RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W FAP1P53971 965 aa8.82□□□□□ -1
SLX4YLR135W PRY3P47033 881 aa8.3□□□□□ -1.08
SLX4YLR135W HAA1Q12753 694 aaKnown RBP7.76□□□□□ -1.17
SLX4YLR135W MTC1P47018 478 aaKnown RBP7.64□□□□□ -1.19
SLX4YLR135W AAD16Q02895 342 aa7.56□□□□□ -1.2
SLX4YLR135W YCK3P39962 524 aa7.48□□□□□ -1.21
SLX4YLR135W PRI1P10363 409 aa7.33□□□□□ -1.24
SLX4YLR135W BUD31P25337 157 aaPredicted RBP6.95□□□□□ -1.3
SLX4YLR135W YGL015CP33199 130 aa6.89□□□□□ -1.31
SLX4YLR135W TSR3Q12094 313 aaKnown RBP6.84□□□□□ -1.31
SLX4YLR135W ISW2Q08773 1120 aa6.82□□□□□ -1.32
SLX4YLR135W MRPL32P25348 183 aa6.73□□□□□ -1.33
SLX4YLR135W RPG1P38249 964 aaKnown RBP6.69□□□□□ -1.34
SLX4YLR135W SIS1P25294 352 aaKnown RBP6.58□□□□□ -1.36
SLX4YLR135W UBP9P39967 754 aa6.31□□□□□ -1.4
SLX4YLR135W UBP10P53874 792 aaPredicted RBP6.09□□□□□ -1.43
SLX4YLR135W TIF4632P39936 914 aaKnown RBP5.96□□□□□ -1.46
SLX4YLR135W MAP2P38174 421 aaKnown RBP5.95□□□□□ -1.46
SLX4YLR135W CDC27P38042 758 aa5.88□□□□□ -1.47
SLX4YLR135W REB1P21538 810 aa5.87□□□□□ -1.47
SLX4YLR135W TGL3P40308 642 aa5.86□□□□□ -1.47
SLX4YLR135W RSE1Q04693 1361 aaKnown RBP5.78□□□□□ -1.48
SLX4YLR135W SLX5P32828 619 aaKnown RBP5.68□□□□□ -1.5
SLX4YLR135W RPL17AP05740 184 aaKnown RBP5.67□□□□□ -1.5
SLX4YLR135W RPL17BP46990 184 aaKnown RBP5.67□□□□□ -1.5
SLX4YLR135W YJL171CP46992 396 aa5.67□□□□□ -1.5
SLX4YLR135W SCY1P53009 804 aa5.59□□□□□ -1.52
SLX4YLR135W DRS1P32892 752 aaKnown RBP5.56□□□□□ -1.52
SLX4YLR135W YBL029C-AQ3E756 94 aa5.52□□□□□ -1.53
SLX4YLR135W YKR023WP36119 530 aaKnown RBP5.47□□□□□ -1.53
SLX4YLR135W SPP1Q03012 353 aa5.44□□□□□ -1.54
SLX4YLR135W DIP2Q12220 943 aaPredicted RBP5.44□□□□□ -1.54
SLX4YLR135W HOP09932 586 aa5.42□□□□□ -1.54
SLX4YLR135W TFC8Q12308 588 aa5.42□□□□□ -1.54
SLX4YLR135W VNX1P42839 908 aa5.41□□□□□ -1.54
SLX4YLR135W AIR2Q12476 344 aaKnown RBP5.41□□□□□ -1.54
SLX4YLR135W DCD1P06773 312 aa5.38□□□□□ -1.55
SLX4YLR135W BMT6Q12291 365 aa5.37□□□□□ -1.55
SLX4YLR135W YOR238WQ08634 303 aa5.35□□□□□ -1.55
SLX4YLR135W FKH1P40466 484 aa5.35□□□□□ -1.55
SLX4YLR135W RGA2Q06407 1009 aa5.34□□□□□ -1.55
SLX4YLR135W MST1P07236 462 aa5.33□□□□□ -1.56
SLX4YLR135W WSC3Q12215 556 aa5.25□□□□□ -1.57
SLX4YLR135W TIF11P38912 153 aaKnown RBP5.25□□□□□ -1.57
SLX4YLR135W SPT21P35209 758 aa5.16□□□□□ -1.58
SLX4YLR135W BCH2P36122 765 aa5.16□□□□□ -1.58
SLX4YLR135W LDB19Q12502 818 aa5.15□□□□□ -1.58
SLX4YLR135W GTT3P39996 337 aa5.12□□□□□ -1.59
SLX4YLR135W NSR1P27476 414 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
SLX4YLR135W YAP5P40574 245 aa5.08□□□□□ -1.6
SLX4YLR135W ULI1P43604 169 aa5.08□□□□□ -1.6
SLX4YLR135W BCK2P33306 851 aa5.06□□□□□ -1.6
SLX4YLR135W RGA1P39083 1007 aa5.04□□□□□ -1.6
SLX4YLR135W IOC2Q12072 812 aa4.99□□□□□ -1.61
SLX4YLR135W EPS1P40557 701 aa4.96□□□□□ -1.62
SLX4YLR135W NCR1Q12200 1170 aa4.96□□□□□ -1.62
SLX4YLR135W BDF1P35817 686 aa4.95□□□□□ -1.62
SLX4YLR135W EAP1P36041 632 aaKnown RBP4.94□□□□□ -1.62
SLX4YLR135W RTG1P32607 177 aa4.93□□□□□ -1.62
SLX4YLR135W TFG1P41895 735 aaPredicted RBP4.92□□□□□ -1.62
SLX4YLR135W AVT3P36062 692 aa4.88□□□□□ -1.63
SLX4YLR135W MSB4Q12317 492 aa4.87□□□□□ -1.63
SLX4YLR135W CHL1P22516 861 aaPredicted RBP4.85□□□□□ -1.63
SLX4YLR135W SEC61P32915 480 aa4.85□□□□□ -1.63
SLX4YLR135W XDJ1P39102 459 aa4.82□□□□□ -1.64
SLX4YLR135W YNL035CP53962 389 aaKnown RBP4.82□□□□□ -1.64
SLX4YLR135W DPS1P04802 557 aaKnown RBP4.81□□□□□ -1.64
SLX4YLR135W SAP30P38429 201 aa4.76□□□□□ -1.65
SLX4YLR135W PRE3P38624 215 aa4.74□□□□□ -1.65
SLX4YLR135W TRP5P00931 707 aaKnown RBP4.74□□□□□ -1.65
SLX4YLR135W BBC1P47068 1157 aa4.73□□□□□ -1.65
SLX4YLR135W VRP1P37370 817 aa4.71□□□□□ -1.66
SLX4YLR135W RIM101P33400 625 aa4.68□□□□□ -1.66
SLX4YLR135W YDL129WQ07555 291 aa4.66□□□□□ -1.66
SLX4YLR135W SET4P42948 560 aa4.66□□□□□ -1.66
SLX4YLR135W YOL036WQ08206 761 aa4.64□□□□□ -1.67
SLX4YLR135W PIB1Q06651 286 aa4.64□□□□□ -1.67
SLX4YLR135W PTP3P40048 928 aa4.61□□□□□ -1.67
SLX4YLR135W JIP4Q03361 876 aa4.59□□□□□ -1.67
SLX4YLR135W YIL055CP40523 627 aaKnown RBP4.58□□□□□ -1.68
SLX4YLR135W SRC1Q03707 834 aa4.54□□□□□ -1.68
SLX4YLR135W ELP4Q02884 456 aaKnown RBP4.52□□□□□ -1.69
SLX4YLR135W AI2P03876 854 aa4.49□□□□□ -1.69
SLX4YLR135W DAN4P47179 1161 aa4.49□□□□□ -1.69
SLX4YLR135W YPL062WQ02781 134 aa4.49□□□□□ -1.69
SLX4YLR135W ABP1P15891 592 aaKnown RBP4.46□□□□□ -1.69
SLX4YLR135W RSM7P47150 247 aa4.42□□□□□ -1.7
SLX4YLR135W OXP1P28273 1286 aa4.4□□□□□ -1.7
SLX4YLR135W PTC4P38089 393 aa4.39□□□□□ -1.71
SLX4YLR135W HTA1P04911 132 aaKnown RBP4.38□□□□□ -1.71
SLX4YLR135W HTA2P04912 132 aa4.38□□□□□ -1.71
SLX4YLR135W GBP2P25555 427 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
SLX4YLR135W SAM3Q08986 587 aa4.38□□□□□ -1.71
SLX4YLR135W TRK1P12685 1235 aa4.36□□□□□ -1.71
SLX4YLR135W VMA1P17255 1071 aaKnown RBP4.34□□□□□ -1.71
SLX4YLR135W SPT23P35210 1082 aa4.33□□□□□ -1.72
SLX4YLR135W YEL023CP39992 682 aa4.32□□□□□ -1.72
SLX4YLR135W YMR1P47147 688 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
SLX4YLR135W GYP5Q12344 894 aa4.31□□□□□ -1.72
SLX4YLR135W ARH1P48360 493 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms