RNA–Protein interactions for RNA: YDL132W

CDC53, Transcript of Cullin, yeastyeast

Gene CDC53, Length 2,448 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC53YDL132W DRS1P32892 752 aaKnown RBP5.81□□□□□ -1.48
CDC53YDL132W MTC1P47018 478 aaKnown RBP5.37□□□□□ -1.55
CDC53YDL132W BFR2Q06631 534 aaKnown RBP5.18□□□□□ -1.58
CDC53YDL132W TFA1P36100 482 aa5.01□□□□□ -1.61
CDC53YDL132W DIP2Q12220 943 aaPredicted RBP4.8□□□□□ -1.64
CDC53YDL132W AVT3P36062 692 aa4.77□□□□□ -1.65
CDC53YDL132W FAP1P53971 965 aa4.68□□□□□ -1.66
CDC53YDL132W RQC2Q12532 1038 aaKnown RBP4.67□□□□□ -1.66
CDC53YDL132W PRI1P10363 409 aa4.48□□□□□ -1.69
CDC53YDL132W YCK3P39962 524 aa4.47□□□□□ -1.69
CDC53YDL132W PRY3P47033 881 aa4.45□□□□□ -1.7
CDC53YDL132W RSE1Q04693 1361 aaKnown RBP4.44□□□□□ -1.7
CDC53YDL132W AAD16Q02895 342 aa4.38□□□□□ -1.71
CDC53YDL132W ISW2Q08773 1120 aa4.34□□□□□ -1.72
CDC53YDL132W DMA1P38823 416 aa4.33□□□□□ -1.72
CDC53YDL132W PTP3P40048 928 aa4.29□□□□□ -1.72
CDC53YDL132W RPL17AP05740 184 aaKnown RBP4.28□□□□□ -1.72
CDC53YDL132W RPL17BP46990 184 aaKnown RBP4.28□□□□□ -1.72
CDC53YDL132W RPG1P38249 964 aaKnown RBP4.27□□□□□ -1.73
CDC53YDL132W REB1P21538 810 aa4.23□□□□□ -1.73
CDC53YDL132W TAF7Q05021 590 aa4.19□□□□□ -1.74
CDC53YDL132W TSR3Q12094 313 aaKnown RBP4.17□□□□□ -1.74
CDC53YDL132W HAA1Q12753 694 aaKnown RBP4.16□□□□□ -1.74
CDC53YDL132W SSP1P38871 571 aa4.09□□□□□ -1.76
CDC53YDL132W YAH1Q12184 172 aaKnown RBP4.08□□□□□ -1.76
CDC53YDL132W RIM101P33400 625 aa4.06□□□□□ -1.76
CDC53YDL132W SPT21P35209 758 aa4.06□□□□□ -1.76
CDC53YDL132W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77 RIP-Chip
CDC53YDL132W LEO1P38439 464 aa4.02□□□□□ -1.77
CDC53YDL132W YIL055CP40523 627 aaKnown RBP4□□□□□ -1.77
CDC53YDL132W OXP1P28273 1286 aa3.97□□□□□ -1.77
CDC53YDL132W YLR271WQ06152 274 aa3.94□□□□□ -1.78
CDC53YDL132W MRPL32P25348 183 aa3.92□□□□□ -1.78
CDC53YDL132W MGA2P40578 1113 aa3.9□□□□□ -1.79
CDC53YDL132W LEU3P08638 886 aa3.89□□□□□ -1.79
CDC53YDL132W RSM7P47150 247 aa3.87□□□□□ -1.79
CDC53YDL132W HOP09932 586 aa3.86□□□□□ -1.79
CDC53YDL132W YKR023WP36119 530 aaKnown RBP3.86□□□□□ -1.79
CDC53YDL132W SAS10Q12136 610 aaPredicted RBP3.86□□□□□ -1.79
CDC53YDL132W BUD31P25337 157 aaPredicted RBP3.86□□□□□ -1.79
CDC53YDL132W CDC27P38042 758 aa3.86□□□□□ -1.79
CDC53YDL132W CST9Q06032 482 aa3.86□□□□□ -1.79
CDC53YDL132W DCD1P06773 312 aa3.84□□□□□ -1.79
CDC53YDL132W YGL015CP33199 130 aa3.84□□□□□ -1.8
CDC53YDL132W AI2P03876 854 aa3.8□□□□□ -1.8
CDC53YDL132W SPB4P25808 606 aaPredicted RBP3.8□□□□□ -1.8
CDC53YDL132W DMA2P53924 522 aa3.8□□□□□ -1.8
CDC53YDL132W TFC8Q12308 588 aa3.8□□□□□ -1.8
CDC53YDL132W RPN1P38764 993 aaKnown RBP3.78□□□□□ -1.8
CDC53YDL132W BBC1P47068 1157 aa3.78□□□□□ -1.81
CDC53YDL132W PSD2P53037 1138 aaKnown RBP3.77□□□□□ -1.81
CDC53YDL132W VPS70P47161 811 aa3.76□□□□□ -1.81
CDC53YDL132W SET1P38827 1080 aaKnown RBP3.75□□□□□ -1.81
CDC53YDL132W MRM1P25270 412 aa3.73□□□□□ -1.81
CDC53YDL132W RAM2P29703 316 aa3.73□□□□□ -1.81
CDC53YDL132W BCH2P36122 765 aa3.71□□□□□ -1.82
CDC53YDL132W MAP2P38174 421 aaKnown RBP3.71□□□□□ -1.82
CDC53YDL132W CKB1P43639 278 aa3.71□□□□□ -1.82
CDC53YDL132W RCR1P38212 213 aa3.7□□□□□ -1.82
CDC53YDL132W EPS1P40557 701 aa3.69□□□□□ -1.82
CDC53YDL132W UBP10P53874 792 aaPredicted RBP3.69□□□□□ -1.82
CDC53YDL132W IFH1P39520 1085 aa3.68□□□□□ -1.82
CDC53YDL132W RTG3P38165 486 aa3.66□□□□□ -1.82
CDC53YDL132W RLF2Q12495 606 aa3.66□□□□□ -1.82
CDC53YDL132W YPR148CQ06523 435 aa3.65□□□□□ -1.82
CDC53YDL132W PBS2P08018 668 aa3.65□□□□□ -1.83
CDC53YDL132W BDF1P35817 686 aa3.64□□□□□ -1.83
CDC53YDL132W MAK11P20484 414 aaKnown RBP3.63□□□□□ -1.83
CDC53YDL132W SCY1P53009 804 aa3.63□□□□□ -1.83
CDC53YDL132W KIN1P13185 1064 aa3.63□□□□□ -1.83
CDC53YDL132W GLC3P32775 704 aa3.63□□□□□ -1.83
CDC53YDL132W ABP1P15891 592 aaKnown RBP3.62□□□□□ -1.83
CDC53YDL132W HGH1P48362 394 aaKnown RBP3.62□□□□□ -1.83
CDC53YDL132W SIS1P25294 352 aaKnown RBP3.61□□□□□ -1.83
CDC53YDL132W MIF2P35201 549 aa3.61□□□□□ -1.83
CDC53YDL132W DSF2P38213 736 aa3.61□□□□□ -1.83
CDC53YDL132W MAM3Q12296 706 aa3.61□□□□□ -1.83
CDC53YDL132W COQ8P27697 501 aa3.61□□□□□ -1.83
CDC53YDL132W IES2P40154 320 aa3.6□□□□□ -1.83
CDC53YDL132W YNR021WP53723 404 aaKnown RBP3.6□□□□□ -1.83
CDC53YDL132W REF2P42073 533 aaPredicted RBP3.56□□□□□ -1.84
CDC53YDL132W YFR006WP43590 535 aa3.56□□□□□ -1.84
CDC53YDL132W ATF2P53296 535 aa3.56□□□□□ -1.84
CDC53YDL132W DIT2P21595 489 aa3.55□□□□□ -1.84
CDC53YDL132W VPS29P38759 282 aa3.55□□□□□ -1.84
CDC53YDL132W YMR1P47147 688 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
CDC53YDL132W AIM7Q12156 149 aa3.54□□□□□ -1.84
CDC53YDL132W GUA1P38625 525 aaKnown RBP3.53□□□□□ -1.84
CDC53YDL132W TGL3P40308 642 aa3.53□□□□□ -1.84
CDC53YDL132W DBP1P24784 617 aaKnown RBP3.52□□□□□ -1.85
CDC53YDL132W EDS1P38073 919 aa3.52□□□□□ -1.85
CDC53YDL132W STS1P38637 319 aa3.52□□□□□ -1.85
CDC53YDL132W SLX5P32828 619 aaKnown RBP3.52□□□□□ -1.85
CDC53YDL132W NUP42P49686 430 aaKnown RBP3.52□□□□□ -1.85
CDC53YDL132W MAK21Q12176 1025 aaKnown RBP3.51□□□□□ -1.85
CDC53YDL132W PIB1Q06651 286 aa3.51□□□□□ -1.85
CDC53YDL132W BRL1P38770 471 aa3.5□□□□□ -1.85
CDC53YDL132W VHR2P40041 505 aa3.5□□□□□ -1.85
CDC53YDL132W TFB3Q03290 321 aa3.5□□□□□ -1.85
CDC53YDL132W YOR238WQ08634 303 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms