RNA–Protein interactions for RNA: YOL139C

CDC33, Transcript of mRNA cap binding protein and translation initiation factor eIF4E, yeastyeast

Gene CDC33, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC33YOL139C MTC1P47018 478 aaKnown RBP11.91□□□□□ -0.5
CDC33YOL139C FAP1P53971 965 aa11.59□□□□□ -0.55
CDC33YOL139C PRY3P47033 881 aa10.91□□□□□ -0.66
CDC33YOL139C AAD16Q02895 342 aa10.54□□□□□ -0.72
CDC33YOL139C PRI1P10363 409 aa10.5□□□□□ -0.73
CDC33YOL139C DRS1P32892 752 aaKnown RBP10.29□□□□□ -0.76
CDC33YOL139C YCK3P39962 524 aa10.27□□□□□ -0.77
CDC33YOL139C HAA1Q12753 694 aaKnown RBP10.27□□□□□ -0.77
CDC33YOL139C ISW2Q08773 1120 aa10.07□□□□□ -0.8
CDC33YOL139C RPG1P38249 964 aaKnown RBP9.95□□□□□ -0.82
CDC33YOL139C TSR3Q12094 313 aaKnown RBP9.83□□□□□ -0.84
CDC33YOL139C MRPL32P25348 183 aa9.51□□□□□ -0.89
CDC33YOL139C YGL015CP33199 130 aa9.37□□□□□ -0.91
CDC33YOL139C DIP2Q12220 943 aaPredicted RBP9.33□□□□□ -0.92
CDC33YOL139C RSE1Q04693 1361 aaKnown RBP9.25□□□□□ -0.93
CDC33YOL139C REB1P21538 810 aa9.04□□□□□ -0.96
CDC33YOL139C RPL17AP05740 184 aaKnown RBP8.99□□□□□ -0.97
CDC33YOL139C RPL17BP46990 184 aaKnown RBP8.99□□□□□ -0.97
CDC33YOL139C BUD31P25337 157 aaPredicted RBP8.93□□□□□ -0.98
CDC33YOL139C CDC27P38042 758 aa8.83□□□□□ -1
CDC33YOL139C AVT3P36062 692 aa8.77□□□□□ -1.01
CDC33YOL139C UBP10P53874 792 aaPredicted RBP8.77□□□□□ -1.01
CDC33YOL139C MAP2P38174 421 aaKnown RBP8.67□□□□□ -1.02
CDC33YOL139C YKR023WP36119 530 aaKnown RBP8.64□□□□□ -1.03
CDC33YOL139C BFR2Q06631 534 aaKnown RBP8.58□□□□□ -1.04
CDC33YOL139C SPT21P35209 758 aa8.55□□□□□ -1.04
CDC33YOL139C TFC8Q12308 588 aa8.47□□□□□ -1.05
CDC33YOL139C HOP09932 586 aa8.43□□□□□ -1.06
CDC33YOL139C TIF4632P39936 914 aaKnown RBP8.42□□□□□ -1.06
CDC33YOL139C SIS1P25294 352 aaKnown RBP8.41□□□□□ -1.06
CDC33YOL139C TGL3P40308 642 aa8.41□□□□□ -1.06
CDC33YOL139C UBP9P39967 754 aa8.4□□□□□ -1.06
CDC33YOL139C DCD1P06773 312 aa8.39□□□□□ -1.07
CDC33YOL139C SCY1P53009 804 aa8.35□□□□□ -1.07
CDC33YOL139C SLX5P32828 619 aaKnown RBP8.33□□□□□ -1.08
CDC33YOL139C BCH2P36122 765 aa8.16□□□□□ -1.1
CDC33YOL139C RIM101P33400 625 aa8.11□□□□□ -1.11
CDC33YOL139C MST1P07236 462 aa7.97□□□□□ -1.13
CDC33YOL139C BDF1P35817 686 aa7.89□□□□□ -1.15
CDC33YOL139C EPS1P40557 701 aa7.89□□□□□ -1.15
CDC33YOL139C YBL029C-AQ3E756 94 aa7.89□□□□□ -1.15
CDC33YOL139C YOR238WQ08634 303 aa7.88□□□□□ -1.15
CDC33YOL139C NSR1P27476 414 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
CDC33YOL139C VNX1P42839 908 aa7.81□□□□□ -1.16
CDC33YOL139C OXP1P28273 1286 aa7.77□□□□□ -1.17
CDC33YOL139C TFA1P36100 482 aa7.74□□□□□ -1.17
CDC33YOL139C SPP1Q03012 353 aa7.73□□□□□ -1.17
CDC33YOL139C YIL055CP40523 627 aaKnown RBP7.7□□□□□ -1.18
CDC33YOL139C YAP5P40574 245 aa7.7□□□□□ -1.18
CDC33YOL139C PTP3P40048 928 aa7.68□□□□□ -1.18
CDC33YOL139C YJL171CP46992 396 aa7.65□□□□□ -1.18
CDC33YOL139C BBC1P47068 1157 aa7.65□□□□□ -1.18
CDC33YOL139C AIR2Q12476 344 aaKnown RBP7.65□□□□□ -1.18
CDC33YOL139C WSC3Q12215 556 aa7.63□□□□□ -1.19
CDC33YOL139C TIF11P38912 153 aaKnown RBP7.62□□□□□ -1.19
CDC33YOL139C FKH1P40466 484 aa7.62□□□□□ -1.19
CDC33YOL139C RSM7P47150 247 aa7.58□□□□□ -1.2
CDC33YOL139C AI2P03876 854 aa7.56□□□□□ -1.2
CDC33YOL139C GTT3P39996 337 aa7.55□□□□□ -1.2
CDC33YOL139C BMT6Q12291 365 aa7.48□□□□□ -1.21
CDC33YOL139C LDB19Q12502 818 aa7.48□□□□□ -1.21
CDC33YOL139C ULI1P43604 169 aa7.47□□□□□ -1.21
CDC33YOL139C IOC2Q12072 812 aa7.47□□□□□ -1.21
CDC33YOL139C YAH1Q12184 172 aaKnown RBP7.4□□□□□ -1.22
CDC33YOL139C MSB4Q12317 492 aa7.38□□□□□ -1.23
CDC33YOL139C EAP1P36041 632 aaKnown RBP7.37□□□□□ -1.23
CDC33YOL139C PIB1Q06651 286 aa7.32□□□□□ -1.24
CDC33YOL139C RTG1P32607 177 aa7.29□□□□□ -1.24
CDC33YOL139C PSD2P53037 1138 aaKnown RBP7.28□□□□□ -1.24
CDC33YOL139C YLR271WQ06152 274 aa7.28□□□□□ -1.24
CDC33YOL139C NCR1Q12200 1170 aa7.28□□□□□ -1.24
CDC33YOL139C TRP5P00931 707 aaKnown RBP7.25□□□□□ -1.25
CDC33YOL139C SEC61P32915 480 aa7.24□□□□□ -1.25
CDC33YOL139C YOL036WQ08206 761 aa7.24□□□□□ -1.25
CDC33YOL139C MRM1P25270 412 aa7.23□□□□□ -1.25
CDC33YOL139C SET4P42948 560 aa7.23□□□□□ -1.25
CDC33YOL139C YNL035CP53962 389 aaKnown RBP7.23□□□□□ -1.25
CDC33YOL139C YMR1P47147 688 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
CDC33YOL139C TFG1P41895 735 aaPredicted RBP7.15□□□□□ -1.26
CDC33YOL139C DBP1P24784 617 aaKnown RBP7.13□□□□□ -1.27
CDC33YOL139C SAM3Q08986 587 aa7.13□□□□□ -1.27
CDC33YOL139C SSP1P38871 571 aa7.12□□□□□ -1.27
CDC33YOL139C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
CDC33YOL139C VMA1P17255 1071 aaKnown RBP7.11□□□□□ -1.27
CDC33YOL139C BCK2P33306 851 aa7.11□□□□□ -1.27
CDC33YOL139C VPS29P38759 282 aa7.1□□□□□ -1.27
CDC33YOL139C JIP4Q03361 876 aa7.08□□□□□ -1.28
CDC33YOL139C CHL1P22516 861 aaPredicted RBP7.07□□□□□ -1.28
CDC33YOL139C RTG3P38165 486 aa7.07□□□□□ -1.28
CDC33YOL139C DAN4P47179 1161 aa7.07□□□□□ -1.28
CDC33YOL139C SAP30P38429 201 aa7.06□□□□□ -1.28
CDC33YOL139C YFR006WP43590 535 aa7.06□□□□□ -1.28
CDC33YOL139C ABP1P15891 592 aaKnown RBP7.05□□□□□ -1.28
CDC33YOL139C YDL129WQ07555 291 aa7.04□□□□□ -1.28
CDC33YOL139C STS1P38637 319 aa7.03□□□□□ -1.28
CDC33YOL139C PRE3P38624 215 aa7.02□□□□□ -1.29
CDC33YOL139C MGA2P40578 1113 aa6.98□□□□□ -1.29
CDC33YOL139C GYP5Q12344 894 aa6.97□□□□□ -1.29
CDC33YOL139C HTA1P04911 132 aaKnown RBP6.96□□□□□ -1.3
CDC33YOL139C HTA2P04912 132 aa6.96□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms