Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 AIM11YER093C-A 414 nt3.68□□□□□ -1.82
CAF120P53836 YDR239CYDR239C 2364 nt3.68□□□□□ -1.82
CAF120P53836 SKP2YNL311C 2292 nt3.68□□□□□ -1.82
CAF120P53836 ZDS2YML109W 2829 nt3.67□□□□□ -1.82
CAF120P53836 FAA2YER015W 2235 nt3.67□□□□□ -1.82
CAF120P53836 SEC15YGL233W 2733 nt3.67□□□□□ -1.82
CAF120P53836 RSF2YJR127C 4143 nt3.67□□□□□ -1.82
CAF120P53836 snR191snR191 274 nt3.67□□□□□ -1.82
CAF120P53836 FAS1YKL182W 6156 nt3.67□□□□□ -1.82
CAF120P53836 DBP7YKR024C 2229 nt3.67□□□□□ -1.82
CAF120P53836 DOA4YDR069C 2781 nt3.67□□□□□ -1.82
CAF120P53836 FAT1YBR041W 2010 nt3.66□□□□□ -1.82
CAF120P53836 SWH1YAR042W 3567 nt3.66□□□□□ -1.82
CAF120P53836 MCM7YBR202W 2538 nt3.66□□□□□ -1.82
CAF120P53836 YLR154W-AYLR154W-A 186 nt3.66□□□□□ -1.82
CAF120P53836 MPS1YDL028C 2295 nt3.66□□□□□ -1.82
CAF120P53836 HFM1YGL251C 3564 nt3.66□□□□□ -1.82
CAF120P53836 RRM3YHR031C 2172 nt3.66□□□□□ -1.82
CAF120P53836 GYL1YMR192W 2163 nt3.66□□□□□ -1.82
CAF120P53836 YGL140CYGL140C 3660 nt3.66□□□□□ -1.82
CAF120P53836 REG1YDR028C 3045 nt3.65□□□□□ -1.82
CAF120P53836 CHD1YER164W 4407 nt3.65□□□□□ -1.82
CAF120P53836 PEX1YKL197C 3132 nt3.65□□□□□ -1.82
CAF120P53836 DFG16YOR030W 1860 nt3.65□□□□□ -1.82
CAF120P53836 ECM16YMR128W 3804 nt3.65□□□□□ -1.83
CAF120P53836 FPR1YNL135C 345 nt3.65□□□□□ -1.83
CAF120P53836 NOG1YPL093W 1944 nt3.65□□□□□ -1.83
CAF120P53836 VBA4YDR119W 2307 nt3.65□□□□□ -1.83
CAF120P53836 MYO3YKL129C 3819 nt3.65□□□□□ -1.83
CAF120P53836 QCR7YDR529C 384 nt3.64□□□□□ -1.83
CAF120P53836 YBR206WYBR206W 324 nt3.64□□□□□ -1.83
CAF120P53836 XRS2YDR369C 2565 nt3.64□□□□□ -1.83
CAF120P53836 PLC1YPL268W 2610 nt3.64□□□□□ -1.83
CAF120P53836 CDH1YGL003C 1701 nt3.64□□□□□ -1.83
CAF120P53836 BRO1YPL084W 2535 nt3.64□□□□□ -1.83
CAF120P53836 ZDS1YMR273C 2748 nt3.63□□□□□ -1.83
CAF120P53836 YFR012W-AYFR012W-A 87 nt3.63□□□□□ -1.83
CAF120P53836 SET1YHR119W 3243 nt3.63□□□□□ -1.83
CAF120P53836 MCM10YIL150C 1716 nt3.62□□□□□ -1.83
CAF120P53836 21S_rRNA21S_rRNA 3296 nt3.62□□□□□ -1.83
CAF120P53836 YGL024WYGL024W 336 nt3.62□□□□□ -1.83
CAF120P53836 RSM19YNR037C 276 nt3.62□□□□□ -1.83
CAF120P53836 RPN2YIL075C 2838 nt3.62□□□□□ -1.83
CAF120P53836 YNL034WYNL034W 1839 nt3.61□□□□□ -1.83
CAF120P53836 PRE4YFR050C 801 nt3.61□□□□□ -1.83
CAF120P53836 YGL069CYGL069C 465 nt3.61□□□□□ -1.83
CAF120P53836 STF2YGR008C 255 nt3.61□□□□□ -1.83
CAF120P53836 CMC4YMR194C-B 222 nt3.61□□□□□ -1.83
CAF120P53836 YOR218CYOR218C 420 nt3.61□□□□□ -1.83
CAF120P53836 RPL20BYOR312C 519 nt3.61□□□□□ -1.83
CAF120P53836 RPS23BYPR132W 438 nt3.61□□□□□ -1.83
CAF120P53836 CLN3YAL040C 1743 nt3.61□□□□□ -1.83
CAF120P53836 CFT2YLR115W 2580 nt3.6□□□□□ -1.83
CAF120P53836 MUS81YDR386W 1899 nt3.6□□□□□ -1.83
CAF120P53836 NOP4YPL043W 2058 nt3.6□□□□□ -1.83
CAF120P53836 SNU114YKL173W 3027 nt3.6□□□□□ -1.83
CAF120P53836 HAL9YOL089C 3093 nt3.59□□□□□ -1.83
CAF120P53836 YCR087C-AYCR087C-A 462 nt3.59□□□□□ -1.83
CAF120P53836 YGR051CYGR051C 324 nt3.59□□□□□ -1.83
CAF120P53836 RAM2YKL019W 951 nt3.59□□□□□ -1.83
CAF120P53836 MIT1YEL007W 2001 nt3.59□□□□□ -1.83
CAF120P53836 SET3YKR029C 2256 nt3.59□□□□□ -1.84
CAF120P53836 SPT6YGR116W 4356 nt3.58□□□□□ -1.84
CAF120P53836 YHL006W-AYHL006W-A 354 nt3.58□□□□□ -1.84
CAF120P53836 VTC4YJL012C 2166 nt3.58□□□□□ -1.84
CAF120P53836 MSH2YOL090W 2895 nt3.57□□□□□ -1.84
CAF120P53836 ECM5YMR176W 4236 nt3.57□□□□□ -1.84
CAF120P53836 YAL064W-BYAL064W-B 381 nt3.57□□□□□ -1.84
CAF120P53836 SLX4YLR135W 2247 nt3.57□□□□□ -1.84
CAF120P53836 YMR324CYMR324C 243 nt3.57□□□□□ -1.84
CAF120P53836 YOR072W-BYOR072W-B 162 nt3.57□□□□□ -1.84
CAF120P53836 AKR1YDR264C 2295 nt3.56□□□□□ -1.84
CAF120P53836 SOM1YEL059C-A 225 nt3.56□□□□□ -1.84
CAF120P53836 YBR174CYBR174C 315 nt3.56□□□□□ -1.84
CAF120P53836 YCG1YDR325W 3108 nt3.56□□□□□ -1.84
CAF120P53836 AHC1YOR023C 1701 nt3.56□□□□□ -1.84
CAF120P53836 NUP159YIL115C 4383 nt3.55□□□□□ -1.84
CAF120P53836 tL(UAA)QtL(UAA)Q 85 nt3.55□□□□□ -1.84
CAF120P53836 TIM12YBR091C 330 nt3.55□□□□□ -1.84
CAF120P53836 CDC20YGL116W 1833 nt3.55□□□□□ -1.84
CAF120P53836 SIN3YOL004W 4611 nt3.55□□□□□ -1.84
CAF120P53836 APE2YKL157W 2859 nt3.55□□□□□ -1.84
CAF120P53836 VPS3YDR495C 3036 nt3.54□□□□□ -1.84
CAF120P53836 RDS1YCR106W 2499 nt3.54□□□□□ -1.84
CAF120P53836 SMY1YKL079W 1971 nt3.54□□□□□ -1.84
CAF120P53836 NAB3YPL190C 2409 nt3.54□□□□□ -1.84
CAF120P53836 HEF3YNL014W 3135 nt3.54□□□□□ -1.84
CAF120P53836 MPT5YGL178W 2580 nt3.54□□□□□ -1.84
CAF120P53836 YCL046WYCL046W 324 nt3.54□□□□□ -1.84
CAF120P53836 XRN1YGL173C 4587 nt3.54□□□□□ -1.84
CAF120P53836 MYO5YMR109W 3660 nt3.54□□□□□ -1.84
CAF120P53836 LEU3YLR451W 2661 nt3.54□□□□□ -1.84
CAF120P53836 SKT5YBL061C 2091 nt3.53□□□□□ -1.84
CAF120P53836 ARO1YDR127W 4767 nt3.53□□□□□ -1.84
CAF120P53836 MSD1YPL104W 1977 nt3.53□□□□□ -1.84
CAF120P53836 YDL118WYDL118W 381 nt3.53□□□□□ -1.84
CAF120P53836 MBB1YJL199C 327 nt3.53□□□□□ -1.84
CAF120P53836 GRX8YLR364W 330 nt3.53□□□□□ -1.84
CAF120P53836 CDC31YOR257W 486 nt3.53□□□□□ -1.84
CAF120P53836 URB2YJR041C 3525 nt3.53□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 57.8 ms