Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CSPG5O95196 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CSPG5O95196 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
CSPG5O95196 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.36■■■□□ 2.13
CSPG5O95196 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.36■■■□□ 2.13
CSPG5O95196 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.36■■■□□ 2.13
CSPG5O95196 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CSPG5O95196 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CSPG5O95196 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.34■■■□□ 2.13
CSPG5O95196 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CSPG5O95196 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CSPG5O95196 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CSPG5O95196 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CSPG5O95196 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CSPG5O95196 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.33■■■□□ 2.13
CSPG5O95196 DUX4L13-201ENST00000554103 1267 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L15-201ENST00000611059 1267 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L23-201ENST00000615195 1269 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L24-201ENST00000617576 1269 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L22-201ENST00000618238 1269 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L20-201ENST00000619712 1269 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L21-201ENST00000622058 1269 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L10-201ENST00000622460 1267 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 DUX4L25-201ENST00000624915 1269 ntBASIC28.32■■■□□ 2.12
CSPG5O95196 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CSPG5O95196 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CSPG5O95196 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CSPG5O95196 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.31■■■□□ 2.12
CSPG5O95196 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.3■■■□□ 2.12
CSPG5O95196 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CSPG5O95196 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.29■■■□□ 2.12
CSPG5O95196 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CSPG5O95196 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.27■■■□□ 2.12
CSPG5O95196 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.27■■■□□ 2.12
CSPG5O95196 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CSPG5O95196 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.26■■■□□ 2.11
CSPG5O95196 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CSPG5O95196 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.25■■■□□ 2.11
CSPG5O95196 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CSPG5O95196 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
CSPG5O95196 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
CSPG5O95196 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.24■■■□□ 2.11
CSPG5O95196 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CSPG5O95196 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
CSPG5O95196 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
CSPG5O95196 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CSPG5O95196 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.22■■■□□ 2.11
CSPG5O95196 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
CSPG5O95196 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
CSPG5O95196 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CSPG5O95196 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.21■■■□□ 2.11
CSPG5O95196 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.2■■■□□ 2.1
CSPG5O95196 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CSPG5O95196 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.18■■■□□ 2.1
CSPG5O95196 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
CSPG5O95196 AC120057.4-201ENST00000624722 1615 ntBASIC28.18■■■□□ 2.1
CSPG5O95196 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CSPG5O95196 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CSPG5O95196 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CSPG5O95196 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
CSPG5O95196 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.16■■■□□ 2.1
CSPG5O95196 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 RARRES2P2-201ENST00000394842 485 ntBASIC28.15■■■□□ 2.1
CSPG5O95196 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CSPG5O95196 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.15■■■□□ 2.1
CSPG5O95196 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CSPG5O95196 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
CSPG5O95196 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.13■■■□□ 2.09
CSPG5O95196 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CSPG5O95196 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CSPG5O95196 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CSPG5O95196 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CSPG5O95196 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
CSPG5O95196 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CSPG5O95196 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.1■■■□□ 2.09
CSPG5O95196 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CSPG5O95196 GPX1-201ENST00000419349 1106 ntBASIC28.09■■■□□ 2.09
CSPG5O95196 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.09■■■□□ 2.09
CSPG5O95196 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.08■■■□□ 2.09
CSPG5O95196 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
CSPG5O95196 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CSPG5O95196 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
CSPG5O95196 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
CSPG5O95196 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CSPG5O95196 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CSPG5O95196 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
CSPG5O95196 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
CSPG5O95196 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.05■■■□□ 2.08
CSPG5O95196 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.05■■■□□ 2.08
CSPG5O95196 ABHD17AP5-201ENST00000580133 923 ntBASIC28.05■■■□□ 2.08
CSPG5O95196 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms