RNA–Protein interactions for RNA: YOR127W

RGA1, Transcript of GTPase-activating protein for polarity-establishment protein Cdc42p, yeastyeast

Gene RGA1, Length 3,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGA1YOR127W MTC1P47018 478 aaKnown RBP4.95□□□□□ -1.62
RGA1YOR127W FAP1P53971 965 aa4.79□□□□□ -1.64
RGA1YOR127W DRS1P32892 752 aaKnown RBP4.63□□□□□ -1.67
RGA1YOR127W PRY3P47033 881 aa4.43□□□□□ -1.7
RGA1YOR127W AAD16Q02895 342 aa4.26□□□□□ -1.73
RGA1YOR127W ISW2Q08773 1120 aa4.21□□□□□ -1.74
RGA1YOR127W PRI1P10363 409 aa4.17□□□□□ -1.74
RGA1YOR127W RPG1P38249 964 aaKnown RBP4.12□□□□□ -1.75
RGA1YOR127W HAA1Q12753 694 aaKnown RBP4.08□□□□□ -1.76
RGA1YOR127W DIP2Q12220 943 aaPredicted RBP4.04□□□□□ -1.76
RGA1YOR127W TSR3Q12094 313 aaKnown RBP4.03□□□□□ -1.77
RGA1YOR127W RSE1Q04693 1361 aaKnown RBP3.98□□□□□ -1.77
RGA1YOR127W MON2P48563 1636 aaPredicted RBP3.97□□□□□ -1.77
RGA1YOR127W MRPL32P25348 183 aa3.95□□□□□ -1.78
RGA1YOR127W REB1P21538 810 aa3.9□□□□□ -1.78
RGA1YOR127W RPL17AP05740 184 aaKnown RBP3.87□□□□□ -1.79
RGA1YOR127W RPL17BP46990 184 aaKnown RBP3.87□□□□□ -1.79
RGA1YOR127W BFR2Q06631 534 aaKnown RBP3.85□□□□□ -1.79
RGA1YOR127W YCK3P39962 524 aa3.84□□□□□ -1.79
RGA1YOR127W YGL015CP33199 130 aa3.75□□□□□ -1.81
RGA1YOR127W AVT3P36062 692 aa3.75□□□□□ -1.81
RGA1YOR127W RQC2Q12532 1038 aaKnown RBP3.7□□□□□ -1.82
RGA1YOR127W KOG1P38873 1557 aa3.58□□□□□ -1.84
RGA1YOR127W TAF7Q05021 590 aa3.58□□□□□ -1.84
RGA1YOR127W CDC27P38042 758 aa3.57□□□□□ -1.84
RGA1YOR127W INO80P53115 1489 aa3.55□□□□□ -1.84
RGA1YOR127W UBP10P53874 792 aaPredicted RBP3.54□□□□□ -1.84
RGA1YOR127W HOP09932 586 aa3.54□□□□□ -1.84
RGA1YOR127W SPT21P35209 758 aa3.52□□□□□ -1.85
RGA1YOR127W MAP2P38174 421 aaKnown RBP3.52□□□□□ -1.85
RGA1YOR127W YKR023WP36119 530 aaKnown RBP3.51□□□□□ -1.85
RGA1YOR127W TIF4632P39936 914 aaKnown RBP3.49□□□□□ -1.85
RGA1YOR127W DCD1P06773 312 aa3.49□□□□□ -1.85
RGA1YOR127W DNA2P38859 1522 aa3.48□□□□□ -1.85
RGA1YOR127W SCY1P53009 804 aa3.48□□□□□ -1.85
RGA1YOR127W TFC8Q12308 588 aa3.48□□□□□ -1.85
RGA1YOR127W SLX5P32828 619 aaKnown RBP3.46□□□□□ -1.85
RGA1YOR127W UBP9P39967 754 aa3.46□□□□□ -1.85
RGA1YOR127W SWR1Q05471 1514 aa3.46□□□□□ -1.85
RGA1YOR127W SIS1P25294 352 aaKnown RBP3.46□□□□□ -1.86
RGA1YOR127W SPA2P23201 1466 aaKnown RBP3.44□□□□□ -1.86
RGA1YOR127W YIL055CP40523 627 aaKnown RBP3.44□□□□□ -1.86
RGA1YOR127W TY1B-DR4Q07793 1604 aa3.42□□□□□ -1.86
RGA1YOR127W PTP3P40048 928 aa3.41□□□□□ -1.86
RGA1YOR127W RIM101P33400 625 aa3.41□□□□□ -1.86
RGA1YOR127W BUD31P25337 157 aaPredicted RBP3.39□□□□□ -1.87
RGA1YOR127W BCH2P36122 765 aa3.36□□□□□ -1.87
RGA1YOR127W TGL3P40308 642 aa3.36□□□□□ -1.87
RGA1YOR127W TFA1P36100 482 aa3.36□□□□□ -1.87
RGA1YOR127W YAH1Q12184 172 aaKnown RBP3.35□□□□□ -1.87
RGA1YOR127W BBC1P47068 1157 aa3.34□□□□□ -1.87
RGA1YOR127W TCB3Q03640 1545 aaKnown RBP3.32□□□□□ -1.88
RGA1YOR127W GTT3P39996 337 aa3.32□□□□□ -1.88
RGA1YOR127W URN1Q06525 465 aaKnown RBP3.32□□□□□ -1.88
RGA1YOR127W EPS1P40557 701 aa3.31□□□□□ -1.88
RGA1YOR127W RSM7P47150 247 aa3.29□□□□□ -1.88
RGA1YOR127W OXP1P28273 1286 aa3.28□□□□□ -1.88
RGA1YOR127W YOR238WQ08634 303 aa3.27□□□□□ -1.89
RGA1YOR127W BDF1P35817 686 aa3.27□□□□□ -1.89
RGA1YOR127W THO2P53552 1597 aaKnown RBP3.27□□□□□ -1.89
RGA1YOR127W YJL171CP46992 396 aa3.25□□□□□ -1.89
RGA1YOR127W AI2P03876 854 aa3.25□□□□□ -1.89
RGA1YOR127W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
RGA1YOR127W WSC3Q12215 556 aa3.23□□□□□ -1.89
RGA1YOR127W YAP5P40574 245 aa3.22□□□□□ -1.89
RGA1YOR127W MIF2P35201 549 aa3.22□□□□□ -1.89
RGA1YOR127W SPP1Q03012 353 aa3.19□□□□□ -1.9
RGA1YOR127W PEP1P32319 1579 aa3.19□□□□□ -1.9
RGA1YOR127W YBL029C-AQ3E756 94 aa3.19□□□□□ -1.9
RGA1YOR127W REV3P14284 1504 aa3.18□□□□□ -1.9
RGA1YOR127W SSK2P53599 1579 aa3.18□□□□□ -1.9
RGA1YOR127W MYO2P19524 1574 aaKnown RBP3.17□□□□□ -1.9
RGA1YOR127W SSP1P38871 571 aa3.17□□□□□ -1.9
RGA1YOR127W TFG1P41895 735 aaPredicted RBP3.16□□□□□ -1.9
RGA1YOR127W PIB1Q06651 286 aa3.16□□□□□ -1.9
RGA1YOR127W MRM1P25270 412 aa3.15□□□□□ -1.91
RGA1YOR127W AIM44Q99299 758 aa3.15□□□□□ -1.91
RGA1YOR127W VNX1P42839 908 aa3.14□□□□□ -1.91
RGA1YOR127W YLR271WQ06152 274 aa3.14□□□□□ -1.91
RGA1YOR127W NSR1P27476 414 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
RGA1YOR127W DNF1P32660 1571 aa3.13□□□□□ -1.91
RGA1YOR127W IRC20Q06554 1556 aa3.13□□□□□ -1.91
RGA1YOR127W MST1P07236 462 aa3.12□□□□□ -1.91
RGA1YOR127W TIF11P38912 153 aaKnown RBP3.12□□□□□ -1.91
RGA1YOR127W ULI1P43604 169 aa3.11□□□□□ -1.91
RGA1YOR127W DMA1P38823 416 aa3.1□□□□□ -1.91
RGA1YOR127W EAP1P36041 632 aaKnown RBP3.09□□□□□ -1.92
RGA1YOR127W MDS3P53094 1487 aa3.08□□□□□ -1.92
RGA1YOR127W PSD2P53037 1138 aaKnown RBP3.08□□□□□ -1.92
RGA1YOR127W YRB30P53107 440 aaPredicted RBP3.08□□□□□ -1.92
RGA1YOR127W MGA2P40578 1113 aa3.07□□□□□ -1.92
RGA1YOR127W SET4P42948 560 aa3.07□□□□□ -1.92
RGA1YOR127W RTG3P38165 486 aa3.07□□□□□ -1.92
RGA1YOR127W YFR006WP43590 535 aa3.06□□□□□ -1.92
RGA1YOR127W DBP1P24784 617 aaKnown RBP3.06□□□□□ -1.92
RGA1YOR127W YMR1P47147 688 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
RGA1YOR127W LDB19Q12502 818 aa3.06□□□□□ -1.92
RGA1YOR127W BMT6Q12291 365 aa3.06□□□□□ -1.92
RGA1YOR127W MSB4Q12317 492 aa3.06□□□□□ -1.92
RGA1YOR127W ESC1Q03661 1658 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms