Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.81■■□□□ 1.72
SYVN1Q86TM6 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.81■■□□□ 1.72
SYVN1Q86TM6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SYVN1Q86TM6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SYVN1Q86TM6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SYVN1Q86TM6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SYVN1Q86TM6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
SYVN1Q86TM6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SYVN1Q86TM6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.79■■□□□ 1.72
SYVN1Q86TM6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
SYVN1Q86TM6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SYVN1Q86TM6 MIR762-201ENST00000390236 83 ntBASIC25.78■■□□□ 1.72
SYVN1Q86TM6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
SYVN1Q86TM6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
SYVN1Q86TM6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.78■■□□□ 1.72
SYVN1Q86TM6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
SYVN1Q86TM6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SYVN1Q86TM6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SYVN1Q86TM6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SYVN1Q86TM6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SYVN1Q86TM6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SYVN1Q86TM6 DUX4L28-201ENST00000623687 678 ntBASIC25.75■■□□□ 1.71
SYVN1Q86TM6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.75■■□□□ 1.71
SYVN1Q86TM6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.75■■□□□ 1.71
SYVN1Q86TM6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.74■■□□□ 1.71
SYVN1Q86TM6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
SYVN1Q86TM6 AC087741.3-201ENST00000624270 1347 ntBASIC25.73■■□□□ 1.71
SYVN1Q86TM6 AC005559.1-201ENST00000589661 871 ntBASIC25.73■■□□□ 1.71
SYVN1Q86TM6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SYVN1Q86TM6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SYVN1Q86TM6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
SYVN1Q86TM6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
SYVN1Q86TM6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.7■■□□□ 1.7
SYVN1Q86TM6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SYVN1Q86TM6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.69■■□□□ 1.7
SYVN1Q86TM6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SYVN1Q86TM6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SYVN1Q86TM6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.69■■□□□ 1.7
SYVN1Q86TM6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
SYVN1Q86TM6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SYVN1Q86TM6 AC044849.2-201ENST00000606596 710 ntBASIC25.68■■□□□ 1.7
SYVN1Q86TM6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.67■■□□□ 1.7
SYVN1Q86TM6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
SYVN1Q86TM6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.66■■□□□ 1.7
SYVN1Q86TM6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SYVN1Q86TM6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.65■■□□□ 1.7
SYVN1Q86TM6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SYVN1Q86TM6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
SYVN1Q86TM6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SYVN1Q86TM6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SYVN1Q86TM6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.61■■□□□ 1.69
SYVN1Q86TM6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.61■■□□□ 1.69
SYVN1Q86TM6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SYVN1Q86TM6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SYVN1Q86TM6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
SYVN1Q86TM6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
SYVN1Q86TM6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SYVN1Q86TM6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SYVN1Q86TM6 ABHD17AP4-201ENST00000411545 909 ntBASIC25.59■■□□□ 1.69
SYVN1Q86TM6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SYVN1Q86TM6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SYVN1Q86TM6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SYVN1Q86TM6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SYVN1Q86TM6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
SYVN1Q86TM6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SYVN1Q86TM6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
SYVN1Q86TM6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SYVN1Q86TM6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
SYVN1Q86TM6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SYVN1Q86TM6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SYVN1Q86TM6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SYVN1Q86TM6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
SYVN1Q86TM6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SYVN1Q86TM6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
SYVN1Q86TM6 MIR7108-201ENST00000614319 87 ntBASIC25.53■■□□□ 1.68
SYVN1Q86TM6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
SYVN1Q86TM6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.52■■□□□ 1.68
SYVN1Q86TM6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
SYVN1Q86TM6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.51■■□□□ 1.67
SYVN1Q86TM6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SYVN1Q86TM6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SYVN1Q86TM6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SYVN1Q86TM6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.5■■□□□ 1.67
SYVN1Q86TM6 AC010864.1-201ENST00000609407 1511 ntBASIC25.5■■□□□ 1.67
SYVN1Q86TM6 AL139393.2-201ENST00000608721 2025 ntBASIC25.49■■□□□ 1.67
SYVN1Q86TM6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SYVN1Q86TM6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SYVN1Q86TM6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SYVN1Q86TM6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SYVN1Q86TM6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SYVN1Q86TM6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SYVN1Q86TM6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SYVN1Q86TM6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.48■■□□□ 1.67
SYVN1Q86TM6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
SYVN1Q86TM6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SYVN1Q86TM6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SYVN1Q86TM6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
SYVN1Q86TM6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.47■■□□□ 1.67
SYVN1Q86TM6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SYVN1Q86TM6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms