Protein–RNA interactions for Protein: P47013

LCB3, Dihydrosphingosine 1-phosphate phosphatase LCB3, yeastyeast

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB3P47013 IRA2YOL081W 9240 nt1.93□□□□□ -2.1
LCB3P47013 RRP6YOR001W 2202 nt1.93□□□□□ -2.1
LCB3P47013 YDL041WYDL041W 354 nt1.93□□□□□ -2.1
LCB3P47013 YGR025WYGR025W 303 nt1.93□□□□□ -2.1
LCB3P47013 YHR180W-AYHR180W-A 183 nt1.93□□□□□ -2.1
LCB3P47013 PTP3YER075C 2787 nt1.93□□□□□ -2.1
LCB3P47013 TAE2YPL009C 3117 nt1.93□□□□□ -2.1
LCB3P47013 NOP10YHR072W-A 177 nt1.92□□□□□ -2.1
LCB3P47013 PET191YJR034W 327 nt1.92□□□□□ -2.1
LCB3P47013 YLR406C-AYLR406C-A 150 nt1.92□□□□□ -2.1
LCB3P47013 CMC2YBL059C-A 330 nt1.92□□□□□ -2.1
LCB3P47013 BFA1YJR053W 1725 nt1.91□□□□□ -2.1
LCB3P47013 SVL3YPL032C 2478 nt1.91□□□□□ -2.1
LCB3P47013 ATP17YDR377W 306 nt1.91□□□□□ -2.1
LCB3P47013 TIM9YEL020W-A 264 nt1.91□□□□□ -2.1
LCB3P47013 PAU8YAL068C 363 nt1.91□□□□□ -2.1
LCB3P47013 COX7YMR256C 183 nt1.91□□□□□ -2.1
LCB3P47013 TIF11YMR260C 462 nt1.91□□□□□ -2.1
LCB3P47013 YMR324CYMR324C 243 nt1.91□□□□□ -2.1
LCB3P47013 PAU20YOL161C 363 nt1.91□□□□□ -2.1
LCB3P47013 RSA1YPL193W 1146 nt1.91□□□□□ -2.1
LCB3P47013 VMA9YCL005W-A 222 nt1.91□□□□□ -2.1
LCB3P47013 YOL098CYOL098C 3114 nt1.91□□□□□ -2.1
LCB3P47013 STE11YLR362W 2154 nt1.91□□□□□ -2.1
LCB3P47013 IRC10YOL015W 1761 nt1.9□□□□□ -2.1
LCB3P47013 SWT1YOR166C 1377 nt1.9□□□□□ -2.11
LCB3P47013 YER068C-AYER068C-A 432 nt1.9□□□□□ -2.11
LCB3P47013 HUR1YGL168W 333 nt1.9□□□□□ -2.11
LCB3P47013 SMD1YGR074W 441 nt1.9□□□□□ -2.11
LCB3P47013 YIL156W-BYIL156W-B 222 nt1.9□□□□□ -2.11
LCB3P47013 MSL1YIR009W 336 nt1.9□□□□□ -2.11
LCB3P47013 YLR154W-EYLR154W-E 204 nt1.9□□□□□ -2.11
LCB3P47013 RRT1YBL048W 312 nt1.9□□□□□ -2.11
LCB3P47013 CDC33YOL139C 642 nt1.9□□□□□ -2.11
LCB3P47013 YBR032WYBR032W 303 nt1.9□□□□□ -2.11
LCB3P47013 BNI1YNL271C 5862 nt1.9□□□□□ -2.11
LCB3P47013 FKS3YMR306W 5358 nt1.9□□□□□ -2.11
LCB3P47013 AFI1YOR129C 2682 nt1.89□□□□□ -2.11
LCB3P47013 SNX41YDR425W 1878 nt1.89□□□□□ -2.11
LCB3P47013 CDC50YCR094W 1176 nt1.89□□□□□ -2.11
LCB3P47013 YDR114CYDR114C 303 nt1.89□□□□□ -2.11
LCB3P47013 SNC1YAL030W 354 nt1.89□□□□□ -2.11
LCB3P47013 YLR154W-AYLR154W-A 186 nt1.89□□□□□ -2.11
LCB3P47013 SEC22YLR268W 645 nt1.89□□□□□ -2.11
LCB3P47013 RPS17AYML024W 411 nt1.89□□□□□ -2.11
LCB3P47013 MSS18YPR134W 807 nt1.89□□□□□ -2.11
LCB3P47013 NIC96YFR002W 2520 nt1.89□□□□□ -2.11
LCB3P47013 UBR1YGR184C 5853 nt1.88□□□□□ -2.11
LCB3P47013 CDC53YDL132W 2448 nt1.88□□□□□ -2.11
LCB3P47013 YCR064CYCR064C 411 nt1.88□□□□□ -2.11
LCB3P47013 YER135CYER135C 393 nt1.88□□□□□ -2.11
LCB3P47013 RRF1YHR038W 693 nt1.88□□□□□ -2.11
LCB3P47013 RPS22BYLR367W 393 nt1.88□□□□□ -2.11
LCB3P47013 VTI1YMR197C 654 nt1.88□□□□□ -2.11
LCB3P47013 FYV12YOR183W 390 nt1.88□□□□□ -2.11
LCB3P47013 NUP120YKL057C 3114 nt1.88□□□□□ -2.11
LCB3P47013 RGA1YOR127W 3024 nt1.88□□□□□ -2.11
LCB3P47013 KAP123YER110C 3342 nt1.88□□□□□ -2.11
LCB3P47013 MSS11YMR164C 2277 nt1.87□□□□□ -2.11
LCB3P47013 snR79snR79 84 nt1.87□□□□□ -2.11
LCB3P47013 RTC6YPL183W-A 282 nt1.87□□□□□ -2.11
LCB3P47013 VPS35YJL154C 2835 nt1.87□□□□□ -2.11
LCB3P47013 SKP2YNL311C 2292 nt1.87□□□□□ -2.11
LCB3P47013 YPR097WYPR097W 3222 nt1.87□□□□□ -2.11
LCB3P47013 SEC16YPL085W 6588 nt1.87□□□□□ -2.11
LCB3P47013 YSW1YBR148W 1830 nt1.87□□□□□ -2.11
LCB3P47013 STH1YIL126W 4080 nt1.86□□□□□ -2.11
LCB3P47013 PHO91YNR013C 2685 nt1.86□□□□□ -2.11
LCB3P47013 SPC72YAL047C 1869 nt1.86□□□□□ -2.11
LCB3P47013 SOK2YMR016C 2358 nt1.86□□□□□ -2.11
LCB3P47013 YER121WYER121W 345 nt1.86□□□□□ -2.11
LCB3P47013 AGA2YGL032C 264 nt1.86□□□□□ -2.11
LCB3P47013 YHR139C-AYHR139C-A 312 nt1.86□□□□□ -2.11
LCB3P47013 CRG1YHR209W 876 nt1.86□□□□□ -2.11
LCB3P47013 UTP30YKR060W 825 nt1.86□□□□□ -2.11
LCB3P47013 ZEO1YOL109W 342 nt1.86□□□□□ -2.11
LCB3P47013 ERP4YOR016C 624 nt1.86□□□□□ -2.11
LCB3P47013 KAR3YPR141C 2190 nt1.86□□□□□ -2.11
LCB3P47013 CDC24YAL041W 2565 nt1.86□□□□□ -2.11
LCB3P47013 COX1Q0045 1605 nt1.85□□□□□ -2.11
LCB3P47013 MSB1YOR188W 3414 nt1.85□□□□□ -2.11
LCB3P47013 PEX4YGR133W 552 nt1.85□□□□□ -2.11
LCB3P47013 NFU1YKL040C 771 nt1.85□□□□□ -2.11
LCB3P47013 EMC6YLL014W 327 nt1.85□□□□□ -2.11
LCB3P47013 SNC2YOR327C 348 nt1.85□□□□□ -2.11
LCB3P47013 SCD5YOR329C 2619 nt1.85□□□□□ -2.11
LCB3P47013 MET18YIL128W 3099 nt1.85□□□□□ -2.11
LCB3P47013 SMC6YLR383W 3345 nt1.84□□□□□ -2.11
LCB3P47013 SPO22YIL073C 2928 nt1.84□□□□□ -2.11
LCB3P47013 RAV1YJR033C 4074 nt1.84□□□□□ -2.11
LCB3P47013 MCD1YDL003W 1701 nt1.84□□□□□ -2.11
LCB3P47013 CLN3YAL040C 1743 nt1.84□□□□□ -2.11
LCB3P47013 LSO2YGR169C-A 279 nt1.84□□□□□ -2.11
LCB3P47013 RPS18BYML026C 441 nt1.84□□□□□ -2.11
LCB3P47013 EGD1YPL037C 474 nt1.84□□□□□ -2.11
LCB3P47013 DNA2YHR164C 4569 nt1.84□□□□□ -2.11
LCB3P47013 PDR11YIL013C 4236 nt1.84□□□□□ -2.12
LCB3P47013 CRM1YGR218W 3255 nt1.84□□□□□ -2.12
LCB3P47013 SSD1YDR293C 3753 nt1.83□□□□□ -2.12
LCB3P47013 YLR154W-FYLR154W-F 141 nt1.83□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 80.3 ms