RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeastyeast

Gene TIF11, Length 462 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIF11YMR260C MTC1P47018 478 aaKnown RBP12.06□□□□□ -0.48
TIF11YMR260C FAP1P53971 965 aa11.6□□□□□ -0.55
TIF11YMR260C DRS1P32892 752 aaKnown RBP11.29□□□□□ -0.6
TIF11YMR260C PRY3P47033 881 aa10.84□□□□□ -0.67
TIF11YMR260C AAD16Q02895 342 aa10.4□□□□□ -0.74
TIF11YMR260C PRI1P10363 409 aa10.28□□□□□ -0.76
TIF11YMR260C HAA1Q12753 694 aaKnown RBP10.19□□□□□ -0.78
TIF11YMR260C ISW2Q08773 1120 aa10.03□□□□□ -0.8
TIF11YMR260C DIP2Q12220 943 aaPredicted RBP9.88□□□□□ -0.83
TIF11YMR260C RPG1P38249 964 aaKnown RBP9.81□□□□□ -0.84
TIF11YMR260C YCK3P39962 524 aa9.81□□□□□ -0.84
TIF11YMR260C TSR3Q12094 313 aaKnown RBP9.66□□□□□ -0.86
TIF11YMR260C AVT3P36062 692 aa9.6□□□□□ -0.87
TIF11YMR260C RSE1Q04693 1361 aaKnown RBP9.56□□□□□ -0.88
TIF11YMR260C MRPL32P25348 183 aa9.47□□□□□ -0.89
TIF11YMR260C BFR2Q06631 534 aaKnown RBP9.43□□□□□ -0.9
TIF11YMR260C YGL015CP33199 130 aa9.32□□□□□ -0.92
TIF11YMR260C RPL17AP05740 184 aaKnown RBP9.21□□□□□ -0.94
TIF11YMR260C RPL17BP46990 184 aaKnown RBP9.21□□□□□ -0.94
TIF11YMR260C REB1P21538 810 aa9.16□□□□□ -0.94
TIF11YMR260C SPT21P35209 758 aa8.9□□□□□ -0.98
TIF11YMR260C BUD31P25337 157 aaPredicted RBP8.77□□□□□ -1.01
TIF11YMR260C YKR023WP36119 530 aaKnown RBP8.74□□□□□ -1.01
TIF11YMR260C CDC27P38042 758 aa8.72□□□□□ -1.01
TIF11YMR260C UBP10P53874 792 aaPredicted RBP8.64□□□□□ -1.03
TIF11YMR260C RIM101P33400 625 aa8.6□□□□□ -1.03
TIF11YMR260C TFC8Q12308 588 aa8.57□□□□□ -1.04
TIF11YMR260C HOP09932 586 aa8.49□□□□□ -1.05
TIF11YMR260C MAP2P38174 421 aaKnown RBP8.48□□□□□ -1.05
TIF11YMR260C TIF4632P39936 914 aaKnown RBP8.45□□□□□ -1.06
TIF11YMR260C UBP9P39967 754 aa8.45□□□□□ -1.06
TIF11YMR260C DCD1P06773 312 aa8.43□□□□□ -1.06
TIF11YMR260C TFA1P36100 482 aa8.43□□□□□ -1.06
TIF11YMR260C SIS1P25294 352 aaKnown RBP8.41□□□□□ -1.06
TIF11YMR260C TGL3P40308 642 aa8.3□□□□□ -1.08
TIF11YMR260C OXP1P28273 1286 aa8.27□□□□□ -1.09
TIF11YMR260C SCY1P53009 804 aa8.27□□□□□ -1.09
TIF11YMR260C BCH2P36122 765 aa8.26□□□□□ -1.09
TIF11YMR260C SLX5P32828 619 aaKnown RBP8.25□□□□□ -1.09
TIF11YMR260C YIL055CP40523 627 aaKnown RBP8.12□□□□□ -1.11
TIF11YMR260C PTP3P40048 928 aa8.1□□□□□ -1.11
TIF11YMR260C EPS1P40557 701 aa8.08□□□□□ -1.12
TIF11YMR260C BDF1P35817 686 aa8.04□□□□□ -1.12
TIF11YMR260C RSM7P47150 247 aa8.04□□□□□ -1.12
TIF11YMR260C BBC1P47068 1157 aa7.97□□□□□ -1.13
TIF11YMR260C YAH1Q12184 172 aaKnown RBP7.96□□□□□ -1.14
TIF11YMR260C AI2P03876 854 aa7.95□□□□□ -1.14
TIF11YMR260C NSR1P27476 414 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14 RIP-Chip
TIF11YMR260C YLR271WQ06152 274 aa7.91□□□□□ -1.14
TIF11YMR260C SSP1P38871 571 aa7.85□□□□□ -1.15
TIF11YMR260C MST1P07236 462 aa7.84□□□□□ -1.15
TIF11YMR260C PSD2P53037 1138 aaKnown RBP7.83□□□□□ -1.16
TIF11YMR260C YOR238WQ08634 303 aa7.83□□□□□ -1.16
TIF11YMR260C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
TIF11YMR260C YBL029C-AQ3E756 94 aa7.77□□□□□ -1.17
TIF11YMR260C YAP5P40574 245 aa7.75□□□□□ -1.17
TIF11YMR260C YJL171CP46992 396 aa7.74□□□□□ -1.17
TIF11YMR260C SPP1Q03012 353 aa7.7□□□□□ -1.18
TIF11YMR260C MGA2P40578 1113 aa7.67□□□□□ -1.18
TIF11YMR260C VNX1P42839 908 aa7.67□□□□□ -1.18
TIF11YMR260C MRM1P25270 412 aa7.64□□□□□ -1.19
TIF11YMR260C CST9Q06032 482 aa7.61□□□□□ -1.19
TIF11YMR260C GTT3P39996 337 aa7.59□□□□□ -1.19
TIF11YMR260C WSC3Q12215 556 aa7.59□□□□□ -1.19
TIF11YMR260C RTG3P38165 486 aa7.53□□□□□ -1.2
TIF11YMR260C VPS29P38759 282 aa7.52□□□□□ -1.21
TIF11YMR260C TIF11P38912 153 aaKnown RBP7.52□□□□□ -1.21
TIF11YMR260C YMR1P47147 688 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21 RIP-Chip
TIF11YMR260C AIR2Q12476 344 aaKnown RBP7.48□□□□□ -1.21
TIF11YMR260C BMT6Q12291 365 aa7.46□□□□□ -1.22
TIF11YMR260C PIB1Q06651 286 aa7.45□□□□□ -1.22
TIF11YMR260C DBP1P24784 617 aaKnown RBP7.44□□□□□ -1.22
TIF11YMR260C FKH1P40466 484 aa7.44□□□□□ -1.22
TIF11YMR260C MSB4Q12317 492 aa7.44□□□□□ -1.22
TIF11YMR260C STS1P38637 319 aa7.43□□□□□ -1.22
TIF11YMR260C RCR1P38212 213 aa7.42□□□□□ -1.22
TIF11YMR260C ULI1P43604 169 aa7.4□□□□□ -1.22
TIF11YMR260C LDB19Q12502 818 aa7.4□□□□□ -1.22
TIF11YMR260C VMA1P17255 1071 aaKnown RBP7.39□□□□□ -1.23
TIF11YMR260C SAM3Q08986 587 aa7.39□□□□□ -1.23
TIF11YMR260C EAP1P36041 632 aaKnown RBP7.37□□□□□ -1.23
TIF11YMR260C YFR006WP43590 535 aa7.37□□□□□ -1.23
TIF11YMR260C YOL036WQ08206 761 aa7.37□□□□□ -1.23
TIF11YMR260C IOC2Q12072 812 aa7.36□□□□□ -1.23
TIF11YMR260C ABP1P15891 592 aaKnown RBP7.31□□□□□ -1.24
TIF11YMR260C SET4P42948 560 aa7.31□□□□□ -1.24
TIF11YMR260C TRP5P00931 707 aaKnown RBP7.27□□□□□ -1.25
TIF11YMR260C MAK11P20484 414 aaKnown RBP7.27□□□□□ -1.25
TIF11YMR260C RAM2P29703 316 aa7.27□□□□□ -1.25
TIF11YMR260C TFG1P41895 735 aaPredicted RBP7.27□□□□□ -1.25
TIF11YMR260C NCR1Q12200 1170 aa7.25□□□□□ -1.25
TIF11YMR260C YNL035CP53962 389 aaKnown RBP7.23□□□□□ -1.25
TIF11YMR260C GYP5Q12344 894 aa7.23□□□□□ -1.25
TIF11YMR260C RTG1P32607 177 aa7.21□□□□□ -1.26
TIF11YMR260C SEC61P32915 480 aa7.21□□□□□ -1.26
TIF11YMR260C JIP4Q03361 876 aa7.19□□□□□ -1.26
TIF11YMR260C HTA1P04911 132 aaKnown RBP7.18□□□□□ -1.26
TIF11YMR260C HTA2P04912 132 aa7.18□□□□□ -1.26
TIF11YMR260C DAN4P47179 1161 aa7.16□□□□□ -1.26
TIF11YMR260C EDS1P38073 919 aa7.15□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms