Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
FREM1Q5H8C1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.33■■□□□ 1.32
FREM1Q5H8C1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
FREM1Q5H8C1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.32■■□□□ 1.32
FREM1Q5H8C1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FREM1Q5H8C1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
FREM1Q5H8C1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.31■■□□□ 1.32
FREM1Q5H8C1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.31■■□□□ 1.32
FREM1Q5H8C1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.31■■□□□ 1.32
FREM1Q5H8C1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
FREM1Q5H8C1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
FREM1Q5H8C1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
FREM1Q5H8C1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
FREM1Q5H8C1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.3■■□□□ 1.32
FREM1Q5H8C1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
FREM1Q5H8C1 ABHD17AP4-201ENST00000411545 909 ntBASIC23.29■■□□□ 1.32
FREM1Q5H8C1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.28■■□□□ 1.32
FREM1Q5H8C1 MIR6090-201ENST00000622481 60 ntBASIC23.28■■□□□ 1.32
FREM1Q5H8C1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
FREM1Q5H8C1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.28■■□□□ 1.32
FREM1Q5H8C1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FREM1Q5H8C1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.27■■□□□ 1.32
FREM1Q5H8C1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.27■■□□□ 1.32
FREM1Q5H8C1 AL135925.1-201ENST00000605920 1701 ntBASIC23.27■■□□□ 1.32
FREM1Q5H8C1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
FREM1Q5H8C1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FREM1Q5H8C1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FREM1Q5H8C1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.25■■□□□ 1.31
FREM1Q5H8C1 AC010864.1-201ENST00000609407 1511 ntBASIC23.25■■□□□ 1.31
FREM1Q5H8C1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FREM1Q5H8C1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.25■■□□□ 1.31
FREM1Q5H8C1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.24■■□□□ 1.31
FREM1Q5H8C1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FREM1Q5H8C1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FREM1Q5H8C1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FREM1Q5H8C1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
FREM1Q5H8C1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.22■■□□□ 1.31
FREM1Q5H8C1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
FREM1Q5H8C1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
FREM1Q5H8C1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
FREM1Q5H8C1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.2■■□□□ 1.3
FREM1Q5H8C1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
FREM1Q5H8C1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FREM1Q5H8C1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
FREM1Q5H8C1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
FREM1Q5H8C1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
FREM1Q5H8C1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FREM1Q5H8C1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.19■■□□□ 1.3
FREM1Q5H8C1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FREM1Q5H8C1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
FREM1Q5H8C1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FREM1Q5H8C1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FREM1Q5H8C1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FREM1Q5H8C1 ABCB10P1-201ENST00000614297 2181 ntBASIC23.18■■□□□ 1.3
FREM1Q5H8C1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.17■■□□□ 1.3
FREM1Q5H8C1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FREM1Q5H8C1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FREM1Q5H8C1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FREM1Q5H8C1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
FREM1Q5H8C1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
FREM1Q5H8C1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FREM1Q5H8C1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.15■■□□□ 1.3
FREM1Q5H8C1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.15■■□□□ 1.3
FREM1Q5H8C1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FREM1Q5H8C1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FREM1Q5H8C1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
FREM1Q5H8C1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
FREM1Q5H8C1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.14■■□□□ 1.29
FREM1Q5H8C1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
FREM1Q5H8C1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.13■■□□□ 1.29
FREM1Q5H8C1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
FREM1Q5H8C1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.13■■□□□ 1.29
FREM1Q5H8C1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.13■■□□□ 1.29
FREM1Q5H8C1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FREM1Q5H8C1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FREM1Q5H8C1 MIR7108-201ENST00000614319 87 ntBASIC23.13■■□□□ 1.29
FREM1Q5H8C1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FREM1Q5H8C1 DUX4L29-201ENST00000425409 679 ntBASIC23.12■■□□□ 1.29
FREM1Q5H8C1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.12■■□□□ 1.29
FREM1Q5H8C1 AC021231.2-201ENST00000594613 730 ntBASIC23.11■■□□□ 1.29
FREM1Q5H8C1 ST7-AS1-201ENST00000456775 1889 ntBASIC23.11■■□□□ 1.29
FREM1Q5H8C1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
FREM1Q5H8C1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
FREM1Q5H8C1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.08■■□□□ 1.29
FREM1Q5H8C1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
FREM1Q5H8C1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
FREM1Q5H8C1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.07■■□□□ 1.28
FREM1Q5H8C1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
FREM1Q5H8C1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
FREM1Q5H8C1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
FREM1Q5H8C1 HLA-V-202ENST00000446817 847 ntBASIC23.05■■□□□ 1.28
FREM1Q5H8C1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.05■■□□□ 1.28
FREM1Q5H8C1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FREM1Q5H8C1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
FREM1Q5H8C1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
FREM1Q5H8C1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
FREM1Q5H8C1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.03■■□□□ 1.28
FREM1Q5H8C1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FREM1Q5H8C1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.03■■□□□ 1.28
FREM1Q5H8C1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms