Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 SNU114YKL173W 3027 nt2.77□□□□□ -1.97
VPS27P40343 UTP22YGR090W 3714 nt2.77□□□□□ -1.97
VPS27P40343 CSF1YLR087C 8877 nt2.76□□□□□ -1.97
VPS27P40343 YDR114CYDR114C 303 nt2.76□□□□□ -1.97
VPS27P40343 NCE101YJL205C 162 nt2.76□□□□□ -1.97
VPS27P40343 YLR154W-FYLR154W-F 141 nt2.76□□□□□ -1.97
VPS27P40343 YMR153C-AYMR153C-A 336 nt2.76□□□□□ -1.97
VPS27P40343 SSY1YDR160W 2559 nt2.76□□□□□ -1.97
VPS27P40343 YPR097WYPR097W 3222 nt2.76□□□□□ -1.97
VPS27P40343 PRK1YIL095W 2433 nt2.76□□□□□ -1.97
VPS27P40343 YJL181WYJL181W 1836 nt2.75□□□□□ -1.97
VPS27P40343 YPK1YKL126W 2043 nt2.75□□□□□ -1.97
VPS27P40343 YDR194W-AYDR194W-A 153 nt2.75□□□□□ -1.97
VPS27P40343 GCN4YEL009C 846 nt2.75□□□□□ -1.97
VPS27P40343 YER006C-AYER006C-A 318 nt2.75□□□□□ -1.97
VPS27P40343 YER188C-AYER188C-A 300 nt2.75□□□□□ -1.97
VPS27P40343 NBL1YHR199C-A 222 nt2.75□□□□□ -1.97
VPS27P40343 tT(UGU)Q1tT(UGU)Q1 76 nt2.75□□□□□ -1.97
VPS27P40343 CCW14YLR390W-A 717 nt2.75□□□□□ -1.97
VPS27P40343 MSS18YPR134W 807 nt2.75□□□□□ -1.97
VPS27P40343 NUP82YJL061W 2142 nt2.74□□□□□ -1.97
VPS27P40343 VTC1YER072W 390 nt2.74□□□□□ -1.97
VPS27P40343 LCL2YLR104W 396 nt2.74□□□□□ -1.97
VPS27P40343 NUP170YBL079W 4509 nt2.74□□□□□ -1.97
VPS27P40343 ALK2YBL009W 2031 nt2.73□□□□□ -1.97
VPS27P40343 PES4YFR023W 1836 nt2.73□□□□□ -1.97
VPS27P40343 YDL068WYDL068W 330 nt2.73□□□□□ -1.97
VPS27P40343 YKL111CYKL111C 336 nt2.73□□□□□ -1.97
VPS27P40343 IRC19YLL033W 693 nt2.73□□□□□ -1.97
VPS27P40343 YLR154W-AYLR154W-A 186 nt2.73□□□□□ -1.97
VPS27P40343 NAN1YPL126W 2691 nt2.73□□□□□ -1.97
VPS27P40343 HMRA1YCR097W 381 nt2.72□□□□□ -1.97
VPS27P40343 YDR118W-AYDR118W-A 117 nt2.72□□□□□ -1.97
VPS27P40343 YER135CYER135C 393 nt2.72□□□□□ -1.97
VPS27P40343 RRF1YHR038W 693 nt2.72□□□□□ -1.97
VPS27P40343 YHR214W-AYHR214W-A 486 nt2.72□□□□□ -1.97
VPS27P40343 YAR068WYAR068W 486 nt2.72□□□□□ -1.97
VPS27P40343 DGR1YNL130C-A 147 nt2.72□□□□□ -1.97
VPS27P40343 snR13snR13 124 nt2.72□□□□□ -1.97
VPS27P40343 YPR039WYPR039W 336 nt2.72□□□□□ -1.97
VPS27P40343 RPS17AYML024W 411 nt2.71□□□□□ -1.98
VPS27P40343 TIF11YMR260C 462 nt2.71□□□□□ -1.98
VPS27P40343 FYV12YOR183W 390 nt2.71□□□□□ -1.98
VPS27P40343 YBR277CYBR277C 402 nt2.71□□□□□ -1.98
VPS27P40343 BTT1YDR252W 450 nt2.7□□□□□ -1.98
VPS27P40343 YGR025WYGR025W 303 nt2.7□□□□□ -1.98
VPS27P40343 LSM7YNL147W 348 nt2.7□□□□□ -1.98
VPS27P40343 TSC3YBR058C-A 243 nt2.7□□□□□ -1.98
VPS27P40343 ROX1YPR065W 1107 nt2.7□□□□□ -1.98
VPS27P40343 SWT1YOR166C 1377 nt2.7□□□□□ -1.98
VPS27P40343 BRE1YDL074C 2103 nt2.69□□□□□ -1.98
VPS27P40343 AFI1YOR129C 2682 nt2.69□□□□□ -1.98
VPS27P40343 CAJ1YER048C 1176 nt2.69□□□□□ -1.98
VPS27P40343 CRG1YHR209W 876 nt2.69□□□□□ -1.98
VPS27P40343 RPS22BYLR367W 393 nt2.69□□□□□ -1.98
VPS27P40343 YMR001C-AYMR001C-A 231 nt2.69□□□□□ -1.98
VPS27P40343 IPT1YDR072C 1584 nt2.69□□□□□ -1.98
VPS27P40343 YJL070CYJL070C 2667 nt2.68□□□□□ -1.98
VPS27P40343 ATP17YDR377W 306 nt2.68□□□□□ -1.98
VPS27P40343 RPS24AYER074W 408 nt2.68□□□□□ -1.98
VPS27P40343 IES5YER092W 378 nt2.68□□□□□ -1.98
VPS27P40343 YFR056CYFR056C 369 nt2.68□□□□□ -1.98
VPS27P40343 YBR032WYBR032W 303 nt2.68□□□□□ -1.98
VPS27P40343 ATP3YBR039W 936 nt2.68□□□□□ -1.98
VPS27P40343 LEE1YPL054W 906 nt2.68□□□□□ -1.98
VPS27P40343 YJL016WYJL016W 1686 nt2.68□□□□□ -1.98
VPS27P40343 MPH1YIR002C 2982 nt2.68□□□□□ -1.98
VPS27P40343 VPS52YDR484W 1926 nt2.68□□□□□ -1.98
VPS27P40343 SEC31YDL195W 3822 nt2.67□□□□□ -1.98
VPS27P40343 YER079WYER079W 633 nt2.67□□□□□ -1.98
VPS27P40343 CDC33YOL139C 642 nt2.67□□□□□ -1.98
VPS27P40343 REV1YOR346W 2958 nt2.67□□□□□ -1.98
VPS27P40343 UBR1YGR184C 5853 nt2.66□□□□□ -1.98
VPS27P40343 NAB6YML117W 3405 nt2.66□□□□□ -1.98
VPS27P40343 UBP11YKR098C 2154 nt2.66□□□□□ -1.98
VPS27P40343 YDL041WYDL041W 354 nt2.66□□□□□ -1.98
VPS27P40343 YDR157WYDR157W 402 nt2.66□□□□□ -1.98
VPS27P40343 SHE2YKL130C 741 nt2.66□□□□□ -1.98
VPS27P40343 ERP4YOR016C 624 nt2.66□□□□□ -1.98
VPS27P40343 MF(ALPHA)1YPL187W 498 nt2.66□□□□□ -1.98
VPS27P40343 DAD3YBR233W-A 285 nt2.66□□□□□ -1.98
VPS27P40343 RAV1YJR033C 4074 nt2.66□□□□□ -1.98
VPS27P40343 SPO23YBR250W 1572 nt2.66□□□□□ -1.98
VPS27P40343 PTC5YOR090C 1719 nt2.65□□□□□ -1.98
VPS27P40343 ATP6Q0085 780 nt2.65□□□□□ -1.99
VPS27P40343 YER068C-AYER068C-A 432 nt2.65□□□□□ -1.99
VPS27P40343 VOA1YGR106C 798 nt2.65□□□□□ -1.99
VPS27P40343 YHR138CYHR138C 345 nt2.65□□□□□ -1.99
VPS27P40343 YLR031WYLR031W 561 nt2.65□□□□□ -1.99
VPS27P40343 VTI1YMR197C 654 nt2.65□□□□□ -1.99
VPS27P40343 COX7YMR256C 183 nt2.65□□□□□ -1.99
VPS27P40343 YPR012WYPR012W 255 nt2.65□□□□□ -1.99
VPS27P40343 BRP1YGL007W 378 nt2.64□□□□□ -1.99
VPS27P40343 NFU1YKL040C 771 nt2.64□□□□□ -1.99
VPS27P40343 GRX8YLR364W 330 nt2.64□□□□□ -1.99
VPS27P40343 SPC72YAL047C 1869 nt2.64□□□□□ -1.99
VPS27P40343 NCL1YBL024W 2055 nt2.64□□□□□ -1.99
VPS27P40343 UBP2YOR124C 3819 nt2.63□□□□□ -1.99
VPS27P40343 MSL5YLR116W 1431 nt2.63□□□□□ -1.99
VPS27P40343 YDL025W-AYDL025W-A 105 nt2.63□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 88.9 ms