Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 VOA1YGR106C 798 nt2.2□□□□□ -2.06
VTA1Q06263 BIG1YHR101C 1008 nt2.2□□□□□ -2.06
VTA1Q06263 YHR130CYHR130C 336 nt2.2□□□□□ -2.06
VTA1Q06263 TOR2YKL203C 7425 nt2.2□□□□□ -2.06
VTA1Q06263 MCD1YDL003W 1701 nt2.2□□□□□ -2.06
VTA1Q06263 CLN3YAL040C 1743 nt2.2□□□□□ -2.06
VTA1Q06263 USO1YDL058W 5373 nt2.19□□□□□ -2.06
VTA1Q06263 YBR012W-AYBR012W-A 1323 nt2.19□□□□□ -2.06
VTA1Q06263 YOR142W-AYOR142W-A 1323 nt2.19□□□□□ -2.06
VTA1Q06263 YPR158W-AYPR158W-A 1323 nt2.19□□□□□ -2.06
VTA1Q06263 YJL016WYJL016W 1686 nt2.19□□□□□ -2.06
VTA1Q06263 CDC50YCR094W 1176 nt2.19□□□□□ -2.06
VTA1Q06263 YKR051WYKR051W 1257 nt2.19□□□□□ -2.06
VTA1Q06263 SIP18YMR175W 240 nt2.19□□□□□ -2.06
VTA1Q06263 COX7YMR256C 183 nt2.19□□□□□ -2.06
VTA1Q06263 YMR324CYMR324C 243 nt2.19□□□□□ -2.06
VTA1Q06263 YNL010WYNL010W 726 nt2.19□□□□□ -2.06
VTA1Q06263 IRC8YJL051W 2469 nt2.18□□□□□ -2.06
VTA1Q06263 YER188C-AYER188C-A 300 nt2.18□□□□□ -2.06
VTA1Q06263 YMR052C-AYMR052C-A 366 nt2.18□□□□□ -2.06
VTA1Q06263 YBR076C-AYBR076C-A 267 nt2.18□□□□□ -2.06
VTA1Q06263 RPB5YBR154C 648 nt2.18□□□□□ -2.06
VTA1Q06263 SLM6YBR266C 453 nt2.18□□□□□ -2.06
VTA1Q06263 SHE9YDR393W 1371 nt2.18□□□□□ -2.06
VTA1Q06263 VPS52YDR484W 1926 nt2.18□□□□□ -2.06
VTA1Q06263 KOG1YHR186C 4674 nt2.18□□□□□ -2.06
VTA1Q06263 ASM4YDL088C 1587 nt2.18□□□□□ -2.06
VTA1Q06263 RPL27BYDR471W 411 nt2.17□□□□□ -2.06
VTA1Q06263 MSL1YIR009W 336 nt2.17□□□□□ -2.06
VTA1Q06263 YOR248WYOR248W 303 nt2.17□□□□□ -2.06
VTA1Q06263 SWT1YOR166C 1377 nt2.17□□□□□ -2.06
VTA1Q06263 RNH70YGR276C 1662 nt2.17□□□□□ -2.06
VTA1Q06263 AFI1YOR129C 2682 nt2.16□□□□□ -2.06
VTA1Q06263 YPR097WYPR097W 3222 nt2.16□□□□□ -2.06
VTA1Q06263 CDC53YDL132W 2448 nt2.16□□□□□ -2.06
VTA1Q06263 GCN4YEL009C 846 nt2.16□□□□□ -2.06
VTA1Q06263 BI2Q0110 1272 nt2.16□□□□□ -2.06
VTA1Q06263 RPI1YIL119C 1224 nt2.16□□□□□ -2.06
VTA1Q06263 ATP7YKL016C 525 nt2.16□□□□□ -2.06
VTA1Q06263 AIM29YKR074W 468 nt2.16□□□□□ -2.06
VTA1Q06263 YLR171WYLR171W 390 nt2.16□□□□□ -2.06
VTA1Q06263 RTC6YPL183W-A 282 nt2.16□□□□□ -2.06
VTA1Q06263 UTP22YGR090W 3714 nt2.16□□□□□ -2.06
VTA1Q06263 SPO22YIL073C 2928 nt2.16□□□□□ -2.06
VTA1Q06263 TFC3YAL001C 3483 nt2.16□□□□□ -2.06
VTA1Q06263 MET18YIL128W 3099 nt2.16□□□□□ -2.06
VTA1Q06263 IRC10YOL015W 1761 nt2.15□□□□□ -2.06
VTA1Q06263 YDL041WYDL041W 354 nt2.15□□□□□ -2.07
VTA1Q06263 YAL059C-AYAL059C-A 423 nt2.15□□□□□ -2.07
VTA1Q06263 SYM1YLR251W 594 nt2.15□□□□□ -2.07
VTA1Q06263 YML108WYML108W 318 nt2.15□□□□□ -2.07
VTA1Q06263 SPC29YPL124W 762 nt2.15□□□□□ -2.07
VTA1Q06263 SAP185YJL098W 3177 nt2.15□□□□□ -2.07
VTA1Q06263 MUD2YKL074C 1584 nt2.15□□□□□ -2.07
VTA1Q06263 PPN1YDR452W 2025 nt2.14□□□□□ -2.07
VTA1Q06263 YCR001WYCR001W 315 nt2.14□□□□□ -2.07
VTA1Q06263 RPS24AYER074W 408 nt2.14□□□□□ -2.07
VTA1Q06263 LSO2YGR169C-A 279 nt2.14□□□□□ -2.07
VTA1Q06263 YJL052C-AYJL052C-A 120 nt2.14□□□□□ -2.07
VTA1Q06263 YLR269CYLR269C 351 nt2.14□□□□□ -2.07
VTA1Q06263 YOR333CYOR333C 417 nt2.14□□□□□ -2.07
VTA1Q06263 VPS35YJL154C 2835 nt2.13□□□□□ -2.07
VTA1Q06263 NIC96YFR002W 2520 nt2.13□□□□□ -2.07
VTA1Q06263 TOM22YNL131W 459 nt2.13□□□□□ -2.07
VTA1Q06263 YPR039WYPR039W 336 nt2.13□□□□□ -2.07
VTA1Q06263 HMLALPHA2YCL067C 633 nt2.12□□□□□ -2.07
VTA1Q06263 MATALPHA2YCR039C 633 nt2.12□□□□□ -2.07
VTA1Q06263 HOP2YGL033W 657 nt2.12□□□□□ -2.07
VTA1Q06263 TEN1YLR010C 483 nt2.12□□□□□ -2.07
VTA1Q06263 SEC22YLR268W 645 nt2.12□□□□□ -2.07
VTA1Q06263 YOR032W-AYOR032W-A 201 nt2.12□□□□□ -2.07
VTA1Q06263 MSS18YPR134W 807 nt2.12□□□□□ -2.07
VTA1Q06263 YOR192C-AYOR192C-A 1317 nt2.12□□□□□ -2.07
VTA1Q06263 KAP123YER110C 3342 nt2.11□□□□□ -2.07
VTA1Q06263 VPH1YOR270C 2523 nt2.11□□□□□ -2.07
VTA1Q06263 RVS161YCR009C 798 nt2.11□□□□□ -2.07
VTA1Q06263 SNC2YOR327C 348 nt2.11□□□□□ -2.07
VTA1Q06263 NUP120YKL057C 3114 nt2.11□□□□□ -2.07
VTA1Q06263 ALK2YBL009W 2031 nt2.11□□□□□ -2.07
VTA1Q06263 RUD3YOR216C 1455 nt2.11□□□□□ -2.07
VTA1Q06263 SPC72YAL047C 1869 nt2.11□□□□□ -2.07
VTA1Q06263 BRE1YDL074C 2103 nt2.11□□□□□ -2.07
VTA1Q06263 MNE1YOR350C 1992 nt2.1□□□□□ -2.07
VTA1Q06263 TRL1YJL087C 2484 nt2.1□□□□□ -2.07
VTA1Q06263 snR79snR79 84 nt2.1□□□□□ -2.07
VTA1Q06263 YDR286CYDR286C 345 nt2.1□□□□□ -2.07
VTA1Q06263 YHR125WYHR125W 306 nt2.1□□□□□ -2.07
VTA1Q06263 snR41snR41 95 nt2.1□□□□□ -2.07
VTA1Q06263 VMR1YHL035C 4779 nt2.1□□□□□ -2.07
VTA1Q06263 SOK2YMR016C 2358 nt2.09□□□□□ -2.07
VTA1Q06263 KAR3YPR141C 2190 nt2.09□□□□□ -2.07
VTA1Q06263 YER068C-AYER068C-A 432 nt2.09□□□□□ -2.07
VTA1Q06263 YGR025WYGR025W 303 nt2.09□□□□□ -2.07
VTA1Q06263 YHR214W-AYHR214W-A 486 nt2.09□□□□□ -2.07
VTA1Q06263 YJL007CYJL007C 315 nt2.09□□□□□ -2.07
VTA1Q06263 YAR068WYAR068W 486 nt2.09□□□□□ -2.07
VTA1Q06263 RPS22BYLR367W 393 nt2.09□□□□□ -2.07
VTA1Q06263 TSC3YBR058C-A 243 nt2.09□□□□□ -2.07
VTA1Q06263 PUT3YKL015W 2940 nt2.09□□□□□ -2.08
VTA1Q06263 CRM1YGR218W 3255 nt2.09□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 65.5 ms