ9ULU8 1353 aa20.61■□□□□ 0.89
HSPA9-210ENST00000508003 HOXD11P31277 338 aaPredicted RBP20.54■□□□□ 0.88
HSPA9-210ENST00000508003 CNKSR2Q8WXI2 1034 aa20.54■□□□□ 0.88
HSPA9-210ENST00000508003 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
HSPA9-210ENST00000508003 THOC2Q8NI27 1593 aaKnown RBP20.48■□□□□ 0.87
HSPA9-210ENST00000508003 CFTRP13569 1480 aa20.44■□□□□ 0.86
HSPA9-210ENST00000508003 DCAF8L1A6NGE4 600 aa20.42■□□□□ 0.86
HSPA9-210ENST00000508003 CEP164Q9UPV0 1460 aa20.4■□□□□ 0.86
HSPA9-210ENST00000508003 MRC2Q9UBG0 1479 aa20.39■□□□□ 0.85
HSPA9-210ENST00000508003 CCDC88BA6NC98 1476 aa20.38■□□□□ 0.85
HSPA9-210ENST00000508003 FANCD2Q9BXW9 1451 aa20.38■□□□□ 0.85
HSPA9-210ENST00000508003 RNF216Q9NWF9 866 aaPredicted RBP20.36■□□□□ 0.85
HSPA9-210ENST00000508003 PRDM2Q13029 1718 aa20.33■□□□□ 0.84
HSPA9-210ENST00000508003 WDR62O43379 1518 aa20.31■□□□□ 0.84
HSPA9-210ENST00000508003 SUPT5HO00267 1087 aaKnown RBP20.2■□□□□ 0.82
HSPA9-210ENST00000508003 URB2Q14146 1524 aaKnown RBP20.15■□□□□ 0.82
HSPA9-210ENST00000508003 ABCC8Q09428 1581 aa20.08■□□□□ 0.81
HSPA9-210ENST00000508003 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
HSPA9-210ENST00000508003 CACNB1Q02641 598 aaPredicted RBP20.06■□□□□ 0.8
HSPA9-210ENST00000508003 TOPBP1Q92547 1522 aa20.02■□□□□ 0.8
HSPA9-210ENST00000508003 DNMBPQ6XZF7 1577 aa20.01■□□□□ 0.79
HSPA9-210ENST00000508003 RNF39Q9H2S5 420 aa20.01■□□□□ 0.79
HSPA9-210ENST00000508003 IFT140Q96RY7 1462 aa19.97■□□□□ 0.79
HSPA9-210ENST00000508003 OSCARQ8IYS5 282 aa19.96■□□□□ 0.79
HSPA9-210ENST00000508003 NPM3O75607 178 aaKnown RBP19.93■□□□□ 0.78
HSPA9-210ENST00000508003 RIMBP3CA6NJZ7 1639 aa19.87■□□□□ 0.77
HSPA9-210ENST00000508003 RIMBP3BA6NNM3 1639 aa19.87■□□□□ 0.77
HSPA9-210ENST00000508003 RIMBP3Q9UFD9 1639 aa19.87■□□□□ 0.77
HSPA9-210ENST00000508003 POLA1P09884 1462 aaPredicted RBP19.84■□□□□ 0.77
HSPA9-210ENST00000508003 ZNF608Q9ULD9 1512 aaPredicted RBP19.83■□□□□ 0.77
HSPA9-210ENST00000508003 TARBP1Q13395 1621 aaKnown RBP19.8■□□□□ 0.76
HSPA9-210ENST00000508003 EIF4G3O43432 1585 aaKnown RBP19.79■□□□□ 0.76
HSPA9-210ENST00000508003 SOGA1O94964 1423 aa19.79■□□□□ 0.76
HSPA9-210ENST00000508003 CUX1P39880 1505 aa19.79■□□□□ 0.76
HSPA9-210ENST00000508003 FGD5Q6ZNL6 1462 aa19.78■□□□□ 0.76
HSPA9-210ENST00000508003 RAD54L2Q9Y4B4 1467 aa19.74■□□□□ 0.75
HSPA9-210ENST00000508003 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.756e-10■□□□□ 9.6
HSPA9-210ENST00000508003 WDR97A6NE52 1622 aa19.7■□□□□ 0.74
HSPA9-210ENST00000508003 ARHGEF11O15085 1522 aa19.68■□□□□ 0.74
HSPA9-210ENST00000508003 TDRD9Q8NDG6 1382 aaKnown RBP19.68■□□□□ 0.74
HSPA9-210ENST00000508003 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
HSPA9-210ENST00000508003 C1QBPQ07021 282 aaKnown RBP19.64■□□□□ 0.73
HSPA9-210ENST00000508003 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.73
HSPA9-210ENST00000508003 FBLN2P98095 1184 aa19.62■□□□□ 0.73
HSPA9-210ENST00000508003 KCNA4P22459 653 aa19.61■□□□□ 0.73
HSPA9-210ENST00000508003 TOP2BQ02880 1626 aa19.61■□□□□ 0.73
HSPA9-210ENST00000508003 BIVM-ERCC5R4GMW8 1640 aa19.6■□□□□ 0.73
HSPA9-210ENST00000508003 CYB5RLQ6IPT4 315 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms