Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
GABREP78334 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
GABREP78334 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
GABREP78334 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.29■■□□□ 1.64
GABREP78334 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.29■■□□□ 1.64
GABREP78334 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
GABREP78334 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
GABREP78334 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.28■■□□□ 1.64
GABREP78334 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.27■■□□□ 1.64
GABREP78334 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
GABREP78334 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.26■■□□□ 1.63
GABREP78334 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
GABREP78334 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.26■■□□□ 1.63
GABREP78334 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
GABREP78334 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
GABREP78334 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.24■■□□□ 1.63
GABREP78334 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
GABREP78334 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.24■■□□□ 1.63
GABREP78334 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
GABREP78334 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.24■■□□□ 1.63
GABREP78334 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.23■■□□□ 1.63
GABREP78334 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
GABREP78334 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.22■■□□□ 1.63
GABREP78334 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.22■■□□□ 1.63
GABREP78334 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
GABREP78334 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.21■■□□□ 1.63
GABREP78334 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
GABREP78334 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.21■■□□□ 1.63
GABREP78334 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.21■■□□□ 1.63
GABREP78334 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.21■■□□□ 1.63
GABREP78334 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.2■■□□□ 1.62
GABREP78334 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
GABREP78334 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
GABREP78334 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
GABREP78334 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
GABREP78334 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
GABREP78334 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
GABREP78334 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
GABREP78334 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
GABREP78334 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
GABREP78334 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
GABREP78334 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
GABREP78334 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
GABREP78334 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
GABREP78334 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
GABREP78334 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
GABREP78334 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
GABREP78334 RARRES2P2-201ENST00000394842 485 ntBASIC25.14■■□□□ 1.62
GABREP78334 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.14■■□□□ 1.62
GABREP78334 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.13■■□□□ 1.61
GABREP78334 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.13■■□□□ 1.61
GABREP78334 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
GABREP78334 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
GABREP78334 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
GABREP78334 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
GABREP78334 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
GABREP78334 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
GABREP78334 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.11■■□□□ 1.61
GABREP78334 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
GABREP78334 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
GABREP78334 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.09■■□□□ 1.61
GABREP78334 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.09■■□□□ 1.61
GABREP78334 ABHD17AP5-201ENST00000580133 923 ntBASIC25.08■■□□□ 1.61
GABREP78334 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
GABREP78334 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.07■■□□□ 1.6
GABREP78334 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
GABREP78334 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
GABREP78334 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
GABREP78334 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
GABREP78334 GPX1-201ENST00000419349 1106 ntBASIC25.05■■□□□ 1.6
GABREP78334 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
GABREP78334 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
GABREP78334 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
GABREP78334 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
GABREP78334 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
GABREP78334 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.04■■□□□ 1.6
GABREP78334 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
GABREP78334 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.03■■□□□ 1.6
GABREP78334 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.03■■□□□ 1.6
GABREP78334 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
GABREP78334 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
GABREP78334 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
GABREP78334 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
GABREP78334 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
GABREP78334 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
GABREP78334 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25■■□□□ 1.59
GABREP78334 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25■■□□□ 1.59
GABREP78334 AC120057.4-201ENST00000624722 1615 ntBASIC25■■□□□ 1.59
GABREP78334 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
GABREP78334 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
GABREP78334 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.99■■□□□ 1.59
GABREP78334 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.99■■□□□ 1.59
GABREP78334 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.99■■□□□ 1.59
GABREP78334 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
GABREP78334 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
GABREP78334 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
GABREP78334 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
GABREP78334 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
GABREP78334 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
GABREP78334 RNF126P1-201ENST00000567452 1320 ntBASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms