RNA–Protein interactions for RNA: YDR239C

YDR239C, Transcript of Protein of unknown function, yeast

Gene YDR239C, Length 2,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR239C	YDR239C	FAP1	P53971	965 aa		8	□□□□□ -1.13
YDR239C	YDR239C	MTC1	P47018	478 aa	Known RBP	7.77	□□□□□ -1.17
YDR239C	YDR239C	PRY3	P47033	881 aa		7.51	□□□□□ -1.21
YDR239C	YDR239C	AAD16	Q02895	342 aa		7.11	□□□□□ -1.27
YDR239C	YDR239C	HAA1	Q12753	694 aa	Known RBP	7.03	□□□□□ -1.28
YDR239C	YDR239C	PRI1	P10363	409 aa		6.97	□□□□□ -1.29
YDR239C	YDR239C	YCK3	P39962	524 aa		6.83	□□□□□ -1.32
YDR239C	YDR239C	ISW2	Q08773	1120 aa		6.71	□□□□□ -1.34
YDR239C	YDR239C	RPG1	P38249	964 aa	Known RBP	6.61	□□□□□ -1.35
YDR239C	YDR239C	TSR3	Q12094	313 aa	Known RBP	6.59	□□□□□ -1.35
YDR239C	YDR239C	DRS1	P32892	752 aa	Known RBP	6.53	□□□□□ -1.36
YDR239C	YDR239C	MRPL32	P25348	183 aa		6.43	□□□□□ -1.38
YDR239C	YDR239C	YGL015C	P33199	130 aa		6.37	□□□□□ -1.39
YDR239C	YDR239C	BUD31	P25337	157 aa	Predicted RBP	6.1	□□□□□ -1.43
YDR239C	YDR239C	RSE1	Q04693	1361 aa	Known RBP	6.06	□□□□□ -1.44
YDR239C	YDR239C	REB1	P21538	810 aa		6	□□□□□ -1.45
YDR239C	YDR239C	DIP2	Q12220	943 aa	Predicted RBP	5.99	□□□□□ -1.45
YDR239C	YDR239C	RPL17A	P05740	184 aa	Known RBP	5.9	□□□□□ -1.46
YDR239C	YDR239C	RPL17B	P46990	184 aa	Known RBP	5.9	□□□□□ -1.46
YDR239C	YDR239C	SIS1	P25294	352 aa	Known RBP	5.86	□□□□□ -1.47
YDR239C	YDR239C	UBP10	P53874	792 aa	Predicted RBP	5.83	□□□□□ -1.48
YDR239C	YDR239C	CDC27	P38042	758 aa		5.8	□□□□□ -1.48
YDR239C	YDR239C	UBP9	P39967	754 aa		5.77	□□□□□ -1.49
YDR239C	YDR239C	MAP2	P38174	421 aa	Known RBP	5.76	□□□□□ -1.49
YDR239C	YDR239C	TIF4632	P39936	914 aa	Known RBP	5.69	□□□□□ -1.5
YDR239C	YDR239C	TGL3	P40308	642 aa		5.6	□□□□□ -1.51
YDR239C	YDR239C	YKR023W	P36119	530 aa	Known RBP	5.59	□□□□□ -1.51
YDR239C	YDR239C	SLX5	P32828	619 aa	Known RBP	5.55	□□□□□ -1.52
YDR239C	YDR239C	SCY1	P53009	804 aa		5.54	□□□□□ -1.52
YDR239C	YDR239C	HO	P09932	586 aa		5.53	□□□□□ -1.52
YDR239C	YDR239C	TFC8	Q12308	588 aa		5.51	□□□□□ -1.53
YDR239C	YDR239C	DCD1	P06773	312 aa		5.49	□□□□□ -1.53
YDR239C	YDR239C	AVT3	P36062	692 aa		5.47	□□□□□ -1.53
YDR239C	YDR239C	SPT21	P35209	758 aa		5.45	□□□□□ -1.54
YDR239C	YDR239C	BCH2	P36122	765 aa		5.29	□□□□□ -1.56
YDR239C	YDR239C	YBL029C-A	Q3E756	94 aa		5.27	□□□□□ -1.57
YDR239C	YDR239C	YJL171C	P46992	396 aa		5.26	□□□□□ -1.57
YDR239C	YDR239C	YOR238W	Q08634	303 aa		5.25	□□□□□ -1.57
YDR239C	YDR239C	SPP1	Q03012	353 aa		5.21	□□□□□ -1.57
YDR239C	YDR239C	MST1	P07236	462 aa		5.2	□□□□□ -1.58
YDR239C	YDR239C	VNX1	P42839	908 aa		5.19	□□□□□ -1.58
YDR239C	YDR239C	WSC3	Q12215	556 aa		5.15	□□□□□ -1.59
YDR239C	YDR239C	RIM101	P33400	625 aa		5.14	□□□□□ -1.59
YDR239C	YDR239C	EPS1	P40557	701 aa		5.14	□□□□□ -1.59
YDR239C	YDR239C	BDF1	P35817	686 aa		5.12	□□□□□ -1.59
YDR239C	YDR239C	AIR2	Q12476	344 aa	Known RBP	5.09	□□□□□ -1.59
YDR239C	YDR239C	GTT3	P39996	337 aa		5.09	□□□□□ -1.59
YDR239C	YDR239C	YAP5	P40574	245 aa		5.09	□□□□□ -1.59
YDR239C	YDR239C	TIF11	P38912	153 aa	Known RBP	5.08	□□□□□ -1.6
YDR239C	YDR239C	BFR2	Q06631	534 aa	Known RBP	5.08	□□□□□ -1.6
YDR239C	YDR239C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
YDR239C	YDR239C	FKH1	P40466	484 aa		5.06	□□□□□ -1.6
YDR239C	YDR239C	BMT6	Q12291	365 aa		5.06	□□□□□ -1.6
YDR239C	YDR239C	YIL055C	P40523	627 aa	Known RBP	5.02	□□□□□ -1.61
YDR239C	YDR239C	PTP3	P40048	928 aa		5.01	□□□□□ -1.61
YDR239C	YDR239C	BBC1	P47068	1157 aa		5.01	□□□□□ -1.61
YDR239C	YDR239C	ULI1	P43604	169 aa		4.98	□□□□□ -1.61
YDR239C	YDR239C	LDB19	Q12502	818 aa		4.98	□□□□□ -1.61
YDR239C	YDR239C	OXP1	P28273	1286 aa		4.91	□□□□□ -1.62
YDR239C	YDR239C	EAP1	P36041	632 aa	Known RBP	4.9	□□□□□ -1.63
YDR239C	YDR239C	IOC2	Q12072	812 aa		4.89	□□□□□ -1.63
YDR239C	YDR239C	RSM7	P47150	247 aa		4.87	□□□□□ -1.63
YDR239C	YDR239C	AI2	P03876	854 aa		4.87	□□□□□ -1.63
YDR239C	YDR239C	NCR1	Q12200	1170 aa		4.86	□□□□□ -1.63
YDR239C	YDR239C	RTG1	P32607	177 aa		4.85	□□□□□ -1.63
YDR239C	YDR239C	MSB4	Q12317	492 aa		4.85	□□□□□ -1.63
YDR239C	YDR239C	TFG1	P41895	735 aa	Predicted RBP	4.84	□□□□□ -1.63
YDR239C	YDR239C	PIB1	Q06651	286 aa		4.82	□□□□□ -1.64
YDR239C	YDR239C	YNL035C	P53962	389 aa	Known RBP	4.78	□□□□□ -1.64
YDR239C	YDR239C	SEC61	P32915	480 aa		4.78	□□□□□ -1.64
YDR239C	YDR239C	BCK2	P33306	851 aa		4.78	□□□□□ -1.64
YDR239C	YDR239C	YAH1	Q12184	172 aa	Known RBP	4.77	□□□□□ -1.65
YDR239C	YDR239C	TRP5	P00931	707 aa	Known RBP	4.77	□□□□□ -1.65
YDR239C	YDR239C	SET4	P42948	560 aa		4.76	□□□□□ -1.65
YDR239C	YDR239C	YOL036W	Q08206	761 aa		4.74	□□□□□ -1.65
YDR239C	YDR239C	CHL1	P22516	861 aa	Predicted RBP	4.7	□□□□□ -1.66
YDR239C	YDR239C	SAP30	P38429	201 aa		4.7	□□□□□ -1.66
YDR239C	YDR239C	MRM1	P25270	412 aa		4.66	□□□□□ -1.66
YDR239C	YDR239C	JIP4	Q03361	876 aa		4.65	□□□□□ -1.67
YDR239C	YDR239C	YDL129W	Q07555	291 aa		4.65	□□□□□ -1.67
YDR239C	YDR239C	PRE3	P38624	215 aa		4.64	□□□□□ -1.67
YDR239C	YDR239C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
YDR239C	YDR239C	DBP1	P24784	617 aa	Known RBP	4.61	□□□□□ -1.67
YDR239C	YDR239C	XDJ1	P39102	459 aa		4.61	□□□□□ -1.67
YDR239C	YDR239C	ABP1	P15891	592 aa	Known RBP	4.6	□□□□□ -1.67
YDR239C	YDR239C	VMA1	P17255	1071 aa	Known RBP	4.59	□□□□□ -1.67
YDR239C	YDR239C	VRP1	P37370	817 aa		4.59	□□□□□ -1.67
YDR239C	YDR239C	SAM3	Q08986	587 aa		4.58	□□□□□ -1.68
YDR239C	YDR239C	YFR006W	P43590	535 aa		4.58	□□□□□ -1.68
YDR239C	YDR239C	PSD2	P53037	1138 aa	Known RBP	4.58	□□□□□ -1.68
YDR239C	YDR239C	DPS1	P04802	557 aa	Known RBP	4.56	□□□□□ -1.68
YDR239C	YDR239C	YLR271W	Q06152	274 aa		4.56	□□□□□ -1.68
YDR239C	YDR239C	HTA1	P04911	132 aa	Known RBP	4.56	□□□□□ -1.68
YDR239C	YDR239C	HTA2	P04912	132 aa		4.56	□□□□□ -1.68
YDR239C	YDR239C	DAN4	P47179	1161 aa		4.56	□□□□□ -1.68
YDR239C	YDR239C	GYP5	Q12344	894 aa		4.55	□□□□□ -1.68
YDR239C	YDR239C	ELP4	Q02884	456 aa	Known RBP	4.55	□□□□□ -1.68
YDR239C	YDR239C	RTG3	P38165	486 aa		4.54	□□□□□ -1.68
YDR239C	YDR239C	PTC4	P38089	393 aa		4.53	□□□□□ -1.68
YDR239C	YDR239C	RGA2	Q06407	1009 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms