RNA–Protein interactions for RNA: YBR148W

YSW1, Transcript of Protein required for normal prospore membrane formation, yeastyeast

Gene YSW1, Length 1,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSW1YBR148W MTC1P47018 478 aaKnown RBP9.58□□□□□ -0.88
YSW1YBR148W FAP1P53971 965 aa9.56□□□□□ -0.88
YSW1YBR148W DRS1P32892 752 aaKnown RBP9.21□□□□□ -0.94
YSW1YBR148W PRY3P47033 881 aa9.05□□□□□ -0.96
YSW1YBR148W YCK3P39962 524 aa8.64□□□□□ -1.03
YSW1YBR148W AAD16Q02895 342 aa8.61□□□□□ -1.03
YSW1YBR148W PRI1P10363 409 aa8.57□□□□□ -1.04
YSW1YBR148W HAA1Q12753 694 aaKnown RBP8.42□□□□□ -1.06
YSW1YBR148W ISW2Q08773 1120 aa8.08□□□□□ -1.12
YSW1YBR148W RPG1P38249 964 aaKnown RBP8.06□□□□□ -1.12
YSW1YBR148W TSR3Q12094 313 aaKnown RBP8.06□□□□□ -1.12
YSW1YBR148W DIP2Q12220 943 aaPredicted RBP7.96□□□□□ -1.14
YSW1YBR148W AVT3P36062 692 aa7.82□□□□□ -1.16
YSW1YBR148W BFR2Q06631 534 aaKnown RBP7.8□□□□□ -1.16
YSW1YBR148W MRPL32P25348 183 aa7.69□□□□□ -1.18
YSW1YBR148W YGL015CP33199 130 aa7.62□□□□□ -1.19
YSW1YBR148W RSE1Q04693 1361 aaKnown RBP7.53□□□□□ -1.2
YSW1YBR148W BUD31P25337 157 aaPredicted RBP7.41□□□□□ -1.22
YSW1YBR148W RPL17AP05740 184 aaKnown RBP7.31□□□□□ -1.24
YSW1YBR148W RPL17BP46990 184 aaKnown RBP7.31□□□□□ -1.24
YSW1YBR148W CDC27P38042 758 aa7.24□□□□□ -1.25
YSW1YBR148W REB1P21538 810 aa7.21□□□□□ -1.26
YSW1YBR148W TFA1P36100 482 aa7.19□□□□□ -1.26
YSW1YBR148W SPT21P35209 758 aa7.09□□□□□ -1.27
YSW1YBR148W MAP2P38174 421 aaKnown RBP7.09□□□□□ -1.27
YSW1YBR148W UBP10P53874 792 aaPredicted RBP7.08□□□□□ -1.28
YSW1YBR148W YKR023WP36119 530 aaKnown RBP7.01□□□□□ -1.29
YSW1YBR148W SIS1P25294 352 aaKnown RBP6.93□□□□□ -1.3
YSW1YBR148W RIM101P33400 625 aa6.91□□□□□ -1.3
YSW1YBR148W DCD1P06773 312 aa6.86□□□□□ -1.31
YSW1YBR148W HOP09932 586 aa6.85□□□□□ -1.31
YSW1YBR148W TFC8Q12308 588 aa6.83□□□□□ -1.32
YSW1YBR148W UBP9P39967 754 aa6.78□□□□□ -1.32
YSW1YBR148W TGL3P40308 642 aa6.78□□□□□ -1.32
YSW1YBR148W SCY1P53009 804 aa6.78□□□□□ -1.32
YSW1YBR148W TIF4632P39936 914 aaKnown RBP6.76□□□□□ -1.33
YSW1YBR148W OXP1P28273 1286 aa6.74□□□□□ -1.33
YSW1YBR148W SLX5P32828 619 aaKnown RBP6.71□□□□□ -1.34
YSW1YBR148W BCH2P36122 765 aa6.59□□□□□ -1.35
YSW1YBR148W YAH1Q12184 172 aaKnown RBP6.51□□□□□ -1.37
YSW1YBR148W PTP3P40048 928 aa6.48□□□□□ -1.37
YSW1YBR148W YIL055CP40523 627 aaKnown RBP6.48□□□□□ -1.37
YSW1YBR148W YLR271WQ06152 274 aa6.48□□□□□ -1.37
YSW1YBR148W YBL029C-AQ3E756 94 aa6.46□□□□□ -1.38
YSW1YBR148W RSM7P47150 247 aa6.44□□□□□ -1.38
YSW1YBR148W MST1P07236 462 aa6.42□□□□□ -1.38
YSW1YBR148W SSP1P38871 571 aa6.41□□□□□ -1.38
YSW1YBR148W EPS1P40557 701 aa6.4□□□□□ -1.38
YSW1YBR148W BDF1P35817 686 aa6.39□□□□□ -1.39
YSW1YBR148W AI2P03876 854 aa6.36□□□□□ -1.39
YSW1YBR148W VNX1P42839 908 aa6.34□□□□□ -1.4
YSW1YBR148W PSD2P53037 1138 aaKnown RBP6.32□□□□□ -1.4
YSW1YBR148W YOR238WQ08634 303 aa6.31□□□□□ -1.4
YSW1YBR148W CST9Q06032 482 aa6.28□□□□□ -1.4
YSW1YBR148W AIR2Q12476 344 aaKnown RBP6.26□□□□□ -1.41
YSW1YBR148W SPP1Q03012 353 aa6.25□□□□□ -1.41
YSW1YBR148W BBC1P47068 1157 aa6.25□□□□□ -1.41
YSW1YBR148W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
YSW1YBR148W NSR1P27476 414 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
YSW1YBR148W FKH1P40466 484 aa6.21□□□□□ -1.42
YSW1YBR148W WSC3Q12215 556 aa6.21□□□□□ -1.42
YSW1YBR148W MGA2P40578 1113 aa6.2□□□□□ -1.42
YSW1YBR148W MRM1P25270 412 aa6.17□□□□□ -1.42
YSW1YBR148W YJL171CP46992 396 aa6.16□□□□□ -1.42
YSW1YBR148W YAP5P40574 245 aa6.15□□□□□ -1.43
YSW1YBR148W TIF11P38912 153 aaKnown RBP6.14□□□□□ -1.43
YSW1YBR148W RCR1P38212 213 aa6.13□□□□□ -1.43
YSW1YBR148W VPS29P38759 282 aa6.07□□□□□ -1.44
YSW1YBR148W LDB19Q12502 818 aa6.06□□□□□ -1.44
YSW1YBR148W IOC2Q12072 812 aa6.04□□□□□ -1.44
YSW1YBR148W BMT6Q12291 365 aa6.04□□□□□ -1.44
YSW1YBR148W RTG3P38165 486 aa6.02□□□□□ -1.45
YSW1YBR148W GTT3P39996 337 aa6.02□□□□□ -1.45
YSW1YBR148W ULI1P43604 169 aa6.01□□□□□ -1.45
YSW1YBR148W RAM2P29703 316 aa5.99□□□□□ -1.45
YSW1YBR148W PIB1Q06651 286 aa5.99□□□□□ -1.45
YSW1YBR148W STS1P38637 319 aa5.99□□□□□ -1.45
YSW1YBR148W YFR006WP43590 535 aa5.97□□□□□ -1.45
YSW1YBR148W DBP1P24784 617 aaKnown RBP5.95□□□□□ -1.46
YSW1YBR148W YMR1P47147 688 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
YSW1YBR148W RTG1P32607 177 aa5.88□□□□□ -1.47
YSW1YBR148W MSB4Q12317 492 aa5.85□□□□□ -1.47
YSW1YBR148W VMA1P17255 1071 aaKnown RBP5.85□□□□□ -1.47
YSW1YBR148W MAK11P20484 414 aaKnown RBP5.85□□□□□ -1.47
YSW1YBR148W EDS1P38073 919 aa5.84□□□□□ -1.47
YSW1YBR148W NCR1Q12200 1170 aa5.83□□□□□ -1.48
YSW1YBR148W TRP5P00931 707 aaKnown RBP5.83□□□□□ -1.48
YSW1YBR148W EAP1P36041 632 aaKnown RBP5.83□□□□□ -1.48
YSW1YBR148W DMA1P38823 416 aa5.83□□□□□ -1.48
YSW1YBR148W YOL036WQ08206 761 aa5.81□□□□□ -1.48
YSW1YBR148W SET4P42948 560 aa5.81□□□□□ -1.48
YSW1YBR148W COQ8P27697 501 aa5.8□□□□□ -1.48
YSW1YBR148W SAM3Q08986 587 aa5.79□□□□□ -1.48
YSW1YBR148W MIF2P35201 549 aa5.77□□□□□ -1.49
YSW1YBR148W YNL035CP53962 389 aaKnown RBP5.77□□□□□ -1.49
YSW1YBR148W SEC61P32915 480 aa5.76□□□□□ -1.49
YSW1YBR148W PTC3P34221 468 aaKnown RBP5.75□□□□□ -1.49
YSW1YBR148W SET1P38827 1080 aaKnown RBP5.74□□□□□ -1.49
YSW1YBR148W BCK2P33306 851 aa5.73□□□□□ -1.49
YSW1YBR148W SOL3P38858 249 aa5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms