RNA–Protein interactions for RNA: YPL124W

SPC29, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC29, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC29YPL124W MTC1P47018 478 aaKnown RBP14.6□□□□□ -0.07
SPC29YPL124W DRS1P32892 752 aaKnown RBP13.57□□□□□ -0.24
SPC29YPL124W FAP1P53971 965 aa13.03□□□□□ -0.32
SPC29YPL124W PRI1P10363 409 aa12.32□□□□□ -0.44
SPC29YPL124W PRY3P47033 881 aa12.26□□□□□ -0.45
SPC29YPL124W AAD16Q02895 342 aa12.23□□□□□ -0.45
SPC29YPL124W ISW2Q08773 1120 aa12.06□□□□□ -0.48
SPC29YPL124W RPG1P38249 964 aaKnown RBP11.94□□□□□ -0.5
SPC29YPL124W DIP2Q12220 943 aaPredicted RBP11.93□□□□□ -0.5
SPC29YPL124W YCK3P39962 524 aa11.73□□□□□ -0.53
SPC29YPL124W TSR3Q12094 313 aaKnown RBP11.6□□□□□ -0.55
SPC29YPL124W HAA1Q12753 694 aaKnown RBP11.57□□□□□ -0.56
SPC29YPL124W AVT3P36062 692 aa11.55□□□□□ -0.56
SPC29YPL124W RSE1Q04693 1361 aaKnown RBP11.53□□□□□ -0.56
SPC29YPL124W BFR2Q06631 534 aaKnown RBP11.26□□□□□ -0.61
SPC29YPL124W RPL17AP05740 184 aaKnown RBP11.15□□□□□ -0.62
SPC29YPL124W RPL17BP46990 184 aaKnown RBP11.15□□□□□ -0.62
SPC29YPL124W MRPL32P25348 183 aa11.14□□□□□ -0.63
SPC29YPL124W REB1P21538 810 aa11.06□□□□□ -0.64
SPC29YPL124W SPT21P35209 758 aa10.74□□□□□ -0.69
SPC29YPL124W YGL015CP33199 130 aa10.72□□□□□ -0.69
SPC29YPL124W YKR023WP36119 530 aaKnown RBP10.62□□□□□ -0.71
SPC29YPL124W CDC27P38042 758 aa10.62□□□□□ -0.71
SPC29YPL124W RIM101P33400 625 aa10.39□□□□□ -0.75
SPC29YPL124W TFC8Q12308 588 aa10.39□□□□□ -0.75
SPC29YPL124W HOP09932 586 aa10.34□□□□□ -0.75
SPC29YPL124W UBP10P53874 792 aaPredicted RBP10.33□□□□□ -0.76
SPC29YPL124W DCD1P06773 312 aa10.27□□□□□ -0.77
SPC29YPL124W MAP2P38174 421 aaKnown RBP10.27□□□□□ -0.77
SPC29YPL124W BCH2P36122 765 aa10.04□□□□□ -0.8
SPC29YPL124W SCY1P53009 804 aa10.04□□□□□ -0.8
SPC29YPL124W OXP1P28273 1286 aa10.03□□□□□ -0.8
SPC29YPL124W TFA1P36100 482 aa9.99□□□□□ -0.81
SPC29YPL124W SLX5P32828 619 aaKnown RBP9.93□□□□□ -0.82
SPC29YPL124W TGL3P40308 642 aa9.88□□□□□ -0.83
SPC29YPL124W TIF4632P39936 914 aaKnown RBP9.86□□□□□ -0.83
SPC29YPL124W BUD31P25337 157 aaPredicted RBP9.83□□□□□ -0.84
SPC29YPL124W YIL055CP40523 627 aaKnown RBP9.79□□□□□ -0.84
SPC29YPL124W EPS1P40557 701 aa9.78□□□□□ -0.84
SPC29YPL124W BDF1P35817 686 aa9.75□□□□□ -0.85
SPC29YPL124W PTP3P40048 928 aa9.75□□□□□ -0.85
SPC29YPL124W RSM7P47150 247 aa9.7□□□□□ -0.86
SPC29YPL124W YAH1Q12184 172 aaKnown RBP9.62□□□□□ -0.87
SPC29YPL124W AI2P03876 854 aa9.6□□□□□ -0.87
SPC29YPL124W BBC1P47068 1157 aa9.57□□□□□ -0.88
SPC29YPL124W YLR271WQ06152 274 aa9.55□□□□□ -0.88
SPC29YPL124W MST1P07236 462 aa9.52□□□□□ -0.89
SPC29YPL124W UBP9P39967 754 aa9.52□□□□□ -0.89
SPC29YPL124W NSR1P27476 414 aaKnown RBP RIP-Chip data9.48□□□□□ -0.89not detected
SPC29YPL124W PSD2P53037 1138 aaKnown RBP9.42□□□□□ -0.9
SPC29YPL124W SSP1P38871 571 aa9.41□□□□□ -0.9
SPC29YPL124W YOR238WQ08634 303 aa9.41□□□□□ -0.9
SPC29YPL124W YAP5P40574 245 aa9.34□□□□□ -0.91
SPC29YPL124W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.32□□□□□ -0.92not detected
SPC29YPL124W SIS1P25294 352 aaKnown RBP9.31□□□□□ -0.92
SPC29YPL124W YBL029C-AQ3E756 94 aa9.25□□□□□ -0.93
SPC29YPL124W MRM1P25270 412 aa9.24□□□□□ -0.93
SPC29YPL124W VNX1P42839 908 aa9.21□□□□□ -0.94
SPC29YPL124W MGA2P40578 1113 aa9.19□□□□□ -0.94
SPC29YPL124W CST9Q06032 482 aa9.19□□□□□ -0.94
SPC29YPL124W VPS29P38759 282 aa9.1□□□□□ -0.95
SPC29YPL124W WSC3Q12215 556 aa9.1□□□□□ -0.95
SPC29YPL124W SPP1Q03012 353 aa9.08□□□□□ -0.96
SPC29YPL124W GTT3P39996 337 aa9.07□□□□□ -0.96
SPC29YPL124W PIB1Q06651 286 aa9.07□□□□□ -0.96
SPC29YPL124W RTG3P38165 486 aa9.06□□□□□ -0.96
SPC29YPL124W TIF11P38912 153 aaKnown RBP9.04□□□□□ -0.96
SPC29YPL124W YMR1P47147 688 aaKnown RBP RIP-Chip data9.04□□□□□ -0.96not detected
SPC29YPL124W DBP1P24784 617 aaKnown RBP8.99□□□□□ -0.97
SPC29YPL124W RCR1P38212 213 aa8.97□□□□□ -0.97
SPC29YPL124W STS1P38637 319 aa8.97□□□□□ -0.97
SPC29YPL124W IOC2Q12072 812 aa8.95□□□□□ -0.98
SPC29YPL124W YFR006WP43590 535 aa8.94□□□□□ -0.98
SPC29YPL124W MSB4Q12317 492 aa8.94□□□□□ -0.98
SPC29YPL124W ULI1P43604 169 aa8.92□□□□□ -0.98
SPC29YPL124W AIR2Q12476 344 aaKnown RBP8.92□□□□□ -0.98
SPC29YPL124W VMA1P17255 1071 aaKnown RBP8.91□□□□□ -0.98
SPC29YPL124W FKH1P40466 484 aa8.91□□□□□ -0.98
SPC29YPL124W SAM3Q08986 587 aa8.9□□□□□ -0.98
SPC29YPL124W YOL036WQ08206 761 aa8.89□□□□□ -0.99
SPC29YPL124W EAP1P36041 632 aaKnown RBP8.87□□□□□ -0.99
SPC29YPL124W LDB19Q12502 818 aa8.87□□□□□ -0.99
SPC29YPL124W SET4P42948 560 aa8.85□□□□□ -0.99
SPC29YPL124W TRP5P00931 707 aaKnown RBP8.8□□□□□ -1
SPC29YPL124W YJL171CP46992 396 aa8.75□□□□□ -1.01
SPC29YPL124W RAM2P29703 316 aa8.74□□□□□ -1.01
SPC29YPL124W RTG1P32607 177 aa8.73□□□□□ -1.01
SPC29YPL124W YNL035CP53962 389 aaKnown RBP8.72□□□□□ -1.01
SPC29YPL124W GYP5Q12344 894 aa8.72□□□□□ -1.01
SPC29YPL124W ABP1P15891 592 aaKnown RBP8.71□□□□□ -1.02
SPC29YPL124W MAK11P20484 414 aaKnown RBP8.7□□□□□ -1.02
SPC29YPL124W SEC61P32915 480 aa8.7□□□□□ -1.02
SPC29YPL124W NCR1Q12200 1170 aa8.69□□□□□ -1.02
SPC29YPL124W BMT6Q12291 365 aa8.68□□□□□ -1.02
SPC29YPL124W DAN4P47179 1161 aa8.67□□□□□ -1.02
SPC29YPL124W JIP4Q03361 876 aa8.65□□□□□ -1.02
SPC29YPL124W HTA1P04911 132 aaKnown RBP8.63□□□□□ -1.03
SPC29YPL124W HTA2P04912 132 aa8.63□□□□□ -1.03
SPC29YPL124W DCW1P36091 449 aa8.63□□□□□ -1.03
SPC29YPL124W EDS1P38073 919 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms