RNA–Protein interactions for RNA: YDR119W

VBA4, Transcript of Protein of unknown function, yeastyeast

Gene VBA4, Length 2,307 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA4YDR119W DRS1P32892 752 aaKnown RBP6.9□□□□□ -1.31
VBA4YDR119W TFA1P36100 482 aa6.4□□□□□ -1.38
VBA4YDR119W BFR2Q06631 534 aaKnown RBP6.29□□□□□ -1.4
VBA4YDR119W RQC2Q12532 1038 aaKnown RBP6.2□□□□□ -1.42
VBA4YDR119W MTC1P47018 478 aaKnown RBP6.15□□□□□ -1.43
VBA4YDR119W TAF7Q05021 590 aa5.92□□□□□ -1.46
VBA4YDR119W AVT3P36062 692 aa5.74□□□□□ -1.49
VBA4YDR119W DIP2Q12220 943 aaPredicted RBP5.63□□□□□ -1.51
VBA4YDR119W DMA1P38823 416 aa5.56□□□□□ -1.52
VBA4YDR119W LEO1P38439 464 aa5.46□□□□□ -1.54
VBA4YDR119W PTP3P40048 928 aa5.14□□□□□ -1.59
VBA4YDR119W LEU3P08638 886 aa5.13□□□□□ -1.59
VBA4YDR119W RSE1Q04693 1361 aaKnown RBP5.12□□□□□ -1.59
VBA4YDR119W SAS10Q12136 610 aaPredicted RBP5.02□□□□□ -1.61
VBA4YDR119W DMA2P53924 522 aa5.01□□□□□ -1.61
VBA4YDR119W SSP1P38871 571 aa4.95□□□□□ -1.62
VBA4YDR119W RPN1P38764 993 aaKnown RBP4.94□□□□□ -1.62
VBA4YDR119W RLF2Q12495 606 aa4.93□□□□□ -1.62
VBA4YDR119W ABP1P15891 592 aaKnown RBP4.9□□□□□ -1.62
VBA4YDR119W AIM44Q99299 758 aa4.9□□□□□ -1.62
VBA4YDR119W RPL17AP05740 184 aaKnown RBP4.89□□□□□ -1.63
VBA4YDR119W RPL17BP46990 184 aaKnown RBP4.89□□□□□ -1.63
VBA4YDR119W IFH1P39520 1085 aa4.87□□□□□ -1.63
VBA4YDR119W ISW2Q08773 1120 aa4.84□□□□□ -1.63
VBA4YDR119W RIM101P33400 625 aa4.84□□□□□ -1.64
VBA4YDR119W NAP1P25293 417 aaKnown RBP4.83□□□□□ -1.64
VBA4YDR119W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
VBA4YDR119W CKB1P43639 278 aa4.8□□□□□ -1.64
VBA4YDR119W REB1P21538 810 aa4.76□□□□□ -1.65
VBA4YDR119W RPG1P38249 964 aaKnown RBP4.76□□□□□ -1.65
VBA4YDR119W IOC4Q04213 475 aa4.76□□□□□ -1.65
VBA4YDR119W YAH1Q12184 172 aaKnown RBP4.75□□□□□ -1.65
VBA4YDR119W SPT21P35209 758 aa4.74□□□□□ -1.65
VBA4YDR119W SPB4P25808 606 aaPredicted RBP4.74□□□□□ -1.65
VBA4YDR119W ORC1P54784 914 aaPredicted RBP4.72□□□□□ -1.65
VBA4YDR119W OXP1P28273 1286 aa4.72□□□□□ -1.65
VBA4YDR119W YLR271WQ06152 274 aa4.72□□□□□ -1.65
VBA4YDR119W MGA2P40578 1113 aa4.71□□□□□ -1.66
VBA4YDR119W YML020WQ03722 664 aa4.69□□□□□ -1.66
VBA4YDR119W HGH1P48362 394 aaKnown RBP4.67□□□□□ -1.66
VBA4YDR119W YIL055CP40523 627 aaKnown RBP4.66□□□□□ -1.66
VBA4YDR119W KIN1P13185 1064 aa4.64□□□□□ -1.67
VBA4YDR119W NOP8Q08287 484 aaPredicted RBP4.64□□□□□ -1.67
VBA4YDR119W VPS70P47161 811 aa4.63□□□□□ -1.67
VBA4YDR119W YPR148CQ06523 435 aa4.61□□□□□ -1.67
VBA4YDR119W SET1P38827 1080 aaKnown RBP4.61□□□□□ -1.67
VBA4YDR119W SLX8P40072 274 aa4.61□□□□□ -1.67
VBA4YDR119W CST9Q06032 482 aa4.61□□□□□ -1.67
VBA4YDR119W YNR021WP53723 404 aaKnown RBP4.6□□□□□ -1.67
VBA4YDR119W DSF2P38213 736 aa4.58□□□□□ -1.68
VBA4YDR119W SSA1P10591 642 aaKnown RBP4.57□□□□□ -1.68
VBA4YDR119W RSM7P47150 247 aa4.57□□□□□ -1.68
VBA4YDR119W NOP7P53261 605 aaKnown RBP4.57□□□□□ -1.68
VBA4YDR119W GEF1P37020 779 aa4.57□□□□□ -1.68
VBA4YDR119W PBS2P08018 668 aa4.55□□□□□ -1.68
VBA4YDR119W URN1Q06525 465 aaKnown RBP4.55□□□□□ -1.68
VBA4YDR119W AIM7Q12156 149 aa4.55□□□□□ -1.68
VBA4YDR119W RAM2P29703 316 aa4.54□□□□□ -1.68
VBA4YDR119W GLC3P32775 704 aa4.54□□□□□ -1.68
VBA4YDR119W PRI1P10363 409 aa4.53□□□□□ -1.68
VBA4YDR119W GUA1P38625 525 aaKnown RBP4.53□□□□□ -1.68
VBA4YDR119W SUB2Q07478 446 aaKnown RBP4.51□□□□□ -1.69
VBA4YDR119W TOP1P04786 769 aa4.51□□□□□ -1.69
VBA4YDR119W PSD2P53037 1138 aaKnown RBP4.51□□□□□ -1.69
VBA4YDR119W SNU71P53207 620 aaKnown RBP4.5□□□□□ -1.69
VBA4YDR119W MAM3Q12296 706 aa4.5□□□□□ -1.69
VBA4YDR119W MRX12P47084 519 aa4.49□□□□□ -1.69
VBA4YDR119W HPC2Q01448 625 aa4.49□□□□□ -1.69
VBA4YDR119W SLD2P34252 453 aa4.48□□□□□ -1.69
VBA4YDR119W MET10P39692 1035 aa4.46□□□□□ -1.69
VBA4YDR119W TFB3Q03290 321 aa4.46□□□□□ -1.69
VBA4YDR119W IES2P40154 320 aa4.46□□□□□ -1.7
VBA4YDR119W MAK21Q12176 1025 aaKnown RBP4.46□□□□□ -1.7
VBA4YDR119W DIT2P21595 489 aa4.45□□□□□ -1.7
VBA4YDR119W BRL1P38770 471 aa4.45□□□□□ -1.7
VBA4YDR119W AI2P03876 854 aa4.44□□□□□ -1.7
VBA4YDR119W YRB30P53107 440 aaPredicted RBP4.44□□□□□ -1.7
VBA4YDR119W YKR023WP36119 530 aaKnown RBP4.44□□□□□ -1.7
VBA4YDR119W NUP42P49686 430 aaKnown RBP4.44□□□□□ -1.7
VBA4YDR119W PAM1P37304 830 aaKnown RBP4.43□□□□□ -1.7
VBA4YDR119W ATF2P53296 535 aa4.43□□□□□ -1.7
VBA4YDR119W SSA4P22202 642 aaKnown RBP4.43□□□□□ -1.7
VBA4YDR119W BRN1P38170 754 aa4.41□□□□□ -1.7
VBA4YDR119W RRN6P32786 894 aa4.4□□□□□ -1.7
VBA4YDR119W YTA7P40340 1379 aa4.4□□□□□ -1.71
VBA4YDR119W PKC1P24583 1151 aa4.4□□□□□ -1.71
VBA4YDR119W BIM1P40013 344 aa4.4□□□□□ -1.71
VBA4YDR119W MAK11P20484 414 aaKnown RBP4.39□□□□□ -1.71
VBA4YDR119W HEM3P28789 327 aa4.39□□□□□ -1.71
VBA4YDR119W REF2P42073 533 aaPredicted RBP4.39□□□□□ -1.71
VBA4YDR119W RCR1P38212 213 aa4.39□□□□□ -1.71
VBA4YDR119W YJL007CP47080 104 aa4.38□□□□□ -1.71
VBA4YDR119W RPL34AP87262 121 aaPredicted RBP4.38□□□□□ -1.71
VBA4YDR119W GLN1P32288 370 aaKnown RBP4.38□□□□□ -1.71
VBA4YDR119W CDC3P32457 520 aaKnown RBP4.37□□□□□ -1.71
VBA4YDR119W ATG32P40458 529 aa4.37□□□□□ -1.71
VBA4YDR119W BBC1P47068 1157 aa4.37□□□□□ -1.71
VBA4YDR119W SSA2P10592 639 aaKnown RBP4.36□□□□□ -1.71
VBA4YDR119W SPC42P36094 363 aa4.36□□□□□ -1.71
VBA4YDR119W SSF1P38789 453 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms