RNA–Protein interactions for RNA: ENST00000318008.10

LASP1-201, Transcript of LIM and SH3 protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LASP1, Length 4,109 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LASP1-201ENST00000318008 NISCHQ9Y2I1 1504 aa20.09■□□□□ 0.81
LASP1-201ENST00000318008 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
LASP1-201ENST00000318008 SHROOM4Q9ULL8 1493 aa18.16■□□□□ 0.5
LASP1-201ENST00000318008 SUPT5HO00267 1087 aaKnown RBP18.01■□□□□ 0.47
LASP1-201ENST00000318008 ABCC9O60706 1549 aa17.33■□□□□ 0.36
LASP1-201ENST00000318008 EHMT2Q96KQ7 1210 aa17.21■□□□□ 0.35
LASP1-201ENST00000318008 PCGF6Q9BYE7 350 aa16.94■□□□□ 0.3
LASP1-201ENST00000318008 PABPN1Q86U42 306 aaKnown RBP eCLIP16.89■□□□□ 0.29
LASP1-201ENST00000318008 FAM9AQ8IZU1 332 aaPredicted RBP16.85■□□□□ 0.29
LASP1-201ENST00000318008 CCDC180Q9P1Z9 1646 aa16.83■□□□□ 0.28
LASP1-201ENST00000318008 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
LASP1-201ENST00000318008 CHIC1Q5VXU3 224 aa16.7■□□□□ 0.26
LASP1-201ENST00000318008 ZCCHC6Q5VYS8 1495 aaKnown RBP16.7■□□□□ 0.26
LASP1-201ENST00000318008 LOC105371045A0A1W2PR82 267 aa16.51■□□□□ 0.23
LASP1-201ENST00000318008 TTBK1Q5TCY1 1321 aaPredicted RBP16.49■□□□□ 0.23
LASP1-201ENST00000318008 HRCP23327 699 aa16.46■□□□□ 0.23
LASP1-201ENST00000318008 PELP1Q8IZL8 1130 aaKnown RBP16.44■□□□□ 0.22
LASP1-201ENST00000318008 RANGAP1P46060 587 aaPredicted RBP16.4■□□□□ 0.22
LASP1-201ENST00000318008 SCRIBQ14160 1630 aa16.38■□□□□ 0.21
LASP1-201ENST00000318008 APLP2Q06481 763 aa16.33■□□□□ 0.2
LASP1-201ENST00000318008 TRIM26Q12899 539 aaPredicted RBP16.33■□□□□ 0.2
LASP1-201ENST00000318008 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
LASP1-201ENST00000318008 RB1CC1Q8TDY2 1594 aa16.31■□□□□ 0.2
LASP1-201ENST00000318008 UBTFP17480 764 aaKnown RBP16.31■□□□□ 0.2
LASP1-201ENST00000318008 PPARGC1BQ86YN6 1023 aaKnown RBP16.27■□□□□ 0.19
LASP1-201ENST00000318008 NACADO15069 1562 aa16.24■□□□□ 0.19
LASP1-201ENST00000318008 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
LASP1-201ENST00000318008 ATP1B4Q9UN42 357 aaPredicted RBP16.11■□□□□ 0.17
LASP1-201ENST00000318008 DCAF1Q9Y4B6 1507 aa16.07■□□□□ 0.16
LASP1-201ENST00000318008 MYT1Q01538 1121 aa16.04■□□□□ 0.16
LASP1-201ENST00000318008 RSF1Q96T23 1441 aaPredicted RBP15.93■□□□□ 0.14
LASP1-201ENST00000318008 CENPBP07199 599 aaPredicted RBP15.92■□□□□ 0.14
LASP1-201ENST00000318008 MYO15BQ96JP2 1530 aa15.9■□□□□ 0.14
LASP1-201ENST00000318008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
LASP1-201ENST00000318008 CECR2Q9BXF3 1484 aa15.83■□□□□ 0.12
LASP1-201ENST00000318008 YTHDC1Q96MU7 727 aaKnown RBP15.76■□□□□ 0.11
LASP1-201ENST00000318008 HNRNPUL2Q1KMD3 747 aaKnown RBP15.75■□□□□ 0.11
LASP1-201ENST00000318008 FBLN2P98095 1184 aa15.73■□□□□ 0.11
LASP1-201ENST00000318008 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
LASP1-201ENST00000318008 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
LASP1-201ENST00000318008 BAZ1AQ9NRL2 1556 aaPredicted RBP15.67■□□□□ 0.1
LASP1-201ENST00000318008 ITGAEP38570 1179 aa15.62■□□□□ 0.09
LASP1-201ENST00000318008 MROH2BQ7Z745 1585 aa15.61■□□□□ 0.09
LASP1-201ENST00000318008 DIEXFQ68CQ4 756 aaKnown RBP15.59■□□□□ 0.09
LASP1-201ENST00000318008 P3H3Q8IVL6 736 aa15.47■□□□□ 0.07
LASP1-201ENST00000318008 MYT1LQ9UL68 1186 aa15.47■□□□□ 0.07
LASP1-201ENST00000318008 WRNQ14191 1432 aaPredicted RBP eCLIP15.4■□□□□ 0.06
LASP1-201ENST00000318008 SMARCA2P51531 1590 aa15.38■□□□□ 0.05
LASP1-201ENST00000318008 WIZO95785 1651 aa15.37■□□□□ 0.05
LASP1-201ENST00000318008 CCDC88BA6NC98 1476 aa15.37■□□□□ 0.05
LASP1-201ENST00000318008 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
LASP1-201ENST00000318008 FAM50AQ14320 339 aaKnown RBP15.34■□□□□ 0.05
LASP1-201ENST00000318008 ERCC6Q03468 1493 aa15.33■□□□□ 0.04
LASP1-201ENST00000318008 ZNF316A6NFI3 1004 aaPredicted RBP15.32■□□□□ 0.04
LASP1-201ENST00000318008 ARID3CA6NKF2 412 aa15.32■□□□□ 0.04
LASP1-201ENST00000318008 CHMP7Q8WUX9 453 aaPredicted RBP15.32■□□□□ 0.04
LASP1-201ENST00000318008 GTF3C3Q9Y5Q9 886 aa15.32■□□□□ 0.04
LASP1-201ENST00000318008 ATAD2BQ9ULI0 1458 aa15.31■□□□□ 0.04
LASP1-201ENST00000318008 NEFLP07196 543 aa15.27■□□□□ 0.03
LASP1-201ENST00000318008 ACIN1Q9UKV3 1341 aaKnown RBP15.26■□□□□ 0.03
LASP1-201ENST00000318008 SMARCA4P51532 1647 aa15.24■□□□□ 0.03
LASP1-201ENST00000318008 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
LASP1-201ENST00000318008 ABCC8Q09428 1581 aa15.2■□□□□ 0.02
LASP1-201ENST00000318008 EEA1Q15075 1411 aa15.2■□□□□ 0.02
LASP1-201ENST00000318008 PDS5BQ9NTI5 1447 aa15.2■□□□□ 0.02
LASP1-201ENST00000318008 CADPSQ9ULU8 1353 aa15.19■□□□□ 0.02
LASP1-201ENST00000318008 SOGA1O94964 1423 aa15.19■□□□□ 0.02
LASP1-201ENST00000318008 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
LASP1-201ENST00000318008 CEP162Q5TB80 1403 aa15.16■□□□□ 0.02
LASP1-201ENST00000318008 CDK11AQ9UQ88 783 aaPredicted RBP15.16■□□□□ 0.02
LASP1-201ENST00000318008 NEUROD1Q13562 356 aa15.15■□□□□ 0.02
LASP1-201ENST00000318008 CLIP1P30622 1438 aa15.15■□□□□ 0.02
LASP1-201ENST00000318008 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
LASP1-201ENST00000318008 GOLGA3Q08378 1498 aa15.12■□□□□ 0.01
LASP1-201ENST00000318008 EIF4G1Q04637 1599 aaKnown RBP15.11■□□□□ 0.01
LASP1-201ENST00000318008 TRIM52Q96A61 297 aa15.08■□□□□ 0.01
LASP1-201ENST00000318008 NCAPD3P42695 1498 aa15.07■□□□□ 0
LASP1-201ENST00000318008 ZNF777Q9ULD5 760 aaPredicted RBP15.07■□□□□ 0
LASP1-201ENST00000318008 ERICH6Q7L0X2 663 aa15.07■□□□□ 0
LASP1-201ENST00000318008 TNIKQ9UKE5 1360 aa15.06■□□□□ 0
LASP1-201ENST00000318008 CUX2O14529 1486 aa15.06■□□□□ 0
LASP1-201ENST00000318008 CEP164Q9UPV0 1460 aa15.05■□□□□ -0
LASP1-201ENST00000318008 CNGB1Q14028 1251 aaPredicted RBP15.04■□□□□ -0
LASP1-201ENST00000318008 TDRD9Q8NDG6 1382 aaKnown RBP15.02□□□□□ -0.01
LASP1-201ENST00000318008 BICRAQ9NZM4 1560 aa15.02□□□□□ -0.01
LASP1-201ENST00000318008 POLR3GLQ9BT43 218 aa15.01□□□□□ -0.01
LASP1-201ENST00000318008 CARMIL1Q5VZK9 1371 aa15□□□□□ -0.01
LASP1-201ENST00000318008 MIER1Q8N108 512 aa14.96□□□□□ -0.01
LASP1-201ENST00000318008 FANCD2Q9BXW9 1451 aa14.95□□□□□ -0.02
LASP1-201ENST00000318008 BCANQ96GW7 911 aa14.94□□□□□ -0.02
LASP1-201ENST00000318008 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
LASP1-201ENST00000318008 MTUS2Q5JR59 1369 aa14.92□□□□□ -0.02
LASP1-201ENST00000318008 UNC13AQ9UPW8 1703 aa14.92□□□□□ -0.02
LASP1-201ENST00000318008 ANP32CO43423 234 aa14.9□□□□□ -0.02
LASP1-201ENST00000318008 RUSC2Q8N2Y8 1516 aa14.9□□□□□ -0.02
LASP1-201ENST00000318008 CC2D2AQ9P2K1 1620 aa14.9□□□□□ -0.02
LASP1-201ENST00000318008 KCNH8Q96L42 1107 aa14.89□□□□□ -0.03
LASP1-201ENST00000318008 CHIC2Q9UKJ5 165 aa14.88□□□□□ -0.03
LASP1-201ENST00000318008 PLEKHD1A6NEE1 506 aa14.88□□□□□ -0.03
LASP1-201ENST00000318008 DDX10Q13206 875 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms