Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
RTF1Q92541 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
RTF1Q92541 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
RTF1Q92541 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC34.63■■■■□ 3.13
RTF1Q92541 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC34.62■■■■□ 3.13
RTF1Q92541 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC34.61■■■■□ 3.13
RTF1Q92541 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
RTF1Q92541 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
RTF1Q92541 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
RTF1Q92541 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
RTF1Q92541 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC34.58■■■■□ 3.13
RTF1Q92541 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC34.57■■■■□ 3.12
RTF1Q92541 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
RTF1Q92541 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
RTF1Q92541 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
RTF1Q92541 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC34.53■■■■□ 3.12
RTF1Q92541 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
RTF1Q92541 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
RTF1Q92541 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
RTF1Q92541 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC34.51■■■■□ 3.12
RTF1Q92541 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC34.51■■■■□ 3.12
RTF1Q92541 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
RTF1Q92541 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
RTF1Q92541 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC34.5■■■■□ 3.11
RTF1Q92541 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC34.5■■■■□ 3.11
RTF1Q92541 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
RTF1Q92541 AC010864.1-201ENST00000609407 1511 ntBASIC34.49■■■■□ 3.11
RTF1Q92541 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
RTF1Q92541 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC34.48■■■■□ 3.11
RTF1Q92541 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC34.45■■■■□ 3.11
RTF1Q92541 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
RTF1Q92541 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
RTF1Q92541 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
RTF1Q92541 EI24-212ENST00000615917 1407 ntTSL 2 BASIC34.44■■■■□ 3.1
RTF1Q92541 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
RTF1Q92541 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
RTF1Q92541 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
RTF1Q92541 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC34.42■■■■□ 3.1
RTF1Q92541 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC34.41■■■■□ 3.1
RTF1Q92541 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
RTF1Q92541 HLA-V-202ENST00000446817 847 ntBASIC34.4■■■■□ 3.1
RTF1Q92541 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC34.39■■■■□ 3.1
RTF1Q92541 MBP-237ENST00000579129 1052 ntTSL 5 BASIC34.39■■■■□ 3.1
RTF1Q92541 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC34.38■■■■□ 3.09
RTF1Q92541 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
RTF1Q92541 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
RTF1Q92541 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC34.37■■■■□ 3.09
RTF1Q92541 LINC01971-201ENST00000617888 1048 ntBASIC34.37■■■■□ 3.09
RTF1Q92541 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
RTF1Q92541 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC34.34■■■■□ 3.09
RTF1Q92541 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC34.34■■■■□ 3.09
RTF1Q92541 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC34.33■■■■□ 3.09
RTF1Q92541 RNF166-209ENST00000567844 633 ntTSL 5 BASIC34.32■■■■□ 3.08
RTF1Q92541 DUX4L11-201ENST00000611504 1267 ntBASIC34.31■■■■□ 3.08
RTF1Q92541 DUX4L12-201ENST00000614593 1267 ntBASIC34.31■■■■□ 3.08
RTF1Q92541 DUX4L14-201ENST00000621227 1267 ntBASIC34.31■■■■□ 3.08
RTF1Q92541 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC34.31■■■■□ 3.08
RTF1Q92541 AL135925.1-201ENST00000605920 1701 ntBASIC34.3■■■■□ 3.08
RTF1Q92541 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC34.3■■■■□ 3.08
RTF1Q92541 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
RTF1Q92541 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
RTF1Q92541 MACF1-219ENST00000484793 834 ntTSL 2 BASIC34.28■■■■□ 3.08
RTF1Q92541 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC34.28■■■■□ 3.08
RTF1Q92541 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
RTF1Q92541 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC34.27■■■■□ 3.08
RTF1Q92541 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
RTF1Q92541 CALM3-209ENST00000597743 577 ntTSL 4 BASIC34.25■■■■□ 3.07
RTF1Q92541 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
RTF1Q92541 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC34.23■■■■□ 3.07
RTF1Q92541 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC34.23■■■■□ 3.07
RTF1Q92541 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
RTF1Q92541 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
RTF1Q92541 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
RTF1Q92541 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
RTF1Q92541 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC34.21■■■■□ 3.07
RTF1Q92541 AGPS-202ENST00000409888 815 ntTSL 4 BASIC34.21■■■■□ 3.07
RTF1Q92541 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC34.21■■■■□ 3.07
RTF1Q92541 MIR3648-2-201ENST00000581792 180 ntBASIC34.21■■■■□ 3.07
RTF1Q92541 MIR3648-1-201ENST00000615959 180 ntBASIC34.21■■■■□ 3.07
RTF1Q92541 GDI1-215ENST00000630693 786 ntTSL 4 BASIC34.21■■■■□ 3.07
RTF1Q92541 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC34.2■■■■□ 3.07
RTF1Q92541 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC34.2■■■■□ 3.06
RTF1Q92541 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
RTF1Q92541 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC34.19■■■■□ 3.06
RTF1Q92541 RPS2-202ENST00000526522 924 ntTSL 2 BASIC34.18■■■■□ 3.06
RTF1Q92541 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC34.18■■■■□ 3.06
RTF1Q92541 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC34.17■■■■□ 3.06
RTF1Q92541 AC016575.1-201ENST00000607026 382 ntBASIC34.17■■■■□ 3.06
RTF1Q92541 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
RTF1Q92541 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC34.16■■■■□ 3.06
RTF1Q92541 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
RTF1Q92541 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC34.16■■■■□ 3.06
RTF1Q92541 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC34.16■■■■□ 3.06
RTF1Q92541 LINC00273-201ENST00000539813 1452 ntBASIC34.15■■■■□ 3.06
RTF1Q92541 CR559946.2-201ENST00000623684 991 ntBASIC34.15■■■■□ 3.06
RTF1Q92541 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
RTF1Q92541 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC34.14■■■■□ 3.06
RTF1Q92541 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC34.14■■■■□ 3.06
RTF1Q92541 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC34.13■■■■□ 3.05
RTF1Q92541 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC34.13■■■■□ 3.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms