Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ABCA4P78363 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.92■■□□□ 1.26
ABCA4P78363 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ABCA4P78363 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.91■■□□□ 1.26
ABCA4P78363 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.91■■□□□ 1.26
ABCA4P78363 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L13-201ENST00000554103 1267 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L15-201ENST00000611059 1267 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L23-201ENST00000615195 1269 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L24-201ENST00000617576 1269 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L22-201ENST00000618238 1269 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L20-201ENST00000619712 1269 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L21-201ENST00000622058 1269 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L10-201ENST00000622460 1267 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 DUX4L25-201ENST00000624915 1269 ntBASIC22.9■■□□□ 1.26
ABCA4P78363 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
ABCA4P78363 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
ABCA4P78363 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.89■■□□□ 1.26
ABCA4P78363 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
ABCA4P78363 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
ABCA4P78363 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ABCA4P78363 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ABCA4P78363 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
ABCA4P78363 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
ABCA4P78363 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
ABCA4P78363 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ABCA4P78363 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
ABCA4P78363 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.86■■□□□ 1.25
ABCA4P78363 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.86■■□□□ 1.25
ABCA4P78363 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA4P78363 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ABCA4P78363 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.85■■□□□ 1.25
ABCA4P78363 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.84■■□□□ 1.25
ABCA4P78363 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ABCA4P78363 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.84■■□□□ 1.25
ABCA4P78363 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ABCA4P78363 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ABCA4P78363 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ABCA4P78363 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
ABCA4P78363 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.8■■□□□ 1.24
ABCA4P78363 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.8■■□□□ 1.24
ABCA4P78363 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ABCA4P78363 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ABCA4P78363 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.78■■□□□ 1.24
ABCA4P78363 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.77■■□□□ 1.24
ABCA4P78363 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
ABCA4P78363 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ABCA4P78363 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.77■■□□□ 1.24
ABCA4P78363 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.77■■□□□ 1.23
ABCA4P78363 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.77■■□□□ 1.23
ABCA4P78363 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.77■■□□□ 1.23
ABCA4P78363 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.76■■□□□ 1.23
ABCA4P78363 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ABCA4P78363 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
ABCA4P78363 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ABCA4P78363 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.74■■□□□ 1.23
ABCA4P78363 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ABCA4P78363 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.74■■□□□ 1.23
ABCA4P78363 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.73■■□□□ 1.23
ABCA4P78363 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ABCA4P78363 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ABCA4P78363 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
ABCA4P78363 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.72■■□□□ 1.23
ABCA4P78363 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.71■■□□□ 1.23
ABCA4P78363 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ABCA4P78363 RARRES2P2-201ENST00000394842 485 ntBASIC22.71■■□□□ 1.23
ABCA4P78363 AC120057.4-201ENST00000624722 1615 ntBASIC22.71■■□□□ 1.23
ABCA4P78363 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
ABCA4P78363 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ABCA4P78363 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.68■■□□□ 1.22
ABCA4P78363 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ABCA4P78363 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ABCA4P78363 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
ABCA4P78363 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
ABCA4P78363 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.65■■□□□ 1.22
ABCA4P78363 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ABCA4P78363 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
ABCA4P78363 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ABCA4P78363 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ABCA4P78363 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ABCA4P78363 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.64■■□□□ 1.21
ABCA4P78363 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.63■■□□□ 1.21
ABCA4P78363 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ABCA4P78363 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ABCA4P78363 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.62■■□□□ 1.21
ABCA4P78363 ABHD17AP5-201ENST00000580133 923 ntBASIC22.61■■□□□ 1.21
ABCA4P78363 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ABCA4P78363 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC22.6■■□□□ 1.21
ABCA4P78363 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ABCA4P78363 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ABCA4P78363 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
ABCA4P78363 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.59■■□□□ 1.21
ABCA4P78363 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
ABCA4P78363 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ABCA4P78363 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ABCA4P78363 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ABCA4P78363 AL161658.1-201ENST00000623641 1967 ntBASIC22.57■■□□□ 1.2
ABCA4P78363 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ABCA4P78363 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.56■■□□□ 1.2
ABCA4P78363 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms