Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
CPNE1Q99829 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CPNE1Q99829 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CPNE1Q99829 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CPNE1Q99829 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CPNE1Q99829 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.24■■□□□ 1.79
CPNE1Q99829 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CPNE1Q99829 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CPNE1Q99829 SETD8P1-201ENST00000623146 1180 ntBASIC26.23■■□□□ 1.79
CPNE1Q99829 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CPNE1Q99829 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CPNE1Q99829 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CPNE1Q99829 AC142086.6-201ENST00000621154 1765 ntBASIC26.22■■□□□ 1.79
CPNE1Q99829 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CPNE1Q99829 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CPNE1Q99829 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
CPNE1Q99829 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
CPNE1Q99829 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.2■■□□□ 1.78
CPNE1Q99829 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.2■■□□□ 1.78
CPNE1Q99829 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.2■■□□□ 1.78
CPNE1Q99829 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CPNE1Q99829 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CPNE1Q99829 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.19■■□□□ 1.78
CPNE1Q99829 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.19■■□□□ 1.78
CPNE1Q99829 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CPNE1Q99829 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CPNE1Q99829 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.19■■□□□ 1.78
CPNE1Q99829 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CPNE1Q99829 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CPNE1Q99829 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CPNE1Q99829 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPNE1Q99829 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.16■■□□□ 1.78
CPNE1Q99829 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CPNE1Q99829 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPNE1Q99829 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
CPNE1Q99829 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPNE1Q99829 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPNE1Q99829 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPNE1Q99829 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CPNE1Q99829 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.15■■□□□ 1.78
CPNE1Q99829 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CPNE1Q99829 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CPNE1Q99829 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CPNE1Q99829 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.12■■□□□ 1.77
CPNE1Q99829 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
CPNE1Q99829 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CPNE1Q99829 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
CPNE1Q99829 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CPNE1Q99829 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.1■■□□□ 1.77
CPNE1Q99829 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.1■■□□□ 1.77
CPNE1Q99829 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CPNE1Q99829 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CPNE1Q99829 DRD5P2-201ENST00000421395 2012 ntBASIC26.09■■□□□ 1.77
CPNE1Q99829 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CPNE1Q99829 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.07■■□□□ 1.76
CPNE1Q99829 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CPNE1Q99829 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
CPNE1Q99829 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.06■■□□□ 1.76
CPNE1Q99829 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.06■■□□□ 1.76
CPNE1Q99829 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CPNE1Q99829 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.05■■□□□ 1.76
CPNE1Q99829 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CPNE1Q99829 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CPNE1Q99829 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CPNE1Q99829 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
CPNE1Q99829 AL391121.1-201ENST00000607967 1349 ntBASIC26.03■■□□□ 1.76
CPNE1Q99829 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CPNE1Q99829 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.02■■□□□ 1.76
CPNE1Q99829 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26■■□□□ 1.75
CPNE1Q99829 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26■■□□□ 1.75
CPNE1Q99829 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26■■□□□ 1.75
CPNE1Q99829 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.99■■□□□ 1.75
CPNE1Q99829 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CPNE1Q99829 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CPNE1Q99829 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
CPNE1Q99829 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CPNE1Q99829 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CPNE1Q99829 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CPNE1Q99829 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CPNE1Q99829 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CPNE1Q99829 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.95■■□□□ 1.75
CPNE1Q99829 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CPNE1Q99829 CAHM-201ENST00000604200 896 ntBASIC25.95■■□□□ 1.74
CPNE1Q99829 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CPNE1Q99829 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.95■■□□□ 1.74
CPNE1Q99829 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
CPNE1Q99829 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CPNE1Q99829 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CPNE1Q99829 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
CPNE1Q99829 AC136428.2-201ENST00000563187 214 ntBASIC25.93■■□□□ 1.74
CPNE1Q99829 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CPNE1Q99829 AP004833.2-201ENST00000532228 1454 ntBASIC25.92■■□□□ 1.74
CPNE1Q99829 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CPNE1Q99829 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CPNE1Q99829 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CPNE1Q99829 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
CPNE1Q99829 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CPNE1Q99829 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CPNE1Q99829 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.91■■□□□ 1.74
CPNE1Q99829 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms