RNA–Protein interactions for RNA: YDR471W

RPL27B, Transcript of Ribosomal 60S subunit protein L27B, yeastyeast

Gene RPL27B, Length 411 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL27BYDR471W MTC1P47018 478 aaKnown RBP13.73□□□□□ -0.21
RPL27BYDR471W FAP1P53971 965 aa12.84□□□□□ -0.35
RPL27BYDR471W DRS1P32892 752 aaKnown RBP12.34□□□□□ -0.43
RPL27BYDR471W PRY3P47033 881 aa12.1□□□□□ -0.47
RPL27BYDR471W PRI1P10363 409 aa11.84□□□□□ -0.51
RPL27BYDR471W AAD16Q02895 342 aa11.81□□□□□ -0.52
RPL27BYDR471W YCK3P39962 524 aa11.47□□□□□ -0.57
RPL27BYDR471W ISW2Q08773 1120 aa11.46□□□□□ -0.57
RPL27BYDR471W RPG1P38249 964 aaKnown RBP11.37□□□□□ -0.59
RPL27BYDR471W HAA1Q12753 694 aaKnown RBP11.33□□□□□ -0.6
RPL27BYDR471W TSR3Q12094 313 aaKnown RBP11.16□□□□□ -0.62
RPL27BYDR471W DIP2Q12220 943 aaPredicted RBP10.99□□□□□ -0.65
RPL27BYDR471W RSE1Q04693 1361 aaKnown RBP10.76□□□□□ -0.69
RPL27BYDR471W MRPL32P25348 183 aa10.7□□□□□ -0.7
RPL27BYDR471W AVT3P36062 692 aa10.48□□□□□ -0.73
RPL27BYDR471W RPL17AP05740 184 aaKnown RBP10.45□□□□□ -0.74
RPL27BYDR471W RPL17BP46990 184 aaKnown RBP10.45□□□□□ -0.74
RPL27BYDR471W REB1P21538 810 aa10.42□□□□□ -0.74
RPL27BYDR471W YGL015CP33199 130 aa10.4□□□□□ -0.74
RPL27BYDR471W CDC27P38042 758 aa10.12□□□□□ -0.79
RPL27BYDR471W BFR2Q06631 534 aaKnown RBP10.04□□□□□ -0.8
RPL27BYDR471W SPT21P35209 758 aa9.99□□□□□ -0.81
RPL27BYDR471W YKR023WP36119 530 aaKnown RBP9.98□□□□□ -0.81
RPL27BYDR471W UBP10P53874 792 aaPredicted RBP9.87□□□□□ -0.83
RPL27BYDR471W MAP2P38174 421 aaKnown RBP9.85□□□□□ -0.83
RPL27BYDR471W TFC8Q12308 588 aa9.77□□□□□ -0.85
RPL27BYDR471W HOP09932 586 aa9.76□□□□□ -0.85
RPL27BYDR471W BUD31P25337 157 aaPredicted RBP9.75□□□□□ -0.85
RPL27BYDR471W DCD1P06773 312 aa9.73□□□□□ -0.85
RPL27BYDR471W SCY1P53009 804 aa9.56□□□□□ -0.88
RPL27BYDR471W RIM101P33400 625 aa9.53□□□□□ -0.88
RPL27BYDR471W SLX5P32828 619 aaKnown RBP9.46□□□□□ -0.9
RPL27BYDR471W TIF4632P39936 914 aaKnown RBP9.46□□□□□ -0.9
RPL27BYDR471W TGL3P40308 642 aa9.45□□□□□ -0.9
RPL27BYDR471W BCH2P36122 765 aa9.44□□□□□ -0.9
RPL27BYDR471W UBP9P39967 754 aa9.27□□□□□ -0.93
RPL27BYDR471W SIS1P25294 352 aaKnown RBP9.22□□□□□ -0.93
RPL27BYDR471W OXP1P28273 1286 aa9.21□□□□□ -0.94
RPL27BYDR471W EPS1P40557 701 aa9.16□□□□□ -0.94
RPL27BYDR471W BDF1P35817 686 aa9.14□□□□□ -0.95
RPL27BYDR471W PTP3P40048 928 aa9.04□□□□□ -0.96
RPL27BYDR471W YIL055CP40523 627 aaKnown RBP9.03□□□□□ -0.96
RPL27BYDR471W MST1P07236 462 aa9.01□□□□□ -0.97
RPL27BYDR471W YOR238WQ08634 303 aa8.93□□□□□ -0.98
RPL27BYDR471W RSM7P47150 247 aa8.92□□□□□ -0.98
RPL27BYDR471W YBL029C-AQ3E756 94 aa8.92□□□□□ -0.98
RPL27BYDR471W NSR1P27476 414 aaKnown RBP RIP-Chip data8.91□□□□□ -0.98 RIP-Chip
RPL27BYDR471W BBC1P47068 1157 aa8.9□□□□□ -0.98
RPL27BYDR471W AI2P03876 854 aa8.88□□□□□ -0.99
RPL27BYDR471W YAH1Q12184 172 aaKnown RBP8.84□□□□□ -0.99
RPL27BYDR471W VNX1P42839 908 aa8.82□□□□□ -1
RPL27BYDR471W YAP5P40574 245 aa8.81□□□□□ -1
RPL27BYDR471W SPP1Q03012 353 aa8.72□□□□□ -1.01
RPL27BYDR471W WSC3Q12215 556 aa8.71□□□□□ -1.02
RPL27BYDR471W YLR271WQ06152 274 aa8.7□□□□□ -1.02
RPL27BYDR471W TFA1P36100 482 aa8.64□□□□□ -1.03
RPL27BYDR471W PSD2P53037 1138 aaKnown RBP8.63□□□□□ -1.03
RPL27BYDR471W TIF11P38912 153 aaKnown RBP8.62□□□□□ -1.03
RPL27BYDR471W GTT3P39996 337 aa8.61□□□□□ -1.03
RPL27BYDR471W AIR2Q12476 344 aaKnown RBP8.59□□□□□ -1.03
RPL27BYDR471W FKH1P40466 484 aa8.57□□□□□ -1.04
RPL27BYDR471W PIB1Q06651 286 aa8.54□□□□□ -1.04
RPL27BYDR471W MRM1P25270 412 aa8.53□□□□□ -1.04
RPL27BYDR471W YJL171CP46992 396 aa8.5□□□□□ -1.05
RPL27BYDR471W ULI1P43604 169 aa8.49□□□□□ -1.05
RPL27BYDR471W IOC2Q12072 812 aa8.48□□□□□ -1.05
RPL27BYDR471W LDB19Q12502 818 aa8.48□□□□□ -1.05
RPL27BYDR471W SSP1P38871 571 aa8.45□□□□□ -1.06
RPL27BYDR471W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.43□□□□□ -1.06not detected
RPL27BYDR471W MSB4Q12317 492 aa8.41□□□□□ -1.06
RPL27BYDR471W VPS29P38759 282 aa8.37□□□□□ -1.07
RPL27BYDR471W BMT6Q12291 365 aa8.37□□□□□ -1.07
RPL27BYDR471W EAP1P36041 632 aaKnown RBP8.36□□□□□ -1.07
RPL27BYDR471W YMR1P47147 688 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
RPL27BYDR471W CST9Q06032 482 aa8.36□□□□□ -1.07
RPL27BYDR471W YOL036WQ08206 761 aa8.36□□□□□ -1.07
RPL27BYDR471W DBP1P24784 617 aaKnown RBP8.34□□□□□ -1.07
RPL27BYDR471W SET4P42948 560 aa8.34□□□□□ -1.07
RPL27BYDR471W TRP5P00931 707 aaKnown RBP8.31□□□□□ -1.08
RPL27BYDR471W RTG3P38165 486 aa8.31□□□□□ -1.08
RPL27BYDR471W YFR006WP43590 535 aa8.31□□□□□ -1.08
RPL27BYDR471W RTG1P32607 177 aa8.3□□□□□ -1.08
RPL27BYDR471W MGA2P40578 1113 aa8.3□□□□□ -1.08
RPL27BYDR471W STS1P38637 319 aa8.29□□□□□ -1.08
RPL27BYDR471W VMA1P17255 1071 aaKnown RBP8.28□□□□□ -1.08
RPL27BYDR471W SAM3Q08986 587 aa8.26□□□□□ -1.09
RPL27BYDR471W NCR1Q12200 1170 aa8.25□□□□□ -1.09
RPL27BYDR471W YNL035CP53962 389 aaKnown RBP8.24□□□□□ -1.09
RPL27BYDR471W RCR1P38212 213 aa8.22□□□□□ -1.09
RPL27BYDR471W SEC61P32915 480 aa8.21□□□□□ -1.1
RPL27BYDR471W DAN4P47179 1161 aa8.13□□□□□ -1.11
RPL27BYDR471W GYP5Q12344 894 aa8.11□□□□□ -1.11
RPL27BYDR471W TFG1P41895 735 aaPredicted RBP8.1□□□□□ -1.11
RPL27BYDR471W ABP1P15891 592 aaKnown RBP8.09□□□□□ -1.11
RPL27BYDR471W JIP4Q03361 876 aa8.09□□□□□ -1.11
RPL27BYDR471W SAP30P38429 201 aa8.06□□□□□ -1.12
RPL27BYDR471W HTA1P04911 132 aaKnown RBP8.05□□□□□ -1.12
RPL27BYDR471W HTA2P04912 132 aa8.05□□□□□ -1.12
RPL27BYDR471W DCW1P36091 449 aa8.04□□□□□ -1.12
RPL27BYDR471W YDL129WQ07555 291 aa8.03□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms