RNA–Protein interactions for RNA: ENST00000398409.1

CST3-202, Transcript of cystatin C, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CST3, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CST3-202ENST00000398409 NISCHQ9Y2I1 1504 aa43.89■■■■■ 4.62
CST3-202ENST00000398409 CCDC180Q9P1Z9 1646 aa39.2■■■■□ 3.87
CST3-202ENST00000398409 ABCC9O60706 1549 aa38.58■■■■□ 3.77
CST3-202ENST00000398409 RB1CC1Q8TDY2 1594 aa37.12■■■■□ 3.53
CST3-202ENST00000398409 NACADO15069 1562 aa37.01■■■■□ 3.52
CST3-202ENST00000398409 DCAF8L2P0C7V8 631 aa36.87■■■■□ 3.49
CST3-202ENST00000398409 MYO15BQ96JP2 1530 aa36.74■■■■□ 3.47
CST3-202ENST00000398409 ZCCHC6Q5VYS8 1495 aaKnown RBP36.45■■■■□ 3.43
CST3-202ENST00000398409 DCAF1Q9Y4B6 1507 aa36.4■■■■□ 3.42
CST3-202ENST00000398409 UNC13AQ9UPW8 1703 aa36.03■■■■□ 3.36
CST3-202ENST00000398409 PABPN1Q86U42 306 aaKnown RBP eCLIP36.02■■■■□ 3.36
CST3-202ENST00000398409 BICRAQ9NZM4 1560 aa35.82■■■■□ 3.32
CST3-202ENST00000398409 SHROOM4Q9ULL8 1493 aa35.71■■■■□ 3.31
CST3-202ENST00000398409 DNAJC5BQ9UF47 199 aa35.68■■■■□ 3.3
CST3-202ENST00000398409 SCRIBQ14160 1630 aa35.6■■■■□ 3.29
CST3-202ENST00000398409 EIF4G1Q04637 1599 aaKnown RBP34.99■■■■□ 3.19
CST3-202ENST00000398409 CC2D2AQ9P2K1 1620 aa34.91■■■■□ 3.18
CST3-202ENST00000398409 CECR2Q9BXF3 1484 aa34.8■■■■□ 3.16
CST3-202ENST00000398409 NCAPD3P42695 1498 aa34.14■■■■□ 3.06
CST3-202ENST00000398409 BAZ1AQ9NRL2 1556 aaPredicted RBP34.11■■■■□ 3.05
CST3-202ENST00000398409 SMARCA4P51532 1647 aa34.08■■■■□ 3.05
CST3-202ENST00000398409 SMARCA2P51531 1590 aa34.06■■■■□ 3.04
CST3-202ENST00000398409 ATAD2BQ9ULI0 1458 aa34.03■■■■□ 3.04
CST3-202ENST00000398409 HMGXB3Q12766 1538 aa33.9■■■■□ 3.02
CST3-202ENST00000398409 PEG3Q9GZU2 1588 aa33.83■■■■□ 3.01
CST3-202ENST00000398409 BAZ1BQ9UIG0 1483 aaKnown RBP33.76■■■■□ 3
CST3-202ENST00000398409 MROH2BQ7Z745 1585 aa33.72■■■□□ 2.99
CST3-202ENST00000398409 ERCC6Q03468 1493 aa33.42■■■□□ 2.94
CST3-202ENST00000398409 WIZO95785 1651 aa33.32■■■□□ 2.92
CST3-202ENST00000398409 LAMC3Q9Y6N6 1575 aa33.29■■■□□ 2.92
CST3-202ENST00000398409 RSF1Q96T23 1441 aaPredicted RBP33.28■■■□□ 2.92
CST3-202ENST00000398409 NESP48681 1621 aa33.23■■■□□ 2.91
CST3-202ENST00000398409 CUX2O14529 1486 aa33.23■■■□□ 2.91
CST3-202ENST00000398409 PDS5BQ9NTI5 1447 aa33.16■■■□□ 2.9
CST3-202ENST00000398409 CADPSQ9ULU8 1353 aa33.14■■■□□ 2.9
CST3-202ENST00000398409 TOP2AP11388 1531 aaKnown RBP33.05■■■□□ 2.88
CST3-202ENST00000398409 THOC2Q8NI27 1593 aaKnown RBP32.83■■■□□ 2.85
CST3-202ENST00000398409 CFTRP13569 1480 aa32.83■■■□□ 2.85
CST3-202ENST00000398409 KIF21AQ7Z4S6 1674 aa32.82■■■□□ 2.84
CST3-202ENST00000398409 MRC2Q9UBG0 1479 aa32.73■■■□□ 2.83
CST3-202ENST00000398409 CEP164Q9UPV0 1460 aa32.71■■■□□ 2.83
CST3-202ENST00000398409 FANCD2Q9BXW9 1451 aa32.69■■■□□ 2.82
CST3-202ENST00000398409 CCDC88BA6NC98 1476 aa32.64■■■□□ 2.82
CST3-202ENST00000398409 DNAJC5Q9H3Z4 198 aa32.62■■■□□ 2.81
CST3-202ENST00000398409 WDR62O43379 1518 aa32.59■■■□□ 2.81
CST3-202ENST00000398409 PRDM2Q13029 1718 aa32.47■■■□□ 2.79
CST3-202ENST00000398409 URB2Q14146 1524 aaKnown RBP32.31■■■□□ 2.76
CST3-202ENST00000398409 ABCC8Q09428 1581 aa32.28■■■□□ 2.76
CST3-202ENST00000398409 SUPT5HO00267 1087 aaKnown RBP32.19■■■□□ 2.74
CST3-202ENST00000398409 TOPBP1Q92547 1522 aa32.1■■■□□ 2.73
CST3-202ENST00000398409 IFT140Q96RY7 1462 aa32.08■■■□□ 2.73
CST3-202ENST00000398409 DNMBPQ6XZF7 1577 aa32.06■■■□□ 2.72
CST3-202ENST00000398409 OSCARQ8IYS5 282 aa31.86■■■□□ 2.69
CST3-202ENST00000398409 POLA1P09884 1462 aaPredicted RBP31.79■■■□□ 2.68
CST3-202ENST00000398409 ZNF608Q9ULD9 1512 aaPredicted RBP31.79■■■□□ 2.68
CST3-202ENST00000398409 SOGA1O94964 1423 aa31.75■■■□□ 2.67
CST3-202ENST00000398409 TARBP1Q13395 1621 aaKnown RBP31.73■■■□□ 2.67
CST3-202ENST00000398409 CUX1P39880 1505 aa31.67■■■□□ 2.66
CST3-202ENST00000398409 EIF4G3O43432 1585 aaKnown RBP31.67■■■□□ 2.66
CST3-202ENST00000398409 FGD5Q6ZNL6 1462 aa31.66■■■□□ 2.66
CST3-202ENST00000398409 WDR97A6NE52 1622 aa31.65■■■□□ 2.66
CST3-202ENST00000398409 AQRO60306 1485 aaKnown RBP eCLIP31.63■■■□□ 2.658e-11■■■■□ 26.1
CST3-202ENST00000398409 RAD54L2Q9Y4B4 1467 aa31.6■■■□□ 2.65
CST3-202ENST00000398409 TDRD9Q8NDG6 1382 aaKnown RBP31.54■■■□□ 2.64
CST3-202ENST00000398409 WRNQ14191 1432 aaPredicted RBP eCLIP31.45■■■□□ 2.63
CST3-202ENST00000398409 GRIN2BQ13224 1484 aa31.42■■■□□ 2.62
CST3-202ENST00000398409 FBLN2P98095 1184 aa31.42■■■□□ 2.62
CST3-202ENST00000398409 ABCA10Q8WWZ4 1543 aa31.4■■■□□ 2.62
CST3-202ENST00000398409 MAGI1Q96QZ7 1491 aaPredicted RBP31.4■■■□□ 2.62
CST3-202ENST00000398409 TOP2BQ02880 1626 aa31.38■■■□□ 2.61
CST3-202ENST00000398409 GAPVD1Q14C86 1478 aa31.35■■■□□ 2.61
CST3-202ENST00000398409 CHMP7Q8WUX9 453 aaPredicted RBP31.35■■■□□ 2.61
CST3-202ENST00000398409 BIVM-ERCC5R4GMW8 1640 aa31.34■■■□□ 2.61
CST3-202ENST00000398409 SNAPC4Q5SXM2 1469 aa31.33■■■□□ 2.61
CST3-202ENST00000398409 CHD1O14646 1710 aa31.31■■■□□ 2.6
CST3-202ENST00000398409 TRIM41Q8WV44 630 aa31.3■■■□□ 2.6
CST3-202ENST00000398409 SYNJ2O15056 1496 aa31.25■■■□□ 2.59
CST3-202ENST00000398409 SYNJ1O43426 1573 aa31.23■■■□□ 2.59
CST3-202ENST00000398409 ABCA5Q8WWZ7 1642 aa31.21■■■□□ 2.59
CST3-202ENST00000398409 PBRM1Q86U86 1689 aa31.19■■■□□ 2.58
CST3-202ENST00000398409 ARHGEF11O15085 1522 aa31.17■■■□□ 2.58
CST3-202ENST00000398409 RIMBP3CA6NJZ7 1639 aa31.16■■■□□ 2.58
CST3-202ENST00000398409 RIMBP3BA6NNM3 1639 aa31.16■■■□□ 2.58
CST3-202ENST00000398409 RIMBP3Q9UFD9 1639 aa31.16■■■□□ 2.58
CST3-202ENST00000398409 ERICH3Q5RHP9 1530 aa31.05■■■□□ 2.56
CST3-202ENST00000398409 FHAD1B1AJZ9 1412 aa31.02■■■□□ 2.56
CST3-202ENST00000398409 CLASP1Q7Z460 1538 aa31.02■■■□□ 2.56
CST3-202ENST00000398409 GRIN2AQ12879 1464 aa30.97■■■□□ 2.55
CST3-202ENST00000398409 CYB5RLQ6IPT4 315 aa30.97■■■□□ 2.55
CST3-202ENST00000398409 ADAMTS12P58397 1594 aa30.95■■■□□ 2.54
CST3-202ENST00000398409 KIF27Q86VH2 1401 aa30.9■■■□□ 2.54
CST3-202ENST00000398409 ARAP1Q96P48 1450 aa30.85■■■□□ 2.53
CST3-202ENST00000398409 NUP160Q12769 1436 aa30.85■■■□□ 2.53
CST3-202ENST00000398409 IGF1RP08069 1367 aa30.74■■■□□ 2.51
CST3-202ENST00000398409 CEP170Q5SW79 1584 aa30.73■■■□□ 2.51
CST3-202ENST00000398409 CUL7Q14999 1698 aa30.68■■■□□ 2.5
CST3-202ENST00000398409 JPH4Q96JJ6 628 aa30.62■■■□□ 2.49
CST3-202ENST00000398409 SHROOM2Q13796 1616 aa30.61■■■□□ 2.49
CST3-202ENST00000398409 CARMIL1Q5VZK9 1371 aa30.59■■■□□ 2.49
CST3-202ENST00000398409 KIAA0586Q9BVV6 1533 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms