Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.85■■■□□ 2.53
ZFYVE28Q9HCC9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ZFYVE28Q9HCC9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ZFYVE28Q9HCC9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ZFYVE28Q9HCC9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.84■■■□□ 2.53
ZFYVE28Q9HCC9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ZFYVE28Q9HCC9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ZFYVE28Q9HCC9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
ZFYVE28Q9HCC9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.84■■■□□ 2.53
ZFYVE28Q9HCC9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
ZFYVE28Q9HCC9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
ZFYVE28Q9HCC9 ABHD17AP5-201ENST00000580133 923 ntBASIC30.83■■■□□ 2.53
ZFYVE28Q9HCC9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.82■■■□□ 2.52
ZFYVE28Q9HCC9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
ZFYVE28Q9HCC9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
ZFYVE28Q9HCC9 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.81■■■□□ 2.52
ZFYVE28Q9HCC9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.8■■■□□ 2.52
ZFYVE28Q9HCC9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
ZFYVE28Q9HCC9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.79■■■□□ 2.52
ZFYVE28Q9HCC9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ZFYVE28Q9HCC9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
ZFYVE28Q9HCC9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
ZFYVE28Q9HCC9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.76■■■□□ 2.52
ZFYVE28Q9HCC9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
ZFYVE28Q9HCC9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ZFYVE28Q9HCC9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
ZFYVE28Q9HCC9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
ZFYVE28Q9HCC9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
ZFYVE28Q9HCC9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ZFYVE28Q9HCC9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
ZFYVE28Q9HCC9 GPX1-201ENST00000419349 1106 ntBASIC30.72■■■□□ 2.51
ZFYVE28Q9HCC9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
ZFYVE28Q9HCC9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ZFYVE28Q9HCC9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ZFYVE28Q9HCC9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ZFYVE28Q9HCC9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.7■■■□□ 2.51
ZFYVE28Q9HCC9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
ZFYVE28Q9HCC9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
ZFYVE28Q9HCC9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ZFYVE28Q9HCC9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.68■■■□□ 2.5
ZFYVE28Q9HCC9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
ZFYVE28Q9HCC9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ZFYVE28Q9HCC9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.67■■■□□ 2.5
ZFYVE28Q9HCC9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.67■■■□□ 2.5
ZFYVE28Q9HCC9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.67■■■□□ 2.5
ZFYVE28Q9HCC9 RNF126P1-201ENST00000567452 1320 ntBASIC30.67■■■□□ 2.5
ZFYVE28Q9HCC9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ZFYVE28Q9HCC9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ZFYVE28Q9HCC9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ZFYVE28Q9HCC9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ZFYVE28Q9HCC9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.64■■■□□ 2.5
ZFYVE28Q9HCC9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.63■■■□□ 2.49
ZFYVE28Q9HCC9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.63■■■□□ 2.49
ZFYVE28Q9HCC9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.62■■■□□ 2.49
ZFYVE28Q9HCC9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
ZFYVE28Q9HCC9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
ZFYVE28Q9HCC9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ZFYVE28Q9HCC9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.59■■■□□ 2.49
ZFYVE28Q9HCC9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
ZFYVE28Q9HCC9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
ZFYVE28Q9HCC9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
ZFYVE28Q9HCC9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ZFYVE28Q9HCC9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.58■■■□□ 2.49
ZFYVE28Q9HCC9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.57■■■□□ 2.49
ZFYVE28Q9HCC9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
ZFYVE28Q9HCC9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.56■■■□□ 2.48
ZFYVE28Q9HCC9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.56■■■□□ 2.48
ZFYVE28Q9HCC9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
ZFYVE28Q9HCC9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
ZFYVE28Q9HCC9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.54■■■□□ 2.48
ZFYVE28Q9HCC9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ZFYVE28Q9HCC9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
ZFYVE28Q9HCC9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ZFYVE28Q9HCC9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
ZFYVE28Q9HCC9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.51■■■□□ 2.47
ZFYVE28Q9HCC9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
ZFYVE28Q9HCC9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.51■■■□□ 2.47
ZFYVE28Q9HCC9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
ZFYVE28Q9HCC9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.51■■■□□ 2.47
ZFYVE28Q9HCC9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
ZFYVE28Q9HCC9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
ZFYVE28Q9HCC9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
ZFYVE28Q9HCC9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
ZFYVE28Q9HCC9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
ZFYVE28Q9HCC9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.48■■■□□ 2.47
ZFYVE28Q9HCC9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.48■■■□□ 2.47
ZFYVE28Q9HCC9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.47■■■□□ 2.47
ZFYVE28Q9HCC9 NTF6A-201ENST00000591175 560 ntBASIC30.47■■■□□ 2.47
ZFYVE28Q9HCC9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.47■■■□□ 2.47
ZFYVE28Q9HCC9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
ZFYVE28Q9HCC9 AC012354.3-201ENST00000623734 483 ntBASIC30.45■■■□□ 2.47
ZFYVE28Q9HCC9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.45■■■□□ 2.46
ZFYVE28Q9HCC9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ZFYVE28Q9HCC9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
ZFYVE28Q9HCC9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
ZFYVE28Q9HCC9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
ZFYVE28Q9HCC9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
ZFYVE28Q9HCC9 AC022413.1-201ENST00000624602 984 ntBASIC30.41■■■□□ 2.46
ZFYVE28Q9HCC9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.41■■■□□ 2.46
ZFYVE28Q9HCC9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms