Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.03■■□□□ 1.44
RP1L1Q8IWN7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RP1L1Q8IWN7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RP1L1Q8IWN7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RP1L1Q8IWN7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RP1L1Q8IWN7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.01■■□□□ 1.43
RP1L1Q8IWN7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
RP1L1Q8IWN7 ABHD17AP5-201ENST00000580133 923 ntBASIC24■■□□□ 1.43
RP1L1Q8IWN7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RP1L1Q8IWN7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RP1L1Q8IWN7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RP1L1Q8IWN7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RP1L1Q8IWN7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
RP1L1Q8IWN7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.99■■□□□ 1.43
RP1L1Q8IWN7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RP1L1Q8IWN7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
RP1L1Q8IWN7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.98■■□□□ 1.43
RP1L1Q8IWN7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RP1L1Q8IWN7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RP1L1Q8IWN7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RP1L1Q8IWN7 RNF126P1-201ENST00000567452 1320 ntBASIC23.95■■□□□ 1.42
RP1L1Q8IWN7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RP1L1Q8IWN7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RP1L1Q8IWN7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.94■■□□□ 1.42
RP1L1Q8IWN7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RP1L1Q8IWN7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RP1L1Q8IWN7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.92■■□□□ 1.42
RP1L1Q8IWN7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RP1L1Q8IWN7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RP1L1Q8IWN7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RP1L1Q8IWN7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.91■■□□□ 1.42
RP1L1Q8IWN7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RP1L1Q8IWN7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RP1L1Q8IWN7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
RP1L1Q8IWN7 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.89■■□□□ 1.41
RP1L1Q8IWN7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.88■■□□□ 1.41
RP1L1Q8IWN7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RP1L1Q8IWN7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RP1L1Q8IWN7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
RP1L1Q8IWN7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RP1L1Q8IWN7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.86■■□□□ 1.41
RP1L1Q8IWN7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.85■■□□□ 1.41
RP1L1Q8IWN7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
RP1L1Q8IWN7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RP1L1Q8IWN7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.84■■□□□ 1.41
RP1L1Q8IWN7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RP1L1Q8IWN7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RP1L1Q8IWN7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.83■■□□□ 1.41
RP1L1Q8IWN7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RP1L1Q8IWN7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
RP1L1Q8IWN7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RP1L1Q8IWN7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RP1L1Q8IWN7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC23.8■■□□□ 1.4
RP1L1Q8IWN7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RP1L1Q8IWN7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
RP1L1Q8IWN7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RP1L1Q8IWN7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RP1L1Q8IWN7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
RP1L1Q8IWN7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.78■■□□□ 1.4
RP1L1Q8IWN7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RP1L1Q8IWN7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
RP1L1Q8IWN7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RP1L1Q8IWN7 GPX1-201ENST00000419349 1106 ntBASIC23.76■■□□□ 1.39
RP1L1Q8IWN7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.76■■□□□ 1.39
RP1L1Q8IWN7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
RP1L1Q8IWN7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RP1L1Q8IWN7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RP1L1Q8IWN7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.75■■□□□ 1.39
RP1L1Q8IWN7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RP1L1Q8IWN7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.74■■□□□ 1.39
RP1L1Q8IWN7 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.74■■□□□ 1.39
RP1L1Q8IWN7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RP1L1Q8IWN7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.73■■□□□ 1.39
RP1L1Q8IWN7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.73■■□□□ 1.39
RP1L1Q8IWN7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RP1L1Q8IWN7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RP1L1Q8IWN7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.72■■□□□ 1.39
RP1L1Q8IWN7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.72■■□□□ 1.39
RP1L1Q8IWN7 NTF6A-201ENST00000591175 560 ntBASIC23.72■■□□□ 1.39
RP1L1Q8IWN7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RP1L1Q8IWN7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RP1L1Q8IWN7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RP1L1Q8IWN7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RP1L1Q8IWN7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RP1L1Q8IWN7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RP1L1Q8IWN7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RP1L1Q8IWN7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.7■■□□□ 1.38
RP1L1Q8IWN7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
RP1L1Q8IWN7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RP1L1Q8IWN7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
RP1L1Q8IWN7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RP1L1Q8IWN7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RP1L1Q8IWN7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
RP1L1Q8IWN7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RP1L1Q8IWN7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.67■■□□□ 1.38
RP1L1Q8IWN7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RP1L1Q8IWN7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RP1L1Q8IWN7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.67■■□□□ 1.38
RP1L1Q8IWN7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.67■■□□□ 1.38
RP1L1Q8IWN7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms