Protein–RNA interactions for Protein: Q6X4T0

C12orf54, Uncharacterized protein C12orf54, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54Q6X4T0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
C12orf54Q6X4T0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C12orf54Q6X4T0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.09■□□□□ 0.97
C12orf54Q6X4T0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
C12orf54Q6X4T0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C12orf54Q6X4T0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
C12orf54Q6X4T0 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.06■□□□□ 0.96
C12orf54Q6X4T0 DUX4L13-201ENST00000554103 1267 ntBASIC21.06■□□□□ 0.96
C12orf54Q6X4T0 DUX4L15-201ENST00000611059 1267 ntBASIC21.06■□□□□ 0.96
C12orf54Q6X4T0 DUX4L23-201ENST00000615195 1269 ntBASIC21.06■□□□□ 0.96
C12orf54Q6X4T0 DUX4L24-201ENST00000617576 1269 ntBASIC21.06■□□□□ 0.96
C12orf54Q6X4T0 DUX4L22-201ENST00000618238 1269 ntBASIC21.06■□□□□ 0.96
C12orf54Q6X4T0 DUX4L20-201ENST00000619712 1269 ntBASIC21.06■□□□□ 0.96
C12orf54Q6X4T0 DUX4L21-201ENST00000622058 1269 ntBASIC21.06■□□□□ 0.96
C12orf54Q6X4T0 DUX4L10-201ENST00000622460 1267 ntBASIC21.06■□□□□ 0.96
C12orf54Q6X4T0 DUX4L25-201ENST00000624915 1269 ntBASIC21.06■□□□□ 0.96
C12orf54Q6X4T0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C12orf54Q6X4T0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
C12orf54Q6X4T0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C12orf54Q6X4T0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C12orf54Q6X4T0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C12orf54Q6X4T0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C12orf54Q6X4T0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C12orf54Q6X4T0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C12orf54Q6X4T0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
C12orf54Q6X4T0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
C12orf54Q6X4T0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
C12orf54Q6X4T0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C12orf54Q6X4T0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.04■□□□□ 0.96
C12orf54Q6X4T0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.04■□□□□ 0.96
C12orf54Q6X4T0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C12orf54Q6X4T0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C12orf54Q6X4T0 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C12orf54Q6X4T0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C12orf54Q6X4T0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
C12orf54Q6X4T0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.02■□□□□ 0.96
C12orf54Q6X4T0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
C12orf54Q6X4T0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C12orf54Q6X4T0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
C12orf54Q6X4T0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
C12orf54Q6X4T0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
C12orf54Q6X4T0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21■□□□□ 0.95
C12orf54Q6X4T0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21■□□□□ 0.95
C12orf54Q6X4T0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21■□□□□ 0.95
C12orf54Q6X4T0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C12orf54Q6X4T0 GPX1-201ENST00000419349 1106 ntBASIC20.99■□□□□ 0.95
C12orf54Q6X4T0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C12orf54Q6X4T0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
C12orf54Q6X4T0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.98■□□□□ 0.95
C12orf54Q6X4T0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.98■□□□□ 0.95
C12orf54Q6X4T0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C12orf54Q6X4T0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
C12orf54Q6X4T0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
C12orf54Q6X4T0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.97■□□□□ 0.95
C12orf54Q6X4T0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.97■□□□□ 0.95
C12orf54Q6X4T0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
C12orf54Q6X4T0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
C12orf54Q6X4T0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.96■□□□□ 0.95
C12orf54Q6X4T0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.96■□□□□ 0.95
C12orf54Q6X4T0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
C12orf54Q6X4T0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C12orf54Q6X4T0 RNF126P1-201ENST00000567452 1320 ntBASIC20.95■□□□□ 0.94
C12orf54Q6X4T0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
C12orf54Q6X4T0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C12orf54Q6X4T0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C12orf54Q6X4T0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
C12orf54Q6X4T0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
C12orf54Q6X4T0 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.94■□□□□ 0.94
C12orf54Q6X4T0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C12orf54Q6X4T0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.92■□□□□ 0.94
C12orf54Q6X4T0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C12orf54Q6X4T0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.91■□□□□ 0.94
C12orf54Q6X4T0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C12orf54Q6X4T0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C12orf54Q6X4T0 AC012354.3-201ENST00000623734 483 ntBASIC20.91■□□□□ 0.94
C12orf54Q6X4T0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
C12orf54Q6X4T0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
C12orf54Q6X4T0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C12orf54Q6X4T0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
C12orf54Q6X4T0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
C12orf54Q6X4T0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
C12orf54Q6X4T0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
C12orf54Q6X4T0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.89■□□□□ 0.93
C12orf54Q6X4T0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.89■□□□□ 0.93
C12orf54Q6X4T0 AC139426.1-201ENST00000568218 2529 ntBASIC20.88■□□□□ 0.93
C12orf54Q6X4T0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C12orf54Q6X4T0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C12orf54Q6X4T0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
C12orf54Q6X4T0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.87■□□□□ 0.93
C12orf54Q6X4T0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf54Q6X4T0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.86■□□□□ 0.93
C12orf54Q6X4T0 NTF6A-201ENST00000591175 560 ntBASIC20.86■□□□□ 0.93
C12orf54Q6X4T0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.86■□□□□ 0.93
C12orf54Q6X4T0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
C12orf54Q6X4T0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf54Q6X4T0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
C12orf54Q6X4T0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf54Q6X4T0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf54Q6X4T0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.84■□□□□ 0.93
C12orf54Q6X4T0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms