RNA–Protein interactions for RNA: YCR001W

YCR001W, Transcript of Dubious open reading frame, yeastyeast

Gene YCR001W, Length 315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCR001WYCR001W MTC1P47018 478 aaKnown RBP14.89□□□□□ -0.03
YCR001WYCR001W DRS1P32892 752 aaKnown RBP13.96□□□□□ -0.17
YCR001WYCR001W FAP1P53971 965 aa13.41□□□□□ -0.26
YCR001WYCR001W PRY3P47033 881 aa12.59□□□□□ -0.39
YCR001WYCR001W PRI1P10363 409 aa12.54□□□□□ -0.4
YCR001WYCR001W AAD16Q02895 342 aa12.46□□□□□ -0.41
YCR001WYCR001W ISW2Q08773 1120 aa12.35□□□□□ -0.43
YCR001WYCR001W RPG1P38249 964 aaKnown RBP12.23□□□□□ -0.45
YCR001WYCR001W DIP2Q12220 943 aaPredicted RBP12.23□□□□□ -0.45
YCR001WYCR001W TSR3Q12094 313 aaKnown RBP11.87□□□□□ -0.51
YCR001WYCR001W YCK3P39962 524 aa11.84□□□□□ -0.51
YCR001WYCR001W RSE1Q04693 1361 aaKnown RBP11.8□□□□□ -0.52
YCR001WYCR001W HAA1Q12753 694 aaKnown RBP11.8□□□□□ -0.52
YCR001WYCR001W AVT3P36062 692 aa11.76□□□□□ -0.53
YCR001WYCR001W BFR2Q06631 534 aaKnown RBP11.62□□□□□ -0.55
YCR001WYCR001W RPL17AP05740 184 aaKnown RBP11.44□□□□□ -0.58
YCR001WYCR001W RPL17BP46990 184 aaKnown RBP11.44□□□□□ -0.58
YCR001WYCR001W MRPL32P25348 183 aa11.41□□□□□ -0.58
YCR001WYCR001W REB1P21538 810 aa11.39□□□□□ -0.59
YCR001WYCR001W YGL015CP33199 130 aa10.92□□□□□ -0.66
YCR001WYCR001W SPT21P35209 758 aa10.91□□□□□ -0.66
YCR001WYCR001W CDC27P38042 758 aa10.83□□□□□ -0.68
YCR001WYCR001W YKR023WP36119 530 aaKnown RBP10.8□□□□□ -0.68
YCR001WYCR001W HOP09932 586 aa10.6□□□□□ -0.71
YCR001WYCR001W TFC8Q12308 588 aa10.58□□□□□ -0.72
YCR001WYCR001W DCD1P06773 312 aa10.55□□□□□ -0.72
YCR001WYCR001W RIM101P33400 625 aa10.55□□□□□ -0.72
YCR001WYCR001W UBP10P53874 792 aaPredicted RBP10.5□□□□□ -0.73
YCR001WYCR001W MAP2P38174 421 aaKnown RBP10.49□□□□□ -0.73
YCR001WYCR001W SCY1P53009 804 aa10.29□□□□□ -0.76
YCR001WYCR001W BCH2P36122 765 aa10.24□□□□□ -0.77
YCR001WYCR001W OXP1P28273 1286 aa10.2□□□□□ -0.78
YCR001WYCR001W TFA1P36100 482 aa10.2□□□□□ -0.78
YCR001WYCR001W SLX5P32828 619 aaKnown RBP10.16□□□□□ -0.78
YCR001WYCR001W TIF4632P39936 914 aaKnown RBP10.1□□□□□ -0.79
YCR001WYCR001W YIL055CP40523 627 aaKnown RBP10.09□□□□□ -0.79
YCR001WYCR001W PTP3P40048 928 aa10.07□□□□□ -0.8
YCR001WYCR001W TGL3P40308 642 aa10.04□□□□□ -0.8
YCR001WYCR001W EPS1P40557 701 aa9.99□□□□□ -0.81
YCR001WYCR001W BUD31P25337 157 aaPredicted RBP9.98□□□□□ -0.81
YCR001WYCR001W BDF1P35817 686 aa9.95□□□□□ -0.82
YCR001WYCR001W YAH1Q12184 172 aaKnown RBP9.94□□□□□ -0.82
YCR001WYCR001W RSM7P47150 247 aa9.91□□□□□ -0.82
YCR001WYCR001W BBC1P47068 1157 aa9.83□□□□□ -0.84
YCR001WYCR001W AI2P03876 854 aa9.82□□□□□ -0.84
YCR001WYCR001W UBP9P39967 754 aa9.74□□□□□ -0.85
YCR001WYCR001W YLR271WQ06152 274 aa9.74□□□□□ -0.85
YCR001WYCR001W SSP1P38871 571 aa9.64□□□□□ -0.87
YCR001WYCR001W YOR238WQ08634 303 aa9.62□□□□□ -0.87
YCR001WYCR001W MST1P07236 462 aa9.6□□□□□ -0.87
YCR001WYCR001W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.59□□□□□ -0.87not detected
YCR001WYCR001W PSD2P53037 1138 aaKnown RBP9.58□□□□□ -0.88
YCR001WYCR001W NSR1P27476 414 aaKnown RBP RIP-Chip data9.57□□□□□ -0.88not detected
YCR001WYCR001W SIS1P25294 352 aaKnown RBP9.54□□□□□ -0.88
YCR001WYCR001W YAP5P40574 245 aa9.54□□□□□ -0.88
YCR001WYCR001W MRM1P25270 412 aa9.48□□□□□ -0.89
YCR001WYCR001W YBL029C-AQ3E756 94 aa9.47□□□□□ -0.89
YCR001WYCR001W MGA2P40578 1113 aa9.4□□□□□ -0.9
YCR001WYCR001W CST9Q06032 482 aa9.4□□□□□ -0.9
YCR001WYCR001W VNX1P42839 908 aa9.37□□□□□ -0.91
YCR001WYCR001W WSC3Q12215 556 aa9.36□□□□□ -0.91
YCR001WYCR001W GTT3P39996 337 aa9.35□□□□□ -0.91
YCR001WYCR001W PIB1Q06651 286 aa9.34□□□□□ -0.91
YCR001WYCR001W SPP1Q03012 353 aa9.29□□□□□ -0.92
YCR001WYCR001W RTG3P38165 486 aa9.28□□□□□ -0.92
YCR001WYCR001W VPS29P38759 282 aa9.25□□□□□ -0.93
YCR001WYCR001W YMR1P47147 688 aaKnown RBP RIP-Chip data9.24□□□□□ -0.93not detected
YCR001WYCR001W TIF11P38912 153 aaKnown RBP9.21□□□□□ -0.94
YCR001WYCR001W DBP1P24784 617 aaKnown RBP9.2□□□□□ -0.94
YCR001WYCR001W YFR006WP43590 535 aa9.18□□□□□ -0.94
YCR001WYCR001W RCR1P38212 213 aa9.17□□□□□ -0.94
YCR001WYCR001W STS1P38637 319 aa9.14□□□□□ -0.95
YCR001WYCR001W ULI1P43604 169 aa9.13□□□□□ -0.95
YCR001WYCR001W MSB4Q12317 492 aa9.09□□□□□ -0.95
YCR001WYCR001W VMA1P17255 1071 aaKnown RBP9.08□□□□□ -0.96
YCR001WYCR001W YOL036WQ08206 761 aa9.08□□□□□ -0.96
YCR001WYCR001W SET4P42948 560 aa9.07□□□□□ -0.96
YCR001WYCR001W IOC2Q12072 812 aa9.07□□□□□ -0.96
YCR001WYCR001W LDB19Q12502 818 aa9.07□□□□□ -0.96
YCR001WYCR001W EAP1P36041 632 aaKnown RBP9.05□□□□□ -0.96
YCR001WYCR001W FKH1P40466 484 aa9.05□□□□□ -0.96
YCR001WYCR001W AIR2Q12476 344 aaKnown RBP9.05□□□□□ -0.96
YCR001WYCR001W SAM3Q08986 587 aa9.01□□□□□ -0.97
YCR001WYCR001W YJL171CP46992 396 aa9□□□□□ -0.97
YCR001WYCR001W TRP5P00931 707 aaKnown RBP8.98□□□□□ -0.97
YCR001WYCR001W RTG1P32607 177 aa8.93□□□□□ -0.98
YCR001WYCR001W GYP5Q12344 894 aa8.92□□□□□ -0.98
YCR001WYCR001W RAM2P29703 316 aa8.91□□□□□ -0.98
YCR001WYCR001W YNL035CP53962 389 aaKnown RBP8.89□□□□□ -0.99
YCR001WYCR001W MAK11P20484 414 aaKnown RBP8.88□□□□□ -0.99
YCR001WYCR001W BMT6Q12291 365 aa8.88□□□□□ -0.99
YCR001WYCR001W ABP1P15891 592 aaKnown RBP8.87□□□□□ -0.99
YCR001WYCR001W NCR1Q12200 1170 aa8.87□□□□□ -0.99
YCR001WYCR001W MIF2P35201 549 aa8.85□□□□□ -0.99
YCR001WYCR001W DCW1P36091 449 aa8.85□□□□□ -0.99
YCR001WYCR001W SEC61P32915 480 aa8.84□□□□□ -0.99
YCR001WYCR001W HTA1P04911 132 aaKnown RBP8.83□□□□□ -1
YCR001WYCR001W HTA2P04912 132 aa8.83□□□□□ -1
YCR001WYCR001W JIP4Q03361 876 aa8.8□□□□□ -1
YCR001WYCR001W GRE2Q12068 342 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms