Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC40.23■■■■■ 4.03
ABCA6Q8N139 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC40.22■■■■■ 4.03
ABCA6Q8N139 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC40.2■■■■■ 4.03
ABCA6Q8N139 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC40.19■■■■■ 4.02
ABCA6Q8N139 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC40.19■■■■■ 4.02
ABCA6Q8N139 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC40.19■■■■■ 4.02
ABCA6Q8N139 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC40.18■■■■■ 4.02
ABCA6Q8N139 ABHD17AP5-201ENST00000580133 923 ntBASIC40.17■■■■■ 4.02
ABCA6Q8N139 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC40.17■■■■■ 4.02
ABCA6Q8N139 HES6-205ENST00000409356 528 ntTSL 2 BASIC40.16■■■■■ 4.02
ABCA6Q8N139 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
ABCA6Q8N139 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC40.15■■■■■ 4.02
ABCA6Q8N139 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC40.14■■■■■ 4.02
ABCA6Q8N139 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
ABCA6Q8N139 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC40.11■■■■■ 4.01
ABCA6Q8N139 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC40.11■■■■■ 4.01
ABCA6Q8N139 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC40.11■■■■■ 4.01
ABCA6Q8N139 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC40.1■■■■■ 4.01
ABCA6Q8N139 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC40.09■■■■■ 4.01
ABCA6Q8N139 CHML-204ENST00000638121 920 ntTSL 2 BASIC40.09■■■■■ 4.01
ABCA6Q8N139 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC40.09■■■■■ 4.01
ABCA6Q8N139 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC40.09■■■■■ 4.01
ABCA6Q8N139 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC40.08■■■■■ 4.01
ABCA6Q8N139 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC40.07■■■■■ 4.01
ABCA6Q8N139 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC40.07■■■■■ 4.01
ABCA6Q8N139 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC40.07■■■■■ 4.01
ABCA6Q8N139 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC40.07■■■■■ 4.01
ABCA6Q8N139 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC40.07■■■■■ 4.01
ABCA6Q8N139 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC40.07■■■■■ 4.01
ABCA6Q8N139 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC40.07■■■■■ 4.01
ABCA6Q8N139 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC40.07■■■■■ 4.01
ABCA6Q8N139 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC40.07■■■■■ 4.01
ABCA6Q8N139 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC40.07■■■■■ 4
ABCA6Q8N139 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC40.05■■■■■ 4
ABCA6Q8N139 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC40.03■■■■■ 4
ABCA6Q8N139 EI24-212ENST00000615917 1407 ntTSL 2 BASIC40.03■■■■■ 4
ABCA6Q8N139 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC40.01■■■■■ 4
ABCA6Q8N139 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC39.98■■■■□ 3.99
ABCA6Q8N139 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC39.98■■■■□ 3.99
ABCA6Q8N139 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC39.98■■■■□ 3.99
ABCA6Q8N139 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
ABCA6Q8N139 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC39.97■■■■□ 3.99
ABCA6Q8N139 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC39.97■■■■□ 3.99
ABCA6Q8N139 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
ABCA6Q8N139 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC39.97■■■■□ 3.99
ABCA6Q8N139 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC39.96■■■■□ 3.99
ABCA6Q8N139 GPX1-201ENST00000419349 1106 ntBASIC39.95■■■■□ 3.99
ABCA6Q8N139 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC39.95■■■■□ 3.99
ABCA6Q8N139 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC39.95■■■■□ 3.99
ABCA6Q8N139 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
ABCA6Q8N139 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC39.93■■■■□ 3.98
ABCA6Q8N139 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC39.91■■■■□ 3.98
ABCA6Q8N139 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC39.91■■■■□ 3.98
ABCA6Q8N139 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
ABCA6Q8N139 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
ABCA6Q8N139 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC39.89■■■■□ 3.98
ABCA6Q8N139 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC39.88■■■■□ 3.97
ABCA6Q8N139 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC39.87■■■■□ 3.97
ABCA6Q8N139 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC39.87■■■■□ 3.97
ABCA6Q8N139 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
ABCA6Q8N139 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC39.85■■■■□ 3.97
ABCA6Q8N139 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC39.84■■■■□ 3.97
ABCA6Q8N139 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC39.83■■■■□ 3.97
ABCA6Q8N139 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC39.81■■■■□ 3.96
ABCA6Q8N139 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC39.8■■■■□ 3.96
ABCA6Q8N139 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC39.8■■■■□ 3.96
ABCA6Q8N139 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC39.79■■■■□ 3.96
ABCA6Q8N139 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC39.78■■■■□ 3.96
ABCA6Q8N139 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC39.78■■■■□ 3.96
ABCA6Q8N139 CHST11-202ENST00000546689 756 ntTSL 2 BASIC39.78■■■■□ 3.96
ABCA6Q8N139 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
ABCA6Q8N139 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC39.77■■■■□ 3.96
ABCA6Q8N139 RNF126P1-201ENST00000567452 1320 ntBASIC39.77■■■■□ 3.96
ABCA6Q8N139 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC39.76■■■■□ 3.96
ABCA6Q8N139 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC39.76■■■■□ 3.95
ABCA6Q8N139 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC39.76■■■■□ 3.95
ABCA6Q8N139 TPT1-202ENST00000379055 948 ntTSL 2 BASIC39.73■■■■□ 3.95
ABCA6Q8N139 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
ABCA6Q8N139 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
ABCA6Q8N139 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC39.73■■■■□ 3.95
ABCA6Q8N139 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC39.73■■■■□ 3.95
ABCA6Q8N139 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC39.73■■■■□ 3.95
ABCA6Q8N139 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC39.72■■■■□ 3.95
ABCA6Q8N139 LINC00273-201ENST00000539813 1452 ntBASIC39.72■■■■□ 3.95
ABCA6Q8N139 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC39.7■■■■□ 3.95
ABCA6Q8N139 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC39.7■■■■□ 3.95
ABCA6Q8N139 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC39.69■■■■□ 3.94
ABCA6Q8N139 AC120057.4-201ENST00000624722 1615 ntBASIC39.67■■■■□ 3.94
ABCA6Q8N139 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC39.67■■■■□ 3.94
ABCA6Q8N139 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC39.65■■■■□ 3.94
ABCA6Q8N139 NTF6A-201ENST00000591175 560 ntBASIC39.65■■■■□ 3.94
ABCA6Q8N139 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC39.64■■■■□ 3.94
ABCA6Q8N139 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC39.63■■■■□ 3.93
ABCA6Q8N139 AC012354.3-201ENST00000623734 483 ntBASIC39.62■■■■□ 3.93
ABCA6Q8N139 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
ABCA6Q8N139 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
ABCA6Q8N139 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
ABCA6Q8N139 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC39.61■■■■□ 3.93
ABCA6Q8N139 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC39.6■■■■□ 3.93
ABCA6Q8N139 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC39.6■■■■□ 3.93
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms