Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC00474Q9P2X8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00474Q9P2X8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00474Q9P2X8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00474Q9P2X8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00474Q9P2X8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC00474Q9P2X8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00474Q9P2X8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LINC00474Q9P2X8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00474Q9P2X8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00474Q9P2X8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LINC00474Q9P2X8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00474Q9P2X8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00474Q9P2X8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LINC00474Q9P2X8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00474Q9P2X8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00474Q9P2X8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00474Q9P2X8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00474Q9P2X8 AL135925.1-201ENST00000605920 1701 ntBASIC16.82■□□□□ 0.28
LINC00474Q9P2X8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00474Q9P2X8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.81■□□□□ 0.28
LINC00474Q9P2X8 AC108673.1-201ENST00000510422 1159 ntBASIC16.81■□□□□ 0.28
LINC00474Q9P2X8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.81■□□□□ 0.28
LINC00474Q9P2X8 AC044849.2-201ENST00000606596 710 ntBASIC16.81■□□□□ 0.28
LINC00474Q9P2X8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00474Q9P2X8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00474Q9P2X8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00474Q9P2X8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LINC00474Q9P2X8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00474Q9P2X8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00474Q9P2X8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00474Q9P2X8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00474Q9P2X8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00474Q9P2X8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LINC00474Q9P2X8 DUX4L28-201ENST00000623687 678 ntBASIC16.79■□□□□ 0.28
LINC00474Q9P2X8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00474Q9P2X8 AC010864.1-201ENST00000609407 1511 ntBASIC16.79■□□□□ 0.28
LINC00474Q9P2X8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00474Q9P2X8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00474Q9P2X8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00474Q9P2X8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00474Q9P2X8 AL162393.1-201ENST00000437852 946 ntBASIC16.78■□□□□ 0.28
LINC00474Q9P2X8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00474Q9P2X8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00474Q9P2X8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00474Q9P2X8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00474Q9P2X8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00474Q9P2X8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.77■□□□□ 0.28
LINC00474Q9P2X8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
LINC00474Q9P2X8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00474Q9P2X8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC00474Q9P2X8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
LINC00474Q9P2X8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC00474Q9P2X8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LINC00474Q9P2X8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00474Q9P2X8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00474Q9P2X8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00474Q9P2X8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.75■□□□□ 0.27
LINC00474Q9P2X8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LINC00474Q9P2X8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00474Q9P2X8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00474Q9P2X8 AC087741.3-201ENST00000624270 1347 ntBASIC16.74■□□□□ 0.27
LINC00474Q9P2X8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.74■□□□□ 0.27
LINC00474Q9P2X8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00474Q9P2X8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC16.74■□□□□ 0.27
LINC00474Q9P2X8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00474Q9P2X8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00474Q9P2X8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00474Q9P2X8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00474Q9P2X8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00474Q9P2X8 AC135731.1-201ENST00000569415 2548 ntBASIC16.73■□□□□ 0.27
LINC00474Q9P2X8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00474Q9P2X8 ST7-AS1-201ENST00000456775 1889 ntBASIC16.72■□□□□ 0.27
LINC00474Q9P2X8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00474Q9P2X8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00474Q9P2X8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC16.71■□□□□ 0.27
LINC00474Q9P2X8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC00474Q9P2X8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC16.71■□□□□ 0.27
LINC00474Q9P2X8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00474Q9P2X8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00474Q9P2X8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00474Q9P2X8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC00474Q9P2X8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.7■□□□□ 0.26
LINC00474Q9P2X8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00474Q9P2X8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00474Q9P2X8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.69■□□□□ 0.26
LINC00474Q9P2X8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00474Q9P2X8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00474Q9P2X8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
LINC00474Q9P2X8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00474Q9P2X8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00474Q9P2X8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00474Q9P2X8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00474Q9P2X8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC00474Q9P2X8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.67■□□□□ 0.26
LINC00474Q9P2X8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LINC00474Q9P2X8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00474Q9P2X8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00474Q9P2X8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC00474Q9P2X8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms