Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCNYL3P0C7X3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCNYL3P0C7X3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCNYL3P0C7X3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCNYL3P0C7X3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
CCNYL3P0C7X3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.26■■□□□ 1.63
CCNYL3P0C7X3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CCNYL3P0C7X3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.25■■□□□ 1.63
CCNYL3P0C7X3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCNYL3P0C7X3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CCNYL3P0C7X3 MIR6090-201ENST00000622481 60 ntBASIC25.23■■□□□ 1.63
CCNYL3P0C7X3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CCNYL3P0C7X3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
CCNYL3P0C7X3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNYL3P0C7X3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCNYL3P0C7X3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCNYL3P0C7X3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.2■■□□□ 1.62
CCNYL3P0C7X3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CCNYL3P0C7X3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCNYL3P0C7X3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.18■■□□□ 1.62
CCNYL3P0C7X3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCNYL3P0C7X3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCNYL3P0C7X3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCNYL3P0C7X3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.17■■□□□ 1.62
CCNYL3P0C7X3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CCNYL3P0C7X3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
CCNYL3P0C7X3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCNYL3P0C7X3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCNYL3P0C7X3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
CCNYL3P0C7X3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCNYL3P0C7X3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCNYL3P0C7X3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.12■■□□□ 1.61
CCNYL3P0C7X3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCNYL3P0C7X3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.12■■□□□ 1.61
CCNYL3P0C7X3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
CCNYL3P0C7X3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
CCNYL3P0C7X3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCNYL3P0C7X3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.09■■□□□ 1.61
CCNYL3P0C7X3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.09■■□□□ 1.61
CCNYL3P0C7X3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCNYL3P0C7X3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
CCNYL3P0C7X3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.08■■□□□ 1.61
CCNYL3P0C7X3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.08■■□□□ 1.61
CCNYL3P0C7X3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.07■■□□□ 1.6
CCNYL3P0C7X3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCNYL3P0C7X3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCNYL3P0C7X3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCNYL3P0C7X3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCNYL3P0C7X3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.05■■□□□ 1.6
CCNYL3P0C7X3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCNYL3P0C7X3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCNYL3P0C7X3 LINC01971-201ENST00000617888 1048 ntBASIC25.04■■□□□ 1.6
CCNYL3P0C7X3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCNYL3P0C7X3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCNYL3P0C7X3 MIR639-201ENST00000384974 98 ntBASIC25.03■■□□□ 1.6
CCNYL3P0C7X3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.03■■□□□ 1.6
CCNYL3P0C7X3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CCNYL3P0C7X3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.02■■□□□ 1.6
CCNYL3P0C7X3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.02■■□□□ 1.6
CCNYL3P0C7X3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.02■■□□□ 1.6
CCNYL3P0C7X3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
CCNYL3P0C7X3 MIR3648-2-201ENST00000581792 180 ntBASIC25.01■■□□□ 1.59
CCNYL3P0C7X3 DUX4L11-201ENST00000611504 1267 ntBASIC25.01■■□□□ 1.59
CCNYL3P0C7X3 DUX4L12-201ENST00000614593 1267 ntBASIC25.01■■□□□ 1.59
CCNYL3P0C7X3 MIR3648-1-201ENST00000615959 180 ntBASIC25.01■■□□□ 1.59
CCNYL3P0C7X3 DUX4L14-201ENST00000621227 1267 ntBASIC25.01■■□□□ 1.59
CCNYL3P0C7X3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.01■■□□□ 1.59
CCNYL3P0C7X3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25■■□□□ 1.59
CCNYL3P0C7X3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25■■□□□ 1.59
CCNYL3P0C7X3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25■■□□□ 1.59
CCNYL3P0C7X3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CCNYL3P0C7X3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CCNYL3P0C7X3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
CCNYL3P0C7X3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.99■■□□□ 1.59
CCNYL3P0C7X3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CCNYL3P0C7X3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CCNYL3P0C7X3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CCNYL3P0C7X3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.98■■□□□ 1.59
CCNYL3P0C7X3 MIR4449-201ENST00000578365 66 ntBASIC24.98■■□□□ 1.59
CCNYL3P0C7X3 AC016575.1-201ENST00000607026 382 ntBASIC24.98■■□□□ 1.59
CCNYL3P0C7X3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CCNYL3P0C7X3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.97■■□□□ 1.59
CCNYL3P0C7X3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.97■■□□□ 1.59
CCNYL3P0C7X3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CCNYL3P0C7X3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CCNYL3P0C7X3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCNYL3P0C7X3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
CCNYL3P0C7X3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCNYL3P0C7X3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.95■■□□□ 1.58
CCNYL3P0C7X3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCNYL3P0C7X3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.95■■□□□ 1.58
CCNYL3P0C7X3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCNYL3P0C7X3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.94■■□□□ 1.58
CCNYL3P0C7X3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCNYL3P0C7X3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.94■■□□□ 1.58
CCNYL3P0C7X3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCNYL3P0C7X3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCNYL3P0C7X3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCNYL3P0C7X3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCNYL3P0C7X3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms